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The map label for this gene is ydhD [C]

Identifier: 170077170

GI number: 170077170

Start: 573756

End: 574085

Strand: Reverse

Name: ydhD [C]

Synonym: SYNPCC7002_A0545

Alternate gene names: 170077170

Gene position: 574085-573756 (Counterclockwise)

Preceding gene: 170077171

Following gene: 170077169

Centisome position: 19.08

GC content: 43.94

Gene sequence:

>330_bases
ATGTCTTTAACCCCTGAAACCCGCGAAAAAATTGATCAATTGGTCAACAGCAGCAAAATTTTTGTGTTCATGAAGGGCAG
TAAGCTAATGCCCCAATGTGGCTTTTCTAACAACGTTGTGCAAATTTTTAACAGTCTCGGCGTTGAATATCAGACCTTTG
ATGTCCTAGAAGACTACGATGTGCGCCAAGGCATTAAAGAATATTCCAACTGGCCGACGATTCCCCAGGTCTATGTCAAT
GGAGAATTTGTTGGTGGTTCCGATATCATGATCGAGCTTTACAACTCGAAGGAACTCCATGAGATGCTTGAGGTCGCCCT
CGCGTCCTAA

Upstream 100 bases:

>100_bases
CACCCCGGAGAAATGGGCAGAAGTGGGTCAACCCACTTAAACGGTCGGGGAAACAATGTTTTCCTGAACCCTTATCAACC
CATACTATGAGGAAAAATAG

Downstream 100 bases:

>100_bases
GGCGATCGCCTGTTCGAAAACGAAAAATAACTTTGGGAAACAGCGCCACATACCTGTGAAGTCAGAGGCTGTTTCCCTAC
ATTCTGGCCGTCTCAGATAG

Product: glutaredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSLTPETREKIDQLVNSSKIFVFMKGSKLMPQCGFSNNVVQIFNSLGVEYQTFDVLEDYDVRQGIKEYSNWPTIPQVYVN
GEFVGGSDIMIELYNSKELHEMLEVALAS

Sequences:

>Translated_109_residues
MSLTPETREKIDQLVNSSKIFVFMKGSKLMPQCGFSNNVVQIFNSLGVEYQTFDVLEDYDVRQGIKEYSNWPTIPQVYVN
GEFVGGSDIMIELYNSKELHEMLEVALAS
>Mature_108_residues
SLTPETREKIDQLVNSSKIFVFMKGSKLMPQCGFSNNVVQIFNSLGVEYQTFDVLEDYDVRQGIKEYSNWPTIPQVYVNG
EFVGGSDIMIELYNSKELHEMLEVALAS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=97, Percent_Identity=55.6701030927835, Blast_Score=119, Evalue=4e-28,
Organism=Homo sapiens, GI95113651, Length=100, Percent_Identity=53, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1787943, Length=102, Percent_Identity=41.1764705882353, Blast_Score=100, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17556042, Length=99, Percent_Identity=46.4646464646465, Blast_Score=106, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71988153, Length=84, Percent_Identity=48.8095238095238, Blast_Score=105, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71988159, Length=94, Percent_Identity=45.7446808510638, Blast_Score=104, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=111, Percent_Identity=43.2432432432432, Blast_Score=107, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6320303, Length=83, Percent_Identity=48.1927710843374, Blast_Score=94, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6321022, Length=83, Percent_Identity=45.7831325301205, Blast_Score=92, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24642023, Length=99, Percent_Identity=51.5151515151515, Blast_Score=120, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19921242, Length=96, Percent_Identity=47.9166666666667, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 12421; Mature: 12290

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTPETREKIDQLVNSSKIFVFMKGSKLMPQCGFSNNVVQIFNSLGVEYQTFDVLEDYD
CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCH
VRQGIKEYSNWPTIPQVYVNGEFVGGSDIMIELYNSKELHEMLEVALAS
HHHHHHHHCCCCCCCEEEECCEEECCCEEEEEEECCHHHHHHHHHHHCC
>Mature Secondary Structure 
SLTPETREKIDQLVNSSKIFVFMKGSKLMPQCGFSNNVVQIFNSLGVEYQTFDVLEDYD
CCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHCCH
VRQGIKEYSNWPTIPQVYVNGEFVGGSDIMIELYNSKELHEMLEVALAS
HHHHHHHHCCCCCCCEEEECCEEECCCEEEEEEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]