| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077201
Identifier: 170077201
GI number: 170077201
Start: 600592
End: 601467
Strand: Reverse
Name: 170077201
Synonym: SYNPCC7002_A0576
Alternate gene names: NA
Gene position: 601467-600592 (Counterclockwise)
Preceding gene: 170077207
Following gene: 170077194
Centisome position: 20.0
GC content: 51.6
Gene sequence:
>876_bases ATGTCAGAACCGTTATTTTTAGTTGCGAATTTATTATGCCGAACGCCGACTGCTGTTCATTCGGTCAAGGCGATCGCCCC TCAAACCTGTGTCCAAAGGGCAAGCAATCCAACGGCCACCAACCTTTGGGCAACGGCGACACCGCAATATTTAGCGAGCC CTCGCTTTCGTTCCGGGGCGCAACTCTATACTTTTCGTCTCAATGCTTTATTACGGGGACAGATCCAAACTGCCCTTAAG GCAGGGGCAAGTACCCGGCTATGGACAAATGGCGCGCCCCAACCCACCTATCAGCAGTGGCAACAGCTCCTGAGCCAAGA AGTGCACTTGGCGGCCCAATATCAAGGGCGGCAGTCCCTCGGCATTTTGTTGGGGGATTCCCTGAGCCTCTGGTTTCCCA ATGACCTTTTACCGGCTTCTAAAATTTGGTTAAACCAAGGGATTTCAGGTGAAAATACGAGTCAAATCCTGGCGCGCCTC GGAACGCTTCATGGCCTCCAGGCAGACACGATTTATCTCATGGCCGGAGTCAATGATCTCAAGCAGGGAGTTTCTGAGAC GACGGTACTGAATAATCTGCGGGCAATCATTCGTCAATTGCGCTGCCAACATCCTGAGTCAGTGATCGTCGTACAGTCCC TTTTACCCACGAATCACGGTTATTTACGCAAAGACCGGGCCATTCGTATTAATCAACAACTCCAGGCGATCGCCTCCCAA GAAGGTGTCAACTACCTCAATCTTTATCCTTTATTCACCGACGCTAATGGTGGACTCCGGTCGGAGCTAACCACCGATGG CCTCCACTTGAGCGATGCTGGCTATGCTCAATGGCAGGGAGCTTTACAACGCCTAGAAGATTGTTTGGCCCAATGA
Upstream 100 bases:
>100_bases AACAAACCCCTGAGTCATTAAAGGGTTTATTCTTAACGGATTTATCGGCAACTTTTCGTTTTGGGACAATAATTAGAAGG TGTTTGCCCTGGAAATTGCC
Downstream 100 bases:
>100_bases TTTTTAGGAGTTAAACCCGATAAGATTCCGAGCATCATCCCTAGATTTTTTTAGGCAATTTGGCGGGAAGCCAATTTTTC CAAGTGGAGTTGGGATTCAT
Product: GDSL-like lipase/acylhydrolase domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSEPLFLVANLLCRTPTAVHSVKAIAPQTCVQRASNPTATNLWATATPQYLASPRFRSGAQLYTFRLNALLRGQIQTALK AGASTRLWTNGAPQPTYQQWQQLLSQEVHLAAQYQGRQSLGILLGDSLSLWFPNDLLPASKIWLNQGISGENTSQILARL GTLHGLQADTIYLMAGVNDLKQGVSETTVLNNLRAIIRQLRCQHPESVIVVQSLLPTNHGYLRKDRAIRINQQLQAIASQ EGVNYLNLYPLFTDANGGLRSELTTDGLHLSDAGYAQWQGALQRLEDCLAQ
Sequences:
>Translated_291_residues MSEPLFLVANLLCRTPTAVHSVKAIAPQTCVQRASNPTATNLWATATPQYLASPRFRSGAQLYTFRLNALLRGQIQTALK AGASTRLWTNGAPQPTYQQWQQLLSQEVHLAAQYQGRQSLGILLGDSLSLWFPNDLLPASKIWLNQGISGENTSQILARL GTLHGLQADTIYLMAGVNDLKQGVSETTVLNNLRAIIRQLRCQHPESVIVVQSLLPTNHGYLRKDRAIRINQQLQAIASQ EGVNYLNLYPLFTDANGGLRSELTTDGLHLSDAGYAQWQGALQRLEDCLAQ >Mature_290_residues SEPLFLVANLLCRTPTAVHSVKAIAPQTCVQRASNPTATNLWATATPQYLASPRFRSGAQLYTFRLNALLRGQIQTALKA GASTRLWTNGAPQPTYQQWQQLLSQEVHLAAQYQGRQSLGILLGDSLSLWFPNDLLPASKIWLNQGISGENTSQILARLG TLHGLQADTIYLMAGVNDLKQGVSETTVLNNLRAIIRQLRCQHPESVIVVQSLLPTNHGYLRKDRAIRINQQLQAIASQE GVNYLNLYPLFTDANGGLRSELTTDGLHLSDAGYAQWQGALQRLEDCLAQ
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32052; Mature: 31921
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLFLVANLLCRTPTAVHSVKAIAPQTCVQRASNPTATNLWATATPQYLASPRFRSGA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCC QLYTFRLNALLRGQIQTALKAGASTRLWTNGAPQPTYQQWQQLLSQEVHLAAQYQGRQSL EEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GILLGDSLSLWFPNDLLPASKIWLNQGISGENTSQILARLGTLHGLQADTIYLMAGVNDL EEEECCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHH KQGVSETTVLNNLRAIIRQLRCQHPESVIVVQSLLPTNHGYLRKDRAIRINQQLQAIASQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCEEEHHHHHHHHHHH EGVNYLNLYPLFTDANGGLRSELTTDGLHLSDAGYAQWQGALQRLEDCLAQ CCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEPLFLVANLLCRTPTAVHSVKAIAPQTCVQRASNPTATNLWATATPQYLASPRFRSGA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHCCCCCCCCC QLYTFRLNALLRGQIQTALKAGASTRLWTNGAPQPTYQQWQQLLSQEVHLAAQYQGRQSL EEEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GILLGDSLSLWFPNDLLPASKIWLNQGISGENTSQILARLGTLHGLQADTIYLMAGVNDL EEEECCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHH KQGVSETTVLNNLRAIIRQLRCQHPESVIVVQSLLPTNHGYLRKDRAIRINQQLQAIASQ HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCEEEHHHHHHHHHHH EGVNYLNLYPLFTDANGGLRSELTTDGLHLSDAGYAQWQGALQRLEDCLAQ CCCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA