Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077254

Identifier: 170077254

GI number: 170077254

Start: 661185

End: 661559

Strand: Reverse

Name: 170077254

Synonym: SYNPCC7002_A0631

Alternate gene names: NA

Gene position: 661559-661185 (Counterclockwise)

Preceding gene: 170077255

Following gene: 170077253

Centisome position: 21.99

GC content: 47.73

Gene sequence:

>375_bases
ATGAAACTGCTGCTTGATCAGGGCTTGCCACGTTCTGCGGCAACGTTGCTCAGTGAGGCTGGAATCGATACGATTCACGT
TGCTGAGATTGGTTTGTCGGCAGCAGATGACACCGATATCCTTCAAAGAGCAAAAGATGATGAGCGTGTAGTTGTTACTC
TTGATGCCGACTTCCATGCTTTACTGGCTCTAAGTGAAGCGGCTTCTCCTTCCGTAATTCGCATCCGCATTGAAAGATTG
CGTGCTCAAGCGTTGACCAATCTGCTCTTAAAAGTTCTTGGTGAAGTGACAGAGGATTTGGAACAGGGGGCGATTGTGAC
AGTTGAAACGAGTCGAGTTCGTATGCGCCGTCTCCCATTGATGAAAGAATACTAA

Upstream 100 bases:

>100_bases
TTACAAGAGTTTCCCGAACTGGAAGAGGCTGATATCCAAGAAGCCTTGATTTTTGCCTCCTCTTATTTGGATGATCGCAT
TTTAGAACTACCTCAAAGTG

Downstream 100 bases:

>100_bases
ATTCAACCGTTAAAAGGTTATCACAGGCAAAAAAATAGAAGAATAAAGCGATCGCCCTACATTGATCGTAAGTTACAAGA
ACTTTGAGGGTTTTGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKLLLDQGLPRSAATLLSEAGIDTIHVAEIGLSAADDTDILQRAKDDERVVVTLDADFHALLALSEAASPSVIRIRIERL
RAQALTNLLLKVLGEVTEDLEQGAIVTVETSRVRMRRLPLMKEY

Sequences:

>Translated_124_residues
MKLLLDQGLPRSAATLLSEAGIDTIHVAEIGLSAADDTDILQRAKDDERVVVTLDADFHALLALSEAASPSVIRIRIERL
RAQALTNLLLKVLGEVTEDLEQGAIVTVETSRVRMRRLPLMKEY
>Mature_124_residues
MKLLLDQGLPRSAATLLSEAGIDTIHVAEIGLSAADDTDILQRAKDDERVVVTLDADFHALLALSEAASPSVIRIRIERL
RAQALTNLLLKVLGEVTEDLEQGAIVTVETSRVRMRRLPLMKEY

Specific function: Unknown

COG id: COG4634

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13630; Mature: 13630

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLDQGLPRSAATLLSEAGIDTIHVAEIGLSAADDTDILQRAKDDERVVVTLDADFHA
CCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCHHH
LLALSEAASPSVIRIRIERLRAQALTNLLLKVLGEVTEDLEQGAIVTVETSRVRMRRLPL
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCC
MKEY
CCCC
>Mature Secondary Structure
MKLLLDQGLPRSAATLLSEAGIDTIHVAEIGLSAADDTDILQRAKDDERVVVTLDADFHA
CCCCCCCCCCHHHHHHHHHCCCCEEEHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCHHH
LLALSEAASPSVIRIRIERLRAQALTNLLLKVLGEVTEDLEQGAIVTVETSRVRMRRLPL
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCC
MKEY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA