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The map label for this gene is cpdA [H]

Identifier: 170077259

GI number: 170077259

Start: 665536

End: 666303

Strand: Reverse

Name: cpdA [H]

Synonym: SYNPCC7002_A0636

Alternate gene names: 170077259

Gene position: 666303-665536 (Counterclockwise)

Preceding gene: 170077260

Following gene: 170077258

Centisome position: 22.15

GC content: 52.47

Gene sequence:

>768_bases
ATGGTTCTCATTGCCCAGATTACTGATACCCACCTCCTCGATCACCCAGAGGCCGAAATGCGCGGCGTGAAAACCGATGC
CTCTTTTCAAGCAGTCTTAGCGGCGGTGCAACAGTTTAAACCAGATCGGCTGATTTTGACCGGGGATTTGGCCCACCACG
GTGAGGCGATCTCCTACGAAAGGCTACGGGATTTGGTCGAAGCGACCCAGATTCCCAGCTATTGGCTGCCAGGGAACCAC
GACGATCCAGAACTGATGGCCGGGATTTTGCAGGGAGATTATCTTTCGCCAGACAAGAACGTTGCTTTGGGGAACTGGAA
ACTGTTGCTGTTGGATTCGTTTCTTGAGAACCCAGAATATGGCGAGGGTTTTTTAGATACGGCGCAACTGGCCTGGCTCG
CTGAAAGGTTAGAACATCATCAAAATTCTCCGGTGGCGATCGCCATCCATCACCATGTGGTGCCAGCGGGGGTTGATTGG
CTCGATCAAATCGATATGACCAACCGCGCCGAGTTTTGGCAGATTGTGCAACATCATCCCCAGGTAAAAACGGTTTTCTT
TGGTCACGTCCACCTGGAATACAGCGTCACCCAAGGGGGAATTCCTTGCTTTGGTACGCCATCAACTTGTACCCAAGTGA
CGCCCCCGGATCAGGAACCCATCGAAGGCGATCGCCAACTGTGGGAACAACCAGGTTTCCGTCTGTTTGAACTCCATGAT
GATGGTCGCTTCCAGACAAAAGTCCAACGCATTCCGTGGTTTGCGTAG

Upstream 100 bases:

>100_bases
CCCCGCTTACCCTGGAGTGGGGCGCAGGTTCCAGATCGGTGTCAATGCCCAATTCCGTTAAATTGCTCCGTTTCGTCCCC
TATTGTTCCCACGATTTTCC

Downstream 100 bases:

>100_bases
GAGAAAAAACGATGCGTTTCCCCTTCTTGCCACACCGTTCGATTCCTCTGCTGGGCCTGGGTTTATCCCTGTGGCTAGGG
GGTTGTGGCCCGACCCAACA

Product: putative 3',5'-cyclic-nucleotide phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVLIAQITDTHLLDHPEAEMRGVKTDASFQAVLAAVQQFKPDRLILTGDLAHHGEAISYERLRDLVEATQIPSYWLPGNH
DDPELMAGILQGDYLSPDKNVALGNWKLLLLDSFLENPEYGEGFLDTAQLAWLAERLEHHQNSPVAIAIHHHVVPAGVDW
LDQIDMTNRAEFWQIVQHHPQVKTVFFGHVHLEYSVTQGGIPCFGTPSTCTQVTPPDQEPIEGDRQLWEQPGFRLFELHD
DGRFQTKVQRIPWFA

Sequences:

>Translated_255_residues
MVLIAQITDTHLLDHPEAEMRGVKTDASFQAVLAAVQQFKPDRLILTGDLAHHGEAISYERLRDLVEATQIPSYWLPGNH
DDPELMAGILQGDYLSPDKNVALGNWKLLLLDSFLENPEYGEGFLDTAQLAWLAERLEHHQNSPVAIAIHHHVVPAGVDW
LDQIDMTNRAEFWQIVQHHPQVKTVFFGHVHLEYSVTQGGIPCFGTPSTCTQVTPPDQEPIEGDRQLWEQPGFRLFELHD
DGRFQTKVQRIPWFA
>Mature_255_residues
MVLIAQITDTHLLDHPEAEMRGVKTDASFQAVLAAVQQFKPDRLILTGDLAHHGEAISYERLRDLVEATQIPSYWLPGNH
DDPELMAGILQGDYLSPDKNVALGNWKLLLLDSFLENPEYGEGFLDTAQLAWLAERLEHHQNSPVAIAIHHHVVPAGVDW
LDQIDMTNRAEFWQIVQHHPQVKTVFFGHVHLEYSVTQGGIPCFGTPSTCTQVTPPDQEPIEGDRQLWEQPGFRLFELHD
DGRFQTKVQRIPWFA

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=253, Percent_Identity=37.1541501976285, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 28932; Mature: 28932

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLIAQITDTHLLDHPEAEMRGVKTDASFQAVLAAVQQFKPDRLILTGDLAHHGEAISYE
CEEEEEECCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCHH
RLRDLVEATQIPSYWLPGNHDDPELMAGILQGDYLSPDKNVALGNWKLLLLDSFLENPEY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEEHHHHCCCCC
GEGFLDTAQLAWLAERLEHHQNSPVAIAIHHHVVPAGVDWLDQIDMTNRAEFWQIVQHHP
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCC
QVKTVFFGHVHLEYSVTQGGIPCFGTPSTCTQVTPPDQEPIEGDRQLWEQPGFRLFELHD
CEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEC
DGRFQTKVQRIPWFA
CCCHHHHHHCCCCCC
>Mature Secondary Structure
MVLIAQITDTHLLDHPEAEMRGVKTDASFQAVLAAVQQFKPDRLILTGDLAHHGEAISYE
CEEEEEECCCHHCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCHH
RLRDLVEATQIPSYWLPGNHDDPELMAGILQGDYLSPDKNVALGNWKLLLLDSFLENPEY
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCEEEEEEHHHHCCCCC
GEGFLDTAQLAWLAERLEHHQNSPVAIAIHHHVVPAGVDWLDQIDMTNRAEFWQIVQHHP
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCC
QVKTVFFGHVHLEYSVTQGGIPCFGTPSTCTQVTPPDQEPIEGDRQLWEQPGFRLFELHD
CEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEC
DGRFQTKVQRIPWFA
CCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]