| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077189
Identifier: 170077189
GI number: 170077189
Start: 592472
End: 593461
Strand: Reverse
Name: 170077189
Synonym: SYNPCC7002_A0564
Alternate gene names: NA
Gene position: 593461-592472 (Counterclockwise)
Preceding gene: 170077190
Following gene: 170077188
Centisome position: 19.73
GC content: 52.83
Gene sequence:
>990_bases ATGGTACGCCGACGTTCTCAACCCTGGATCCATCAGTGGTCCCGCCCTATTATCGGGGCGATCGCCATCATTGGCTTTTT GCTCACCAGTTACCTGACGATCTCCAAACTTTTCGGGGCAGAGGTGGCCTGTGGTACAGAAGCAGCAGCGAGCTGTAGTG ATGTACTCTCTAGTCCCTACGCCTTTGTCTTTGGCTTGCCCTTGTCGCTGTTTGGGGCGATCGCCTATCTCGCCATGGCC GGTTTTTCCCTAGTGCCCCTGGCGATTAATCCCGAAGACAACAAAAAACTGCGGAACAAATACGAAGATTGGACATGGCT CTTTCTCCTCATTGGTGCCACCGCCATGAGCCTGTTTAGTGCCTACCTGATGTACATTCTCTTTGCGAAAATTGGCGGCG TTTGTCTCTACTGCATCACCTCGGCCACCTTTGCCGCGAGTTTTCTGCTATTAACCCTCTTTGGTCGCTTTTGGGACGAT TGGGGTGAAGTGTTCCTGACAATTTTTGTGGTGGCGATAATTACCGCCCTCGGCACCCTCGGCTTATACAACAGCATTGA ACGCGATATCCAAGGCAACGTCCCGGTGCTTAATGACCAGGGCCAAGAAATTATTACCCAAGTCCCCAACCGCGCCCCCG AACCGCCCACAGGCTGGGAAATCACCACTACCTCTGGCCCCGCAGAAATTGCCCTAGCCGAACACCTCACAGAAATTGGG GCGAAAGAATATGGCGCTTACTGGTGTCCCCACTGCTACGACCAAAAACAGTTGTTCGGGAAAGAAGCCTTTGCCAAAGT GCCCTACATTGAATGCGCCCCCGAAGGAGAAAATGGCCAGCCTGATGTTTGTGCCGCCGCTGGGCTAGAAGGATTCCCTA CCTGGGAGATTAATGGGGAACGTTATGCTGGCACTCAACCGCTACAACGTCTGGCAGAGCTTTCTGGCTACCAAGGTTCC ACTGATTTTAAATATGCCTTGCCCCGTTAA
Upstream 100 bases:
>100_bases ATTTTGCCGGAACTGCGCCATTTAGTCAGCCAACTGCAACCCGCCGCCCCGCAGGTTTAAGATGTAGACAATTTATTGCT TGGAATTTTTTTGACGCGCT
Downstream 100 bases:
>100_bases GGAGTGAATGCATTACCCATCAGCTTTTACATCCCTAAAATGCATCACCTGATCTGTCAAGGTCAGGTTTTTTTGTCAAC GATTGGGCTAAAATTTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVRRRSQPWIHQWSRPIIGAIAIIGFLLTSYLTISKLFGAEVACGTEAAASCSDVLSSPYAFVFGLPLSLFGAIAYLAMA GFSLVPLAINPEDNKKLRNKYEDWTWLFLLIGATAMSLFSAYLMYILFAKIGGVCLYCITSATFAASFLLLTLFGRFWDD WGEVFLTIFVVAIITALGTLGLYNSIERDIQGNVPVLNDQGQEIITQVPNRAPEPPTGWEITTTSGPAEIALAEHLTEIG AKEYGAYWCPHCYDQKQLFGKEAFAKVPYIECAPEGENGQPDVCAAAGLEGFPTWEINGERYAGTQPLQRLAELSGYQGS TDFKYALPR
Sequences:
>Translated_329_residues MVRRRSQPWIHQWSRPIIGAIAIIGFLLTSYLTISKLFGAEVACGTEAAASCSDVLSSPYAFVFGLPLSLFGAIAYLAMA GFSLVPLAINPEDNKKLRNKYEDWTWLFLLIGATAMSLFSAYLMYILFAKIGGVCLYCITSATFAASFLLLTLFGRFWDD WGEVFLTIFVVAIITALGTLGLYNSIERDIQGNVPVLNDQGQEIITQVPNRAPEPPTGWEITTTSGPAEIALAEHLTEIG AKEYGAYWCPHCYDQKQLFGKEAFAKVPYIECAPEGENGQPDVCAAAGLEGFPTWEINGERYAGTQPLQRLAELSGYQGS TDFKYALPR >Mature_329_residues MVRRRSQPWIHQWSRPIIGAIAIIGFLLTSYLTISKLFGAEVACGTEAAASCSDVLSSPYAFVFGLPLSLFGAIAYLAMA GFSLVPLAINPEDNKKLRNKYEDWTWLFLLIGATAMSLFSAYLMYILFAKIGGVCLYCITSATFAASFLLLTLFGRFWDD WGEVFLTIFVVAIITALGTLGLYNSIERDIQGNVPVLNDQGQEIITQVPNRAPEPPTGWEITTTSGPAEIALAEHLTEIG AKEYGAYWCPHCYDQKQLFGKEAFAKVPYIECAPEGENGQPDVCAAAGLEGFPTWEINGERYAGTQPLQRLAELSGYQGS TDFKYALPR
Specific function: Unknown
COG id: COG4243
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36136; Mature: 36136
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRRSQPWIHQWSRPIIGAIAIIGFLLTSYLTISKLFGAEVACGTEAAASCSDVLSSPY CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCH AFVFGLPLSLFGAIAYLAMAGFSLVPLAINPEDNKKLRNKYEDWTWLFLLIGATAMSLFS HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYLMYILFAKIGGVCLYCITSATFAASFLLLTLFGRFWDDWGEVFLTIFVVAIITALGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYNSIERDIQGNVPVLNDQGQEIITQVPNRAPEPPTGWEITTTSGPAEIALAEHLTEIG HHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH AKEYGAYWCPHCYDQKQLFGKEAFAKVPYIECAPEGENGQPDVCAAAGLEGFPTWEINGE HHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCCCCCCEEECCC RYAGTQPLQRLAELSGYQGSTDFKYALPR CCCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MVRRRSQPWIHQWSRPIIGAIAIIGFLLTSYLTISKLFGAEVACGTEAAASCSDVLSSPY CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCH AFVFGLPLSLFGAIAYLAMAGFSLVPLAINPEDNKKLRNKYEDWTWLFLLIGATAMSLFS HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AYLMYILFAKIGGVCLYCITSATFAASFLLLTLFGRFWDDWGEVFLTIFVVAIITALGTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYNSIERDIQGNVPVLNDQGQEIITQVPNRAPEPPTGWEITTTSGPAEIALAEHLTEIG HHHHHHHHHHCCCCCEECCCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH AKEYGAYWCPHCYDQKQLFGKEAFAKVPYIECAPEGENGQPDVCAAAGLEGFPTWEINGE HHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCCCCCCEEECCC RYAGTQPLQRLAELSGYQGSTDFKYALPR CCCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA