| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077256
Identifier: 170077256
GI number: 170077256
Start: 662124
End: 663074
Strand: Reverse
Name: 170077256
Synonym: SYNPCC7002_A0633
Alternate gene names: NA
Gene position: 663074-662124 (Counterclockwise)
Preceding gene: 170077257
Following gene: 170077255
Centisome position: 22.04
GC content: 37.33
Gene sequence:
>951_bases ATGAGCAAGTTACCCAAACGCATTAAATCTCAAAAAATTGGTGTCAGTGCTGCCGATCTATTGAGTTCCGTCTTTGCCAA ATTTTGCAACATTATTCCTGTCCCTCAAGATAGAGATCTCGGCATCGACTTCATCTGTGAAATCATGCAGGGAGAACATC CAACTGGAAAACTATTTAATATTCAGTGTAAAGGTAAAGAAGAAGTAAAAGTAAATGGCAATTCGATAACAGCCTCAATT AAAGTAAGTACTCTCAATTATTGGTTACTTCAATCAAATCCGACATTTCTAATCATTGTTGATTGTCAAAATAACCTATT TTACTGGTCTTTTCCCCAAGATTTTCTTGGTTCTCTTCGTAAAAATTGGCAGCGTCAAAAAAACGTTTCGATTCCAGTTT CCACCGAAAATTGCTTTGAGCAGCATATAAACACTTTGCCAAAACAATTAATCTCGATAGTTAATTCACAAGCATCTGCT ACTCCTAAAAATGGTGATTATCTTGAGACGTTGATACTTGCAGACGCAGTAAATAAAGCTACTAATTATGGATTATCTAT TCTGAGAGCGCCTTTCCACCGACCTTTTCAATATCTTGGAATGCCTTTAGCAGATGCTGCAAGGGCAGTTGGTAGCACGC CTAATGAAGTAGGCAATATTATTGTCGATTCTGAGCAAATTTATATGTTGTTGGAGGCGGAAGGAAATTTCATTAATTAT GTGGATGCCAAGTTAAAAAAGACTTCGCCTTGGAGCATGAAACGTTCATTTGATTCTGAAGCAATTTTGGGAATATTCAG TATCAATCCATCTGAGTTAGAATTAGCTCGAAAGCAAATACATTTCCACACTTATTACGACCACATGAGGAAGTTGAAAA TTGGCGTATCTTGTCAGTATGAAGGTGCACCGCTATCCGTAGGATTTAGCAGTAAATACTACAGAGCGTGA
Upstream 100 bases:
>100_bases ACAGCCAAGTTCAGGTTGCTCTGAGATGTTACTTGCCTGACTTTTCCTTATTCTTAAGGACAGTTAAGTTAAGATTGTGG GGGAAATCTCTAGTATTGTA
Downstream 100 bases:
>100_bases ATTAAGTTTTTAGACTTAGATTTGATACTGTCTAATAATTTGAGTACAGTAGATTGACCAAAGACTCTTGGATAGAATGT ACAAGTATTGATAACTCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSKLPKRIKSQKIGVSAADLLSSVFAKFCNIIPVPQDRDLGIDFICEIMQGEHPTGKLFNIQCKGKEEVKVNGNSITASI KVSTLNYWLLQSNPTFLIIVDCQNNLFYWSFPQDFLGSLRKNWQRQKNVSIPVSTENCFEQHINTLPKQLISIVNSQASA TPKNGDYLETLILADAVNKATNYGLSILRAPFHRPFQYLGMPLADAARAVGSTPNEVGNIIVDSEQIYMLLEAEGNFINY VDAKLKKTSPWSMKRSFDSEAILGIFSINPSELELARKQIHFHTYYDHMRKLKIGVSCQYEGAPLSVGFSSKYYRA
Sequences:
>Translated_316_residues MSKLPKRIKSQKIGVSAADLLSSVFAKFCNIIPVPQDRDLGIDFICEIMQGEHPTGKLFNIQCKGKEEVKVNGNSITASI KVSTLNYWLLQSNPTFLIIVDCQNNLFYWSFPQDFLGSLRKNWQRQKNVSIPVSTENCFEQHINTLPKQLISIVNSQASA TPKNGDYLETLILADAVNKATNYGLSILRAPFHRPFQYLGMPLADAARAVGSTPNEVGNIIVDSEQIYMLLEAEGNFINY VDAKLKKTSPWSMKRSFDSEAILGIFSINPSELELARKQIHFHTYYDHMRKLKIGVSCQYEGAPLSVGFSSKYYRA >Mature_315_residues SKLPKRIKSQKIGVSAADLLSSVFAKFCNIIPVPQDRDLGIDFICEIMQGEHPTGKLFNIQCKGKEEVKVNGNSITASIK VSTLNYWLLQSNPTFLIIVDCQNNLFYWSFPQDFLGSLRKNWQRQKNVSIPVSTENCFEQHINTLPKQLISIVNSQASAT PKNGDYLETLILADAVNKATNYGLSILRAPFHRPFQYLGMPLADAARAVGSTPNEVGNIIVDSEQIYMLLEAEGNFINYV DAKLKKTSPWSMKRSFDSEAILGIFSINPSELELARKQIHFHTYYDHMRKLKIGVSCQYEGAPLSVGFSSKYYRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35556; Mature: 35425
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLPKRIKSQKIGVSAADLLSSVFAKFCNIIPVPQDRDLGIDFICEIMQGEHPTGKLFN CCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE IQCKGKEEVKVNGNSITASIKVSTLNYWLLQSNPTFLIIVDCQNNLFYWSFPQDFLGSLR EEECCCCEEEECCCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCEEEEECCHHHHHHHH KNWQRQKNVSIPVSTENCFEQHINTLPKQLISIVNSQASATPKNGDYLETLILADAVNKA HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH TNYGLSILRAPFHRPFQYLGMPLADAARAVGSTPNEVGNIIVDSEQIYMLLEAEGNFINY HHCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCEEECCCEEEEEEECCCCEEEE VDAKLKKTSPWSMKRSFDSEAILGIFSINPSELELARKQIHFHTYYDHMRKLKIGVSCQY ECCEECCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEE EGAPLSVGFSSKYYRA CCCCEEECCCCCCCCC >Mature Secondary Structure SKLPKRIKSQKIGVSAADLLSSVFAKFCNIIPVPQDRDLGIDFICEIMQGEHPTGKLFN CCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEE IQCKGKEEVKVNGNSITASIKVSTLNYWLLQSNPTFLIIVDCQNNLFYWSFPQDFLGSLR EEECCCCEEEECCCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCEEEEECCHHHHHHHH KNWQRQKNVSIPVSTENCFEQHINTLPKQLISIVNSQASATPKNGDYLETLILADAVNKA HHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH TNYGLSILRAPFHRPFQYLGMPLADAARAVGSTPNEVGNIIVDSEQIYMLLEAEGNFINY HHCCHHHHHHHHCCCHHHHCCCHHHHHHHHCCCCHHHCCEEECCCEEEEEEECCCCEEEE VDAKLKKTSPWSMKRSFDSEAILGIFSINPSELELARKQIHFHTYYDHMRKLKIGVSCQY ECCEECCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEE EGAPLSVGFSSKYYRA CCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA