Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is tolB [C]

Identifier: 170077291

GI number: 170077291

Start: 699005

End: 699535

Strand: Direct

Name: tolB [C]

Synonym: SYNPCC7002_A0668

Alternate gene names: 170077291

Gene position: 699005-699535 (Clockwise)

Preceding gene: 170077290

Following gene: 170077293

Centisome position: 23.24

GC content: 51.98

Gene sequence:

>531_bases
ATGCCCAGGTCACAATCTTGGCGAATGACCACTAATCCTATGGAAAAGTTTTGGCCGTTGGCGATCGCCACTATGGGATT
GATCTTAGGGGGCTGTGGTCGGGCCTTGTTTTATCAGCCCCAGATTGCCACGGGGGGAATTAATAGTAATTTTGCCGAAG
AATTTCCGAGCTACAGCGGTGATGGCCGTTATCTCGCCTTTGCCTCAGAACGGGATGGCCGCCGCAATATTTTTCTCTAC
GATCTCCAGACTAATCAATTAGTTAACCTGCCTAATCTCAACCGCCGCGACTCTAGCCAAGACCAACCGGATCTCAGTGA
AGATGGCCGTTTTATCGCCTATGTTTCCACCGAACGGGGCCGCCAGGATGTATTTGTCTATGACCGCAACCAGGGGCGAT
CGCAGTTGTTAACGGTGAATTTGCGGGGGTCGGTACAAAATCCCACCATTAGCGGCGATGGACGTCGGGTCGCTTTTCAG
AGCAACGAACGGGGGCAATGGAATTTGATGCTGGTGGACGTGACTCCCTAA

Upstream 100 bases:

>100_bases
AGTAAGCGGGTCGAACAACGTTATGGTCGCCCTTGTTCCTTGGCCCTGAGGCAGCTCCAACGTGTTGAACAGAAGGCTAG
TATATTCATGGATCAACCCA

Downstream 100 bases:

>100_bases
TGGAAACCGGACTGCGCTATGGTCTATAGATCAGAATGATGTTGCCTTGACCGGAGGCGTTTATGGATCGCAGACAGTTG
GTCGCGGGCATAGTGAGGGC

Product: putative lipoprotein

Products: NA

Alternate protein names: WD40 Domain Protein Beta Propeller; WD-40-Like Beta Propeller Repeat-Containing Protein; WD40-Like Beta-Propeller Protein; WD40-Like Beta Propeller; Lipoprotein

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLY
DLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQ
SNERGQWNLMLVDVTP

Sequences:

>Translated_176_residues
MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLY
DLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQ
SNERGQWNLMLVDVTP
>Mature_175_residues
PRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYD
LQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQS
NERGQWNLMLVDVTP

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3 And K). Necessary For The Colicins To Reach Their Respective Targets After Initial Binding To The Bacteria. [C]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19949; Mature: 19817

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSG
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCHHHHCCCCCC
DGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERG
CCCEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
RQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQWNLMLVDVTP
CEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEEEECC
>Mature Secondary Structure 
PRSQSWRMTTNPMEKFWPLAIATMGLILGGCGRALFYQPQIATGGINSNFAEEFPSYSG
CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCHHHHCCCCCC
DGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTERG
CCCEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
RQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQWNLMLVDVTP
CEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCCEEEEECCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA