| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hliA
Identifier: 170077227
GI number: 170077227
Start: 632081
End: 632293
Strand: Reverse
Name: hliA
Synonym: SYNPCC7002_A0602
Alternate gene names: NA
Gene position: 632293-632081 (Counterclockwise)
Preceding gene: 170077232
Following gene: 170077226
Centisome position: 21.02
GC content: 45.54
Gene sequence:
>213_bases ATGGCTAAAAAATACCAAGGCAACATCATCGACGACCAAGGCAAAATGAATACCTTTGCCGTAGAGCCCACCGTTTACGT CCAAGAAAATCCCCGCGTCGGCTTTACCGAATACGCAGAAAAATTCAATGGTCGCGCCGCAATGATCGGTTTTGCTTCTT TACTTCTTCTCGAAATCTTCACCGGCCACGGTGTCATTGGTATTTTTCAGTAA
Upstream 100 bases:
>100_bases GCTTTTGTCAACCTCGAAAAATAAAATGTTGCAAATTGTTACAAAACTTGTTAATCTTGAATCAAGATAAAAAACAACCT AATTTACCCCAGATAAAAAT
Downstream 100 bases:
>100_bases GACCAACAGCTTTTAATTTTTTCAAACAACATCTCAACAGCATAAGTTTGTGTAGGGCGGCCCTTGGTCGTCTTTTTTTT AGCAAATTTCCTTAAAATAG
Product: CAB/ELIP/HLIP superfamily protein
Products: NA
Alternate protein names: CAB/ELIP/HLIP Superfamily Protein; CAB/ELIP/HLIP Family Protein; High Light-Inducible Protein
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MAKKYQGNIIDDQGKMNTFAVEPTVYVQENPRVGFTEYAEKFNGRAAMIGFASLLLLEIFTGHGVIGIFQ
Sequences:
>Translated_70_residues MAKKYQGNIIDDQGKMNTFAVEPTVYVQENPRVGFTEYAEKFNGRAAMIGFASLLLLEIFTGHGVIGIFQ >Mature_69_residues AKKYQGNIIDDQGKMNTFAVEPTVYVQENPRVGFTEYAEKFNGRAAMIGFASLLLLEIFTGHGVIGIFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7787; Mature: 7656
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKYQGNIIDDQGKMNTFAVEPTVYVQENPRVGFTEYAEKFNGRAAMIGFASLLLLEIF CCCCCCCCEECCCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHH TGHGVIGIFQ CCCCEEEEEC >Mature Secondary Structure AKKYQGNIIDDQGKMNTFAVEPTVYVQENPRVGFTEYAEKFNGRAAMIGFASLLLLEIF CCCCCCCEECCCCCCEEEEECCEEEEECCCCCCHHHHHHHHCCCEEHHHHHHHHHHHHH TGHGVIGIFQ CCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA