Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is trpH [C]

Identifier: 170077174

GI number: 170077174

Start: 576633

End: 577325

Strand: Direct

Name: trpH [C]

Synonym: SYNPCC7002_A0549

Alternate gene names: 170077174

Gene position: 576633-577325 (Clockwise)

Preceding gene: 170077173

Following gene: 170077175

Centisome position: 19.17

GC content: 54.69

Gene sequence:

>693_bases
ATGACTTCTACTTTGTCTGTTCCAAGTGCGGCTCAAGATTTGCAAGCGCTCGAAAAGGCTTGGCGCAGTCTAACGGCAAC
CAGTTGCCCCAATCAGTACAACTTCCACATGCATTCGGTCTGTTCCGATGGTCAACTCACCCCAACAGAAATTGTTGACC
AGGCGATCGCCATCGGTCTAAAAGGCTTTGCGATCACTGACCACCACACCATCCACGGCTATCACCAGGCCCAAAGCTAC
CTCAGCCGACAGCAGCAGAATGATACGACACGACCCTTGCCCCACCTCTGGACGGGCATCGAAATTAACGGCATCCTCCT
TGACACCACAGTACATATCCTTGCCTATGGGTTTAACCCCGATCACAGTGCGATCACCCCTTACTTTAACCGGGAAATTC
CGGAAGGCGATCGCGCCGCAGCAGCAGTGATTATTGACGCGATCCATGCCGCTGGAGGCTTAGCTGTTCTGGCGCATCCC
GCCCGTTATCGTCGTCCTGCCACGGAGTTAATCCCGGCAGCAGCATCCCTTAACATTGATGGTGTAGAAGCCTATTACGC
CTACGACAACCCGAAACCCTGGGTGCCTAGCCAAAAACATACCCCGGTGGTGGCTGCCCTTGGCCATCGGCACAATCTAT
GGCTCACCTGCGGCACAGATACCCATGGTCGCAGCCTCCAGCAACGACTTTAG

Upstream 100 bases:

>100_bases
ACAATTTGCAATATCTAATCTTTTTTTCAGGTTTTCTTTACCCTTTTATTACCATCCCGCTCGCCCTTTAAATCTGCGAT
CGCCAAAGATCGCCTTCGCC

Downstream 100 bases:

>100_bases
GGATCGCTGCGAAACTTTGATCCCCGCATAGCAAAATTCTGGCCTAAAATAAACTTACCCAAGGAATATTTTCCTCCTTT
GCCCCCATTAATCCTGCCGC

Product: PHP family metal-dependent phosphoesterase

Products: NA

Alternate protein names: Phosphotransferase Domain-Containing Protein; PHP Domain Protein; PHP Family Metal-Dependent Phosphoesterase; Phosphoesterase PHP-Like; PHP Domain-Containing Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTSTLSVPSAAQDLQALEKAWRSLTATSCPNQYNFHMHSVCSDGQLTPTEIVDQAIAIGLKGFAITDHHTIHGYHQAQSY
LSRQQQNDTTRPLPHLWTGIEINGILLDTTVHILAYGFNPDHSAITPYFNREIPEGDRAAAAVIIDAIHAAGGLAVLAHP
ARYRRPATELIPAAASLNIDGVEAYYAYDNPKPWVPSQKHTPVVAALGHRHNLWLTCGTDTHGRSLQQRL

Sequences:

>Translated_230_residues
MTSTLSVPSAAQDLQALEKAWRSLTATSCPNQYNFHMHSVCSDGQLTPTEIVDQAIAIGLKGFAITDHHTIHGYHQAQSY
LSRQQQNDTTRPLPHLWTGIEINGILLDTTVHILAYGFNPDHSAITPYFNREIPEGDRAAAAVIIDAIHAAGGLAVLAHP
ARYRRPATELIPAAASLNIDGVEAYYAYDNPKPWVPSQKHTPVVAALGHRHNLWLTCGTDTHGRSLQQRL
>Mature_229_residues
TSTLSVPSAAQDLQALEKAWRSLTATSCPNQYNFHMHSVCSDGQLTPTEIVDQAIAIGLKGFAITDHHTIHGYHQAQSYL
SRQQQNDTTRPLPHLWTGIEINGILLDTTVHILAYGFNPDHSAITPYFNREIPEGDRAAAAVIIDAIHAAGGLAVLAHPA
RYRRPATELIPAAASLNIDGVEAYYAYDNPKPWVPSQKHTPVVAALGHRHNLWLTCGTDTHGRSLQQRL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25206; Mature: 25074

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTLSVPSAAQDLQALEKAWRSLTATSCPNQYNFHMHSVCSDGQLTPTEIVDQAIAIGL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
KGFAITDHHTIHGYHQAQSYLSRQQQNDTTRPLPHLWTGIEINGILLDTTVHILAYGFNP
CCEEEECCCEECCHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCEEEEEEEEEEEECCCC
DHSAITPYFNREIPEGDRAAAAVIIDAIHAAGGLAVLAHPARYRRPATELIPAAASLNID
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHCHHHCCCCC
GVEAYYAYDNPKPWVPSQKHTPVVAALGHRHNLWLTCGTDTHGRSLQQRL
CEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHCC
>Mature Secondary Structure 
TSTLSVPSAAQDLQALEKAWRSLTATSCPNQYNFHMHSVCSDGQLTPTEIVDQAIAIGL
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
KGFAITDHHTIHGYHQAQSYLSRQQQNDTTRPLPHLWTGIEINGILLDTTVHILAYGFNP
CCEEEECCCEECCHHHHHHHHHHHHCCCCCCCCCHHCCCEEECCEEEEEEEEEEEECCCC
DHSAITPYFNREIPEGDRAAAAVIIDAIHAAGGLAVLAHPARYRRPATELIPAAASLNID
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCHHHHHCHHHCCCCC
GVEAYYAYDNPKPWVPSQKHTPVVAALGHRHNLWLTCGTDTHGRSLQQRL
CEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA