| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is tolB [C]
Identifier: 170077291
GI number: 170077291
Start: 699005
End: 699535
Strand: Direct
Name: tolB [C]
Synonym: SYNPCC7002_A0668
Alternate gene names: 170077291
Gene position: 699005-699535 (Clockwise)
Preceding gene: 170077290
Following gene: 170077293
Centisome position: 23.24
GC content: 51.98
Gene sequence:
>531_bases ATGCCCAGGTCACAATCTTGGCGAATGACCACTAATCCTATGGAAAAGTTTTGGCCGTTGGCGATCGCCACTATGGGATT GATCTTAGGGGGCTGTGGTCGGGCCTTGTTTTATCAGCCCCAGATTGCCACGGGGGGAATTAATAGTAATTTTGCCGAAG AATTTCCGAGCTACAGCGGTGATGGCCGTTATCTCGCCTTTGCCTCAGAACGGGATGGCCGCCGCAATATTTTTCTCTAC GATCTCCAGACTAATCAATTAGTTAACCTGCCTAATCTCAACCGCCGCGACTCTAGCCAAGACCAACCGGATCTCAGTGA AGATGGCCGTTTTATCGCCTATGTTTCCACCGAACGGGGCCGCCAGGATGTATTTGTCTATGACCGCAACCAGGGGCGAT CGCAGTTGTTAACGGTGAATTTGCGGGGGTCGGTACAAAATCCCACCATTAGCGGCGATGGACGTCGGGTCGCTTTTCAG AGCAACGAACGGGGGCAATGGAATTTGATGCTGGTGGACGTGACTCCCTAA
Upstream 100 bases:
>100_bases AGTAAGCGGGTCGAACAACGTTATGGTCGCCCTTGTTCCTTGGCCCTGAGGCAGCTCCAACGTGTTGAACAGAAGGCTAG TATATTCATGGATCAACCCA
Downstream 100 bases:
>100_bases TGGAAACCGGACTGCGCTATGGTCTATAGATCAGAATGATGTTGCCTTGACCGGAGGCGTTTATGGATCGCAGACAGTTG GTCGCGGGCATAGTGAGGGC
Product: putative lipoprotein
Products: NA
Alternate protein names: WD40 Domain Protein Beta Propeller; WD-40-Like Beta Propeller Repeat-Containing Protein; WD40-Like Beta-Propeller Protein; WD40-Like Beta Propeller; Lipoprotein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLY DLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQ SNERGQWNLMLVDVTP
Sequences:
>Translated_176_residues MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLY DLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQ SNERGQWNLMLVDVTP >Mature_175_residues PRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYD LQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQS NERGQWNLMLVDVTP
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3 And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. [C]
COG id: COG0823
COG function: function code U; Periplasmic component of the Tol biopolymer transport system
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19949; Mature: 19817
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSG CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCHHHHCCCCCC DGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERG CCCEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC RQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQWNLMLVDVTP CEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEEEECC >Mature Secondary Structure PRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSG CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCHHHHCCCCCC DGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERG CCCEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC RQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQWNLMLVDVTP CEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA