| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077163
Identifier: 170077163
GI number: 170077163
Start: 568393
End: 569742
Strand: Reverse
Name: 170077163
Synonym: SYNPCC7002_A0538
Alternate gene names: NA
Gene position: 569742-568393 (Counterclockwise)
Preceding gene: 170077165
Following gene: 170077162
Centisome position: 18.94
GC content: 52.67
Gene sequence:
>1350_bases ATGAAGACTTTTGCTGAGATGACAACGGGACGCTGGCTCGCCTGCGGGGGCTTGGCACTCTTGATTTTTTTTATGTTTTT GCCGCCGAGTTATTACCTTATGGCCGCCTTCCCTTGGATCTTACTCTGGCAGGGGGGATTCTTACTGTTGGGTCTTGCCC TCTTGGTGATGCTCCGGAAATTTGAGCTGCCTTTTCGTCCCCTAGGCTATGGTTTGGATTGGGGCATTCTCGCGGTGGCG ATCGCCTGCGGACTATCCACCGTATTTGCGCCGTTTAAAGGGGTTGCCCTATTTAATCTTGTCACTGTTTCCGGGTATGG CGTTGTCCTCTATAGTCTCCGAAACCTTGGCGACCTGGGTGTTTGGACTTGGCAAAATCAATGGCGGAGCCTTGTGGGTC TAGGTTTTGGGATTAGTTTCGTGAGTCTCATTGGTTGGTTAATGGCCAATGGCGAGCTAGAACGCAACTCCATTCCCCTG GGCCATCACAACTTTATGGCGGCCTATTTCTGCCTTGTGTTGCCGATGATCTTGAGCTTTGCCCTTGCCCACCGGGGAAA AATGCGGGGCCTGCTCTTGGTGCTGAGTACTCCCCTGCTTTATCTCCTCTACACTTGCTCCTCCCGGGGTGGGTTTGTGG GGTTACTTTTGTGGGCGATCGCCACCATCGCCTTCGTTATTGGCCGCACAAAAGGAAAAAAACGTTTAATCTCCGGCACC ATTGCCCTATTTCTGTTGGGGATCATGGTGACAGCGGGGTTACAACATCCCCGGGTGCAGCGGCTGATTCAAATTAATCT CAGCGATGGCCTACCAACGGTACAGTTCCAGGTGGACGGGGAAACGGAAGACCGCTTATTTATGTGGCAAGCGGGCTTGA ATATTTTGCAAGATCGCCCTCTAACAGGAGTCGGCCCGGGGAATATGTCCCGGGAATATAACCTCTATCGCCCGATCAAT GTCGGCTCCGGCGCCGCTCACATCCAGCAACTCCACAGCAACCCGATCCAACTTCTGGGGGAACTGGGTTTAATTGGTGG CGCGGCGATCGCCTTTTTCTTGGTGCAACTAATTCGGCTCGGTCATCGTATCCATCACCACACAGATAACCCGCAAATCA AACGGTTGCTCTATGGTTTGGGGGGCGGTTGGTTTGCCTACGCCATGGCGACCCTCACTGATTATCAATTAGAAAATATC CCCATCAGCCTTACCCTGACTTTAACGATTATGCTGCTACTGAGCGTCGCGGATCAGGTTTTAAACGAAGCCACTCCCCA ACCCTTGCCCATTCCCGAACGCCGTTTGTGGAGCTTAGGAAGCCTCGCTGGTTTTTGGGGGCTTTGTTAG
Upstream 100 bases:
>100_bases CAGGGGCACCAATGAGAAAATGCGATGGGGGTTGTGCCGAGGAAAACACAATCAGTTTGAACTCATGTTTTGCGTAATAT CGACGAATTAACGGGGATAG
Downstream 100 bases:
>100_bases TTGCGGTGCCCTACAGTGCTGGGATGTATCTTTTTTCGCGGGGACAGACCCTCTGGGCTAACGGCAACCAGAAGCGGCCT TTACCGCAATAAACCGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Polymerase Domain-Containing Protein; O-Antigen Polymerase Family
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKTFAEMTTGRWLACGGLALLIFFMFLPPSYYLMAAFPWILLWQGGFLLLGLALLVMLRKFELPFRPLGYGLDWGILAVA IACGLSTVFAPFKGVALFNLVTVSGYGVVLYSLRNLGDLGVWTWQNQWRSLVGLGFGISFVSLIGWLMANGELERNSIPL GHHNFMAAYFCLVLPMILSFALAHRGKMRGLLLVLSTPLLYLLYTCSSRGGFVGLLLWAIATIAFVIGRTKGKKRLISGT IALFLLGIMVTAGLQHPRVQRLIQINLSDGLPTVQFQVDGETEDRLFMWQAGLNILQDRPLTGVGPGNMSREYNLYRPIN VGSGAAHIQQLHSNPIQLLGELGLIGGAAIAFFLVQLIRLGHRIHHHTDNPQIKRLLYGLGGGWFAYAMATLTDYQLENI PISLTLTLTIMLLLSVADQVLNEATPQPLPIPERRLWSLGSLAGFWGLC
Sequences:
>Translated_449_residues MKTFAEMTTGRWLACGGLALLIFFMFLPPSYYLMAAFPWILLWQGGFLLLGLALLVMLRKFELPFRPLGYGLDWGILAVA IACGLSTVFAPFKGVALFNLVTVSGYGVVLYSLRNLGDLGVWTWQNQWRSLVGLGFGISFVSLIGWLMANGELERNSIPL GHHNFMAAYFCLVLPMILSFALAHRGKMRGLLLVLSTPLLYLLYTCSSRGGFVGLLLWAIATIAFVIGRTKGKKRLISGT IALFLLGIMVTAGLQHPRVQRLIQINLSDGLPTVQFQVDGETEDRLFMWQAGLNILQDRPLTGVGPGNMSREYNLYRPIN VGSGAAHIQQLHSNPIQLLGELGLIGGAAIAFFLVQLIRLGHRIHHHTDNPQIKRLLYGLGGGWFAYAMATLTDYQLENI PISLTLTLTIMLLLSVADQVLNEATPQPLPIPERRLWSLGSLAGFWGLC >Mature_449_residues MKTFAEMTTGRWLACGGLALLIFFMFLPPSYYLMAAFPWILLWQGGFLLLGLALLVMLRKFELPFRPLGYGLDWGILAVA IACGLSTVFAPFKGVALFNLVTVSGYGVVLYSLRNLGDLGVWTWQNQWRSLVGLGFGISFVSLIGWLMANGELERNSIPL GHHNFMAAYFCLVLPMILSFALAHRGKMRGLLLVLSTPLLYLLYTCSSRGGFVGLLLWAIATIAFVIGRTKGKKRLISGT IALFLLGIMVTAGLQHPRVQRLIQINLSDGLPTVQFQVDGETEDRLFMWQAGLNILQDRPLTGVGPGNMSREYNLYRPIN VGSGAAHIQQLHSNPIQLLGELGLIGGAAIAFFLVQLIRLGHRIHHHTDNPQIKRLLYGLGGGWFAYAMATLTDYQLENI PISLTLTLTIMLLLSVADQVLNEATPQPLPIPERRLWSLGSLAGFWGLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49527; Mature: 49527
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFAEMTTGRWLACGGLALLIFFMFLPPSYYLMAAFPWILLWQGGFLLLGLALLVMLRK CCCHHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FELPFRPLGYGLDWGILAVAIACGLSTVFAPFKGVALFNLVTVSGYGVVLYSLRNLGDLG HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC VWTWQNQWRSLVGLGFGISFVSLIGWLMANGELERNSIPLGHHNFMAAYFCLVLPMILSF EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALAHRGKMRGLLLVLSTPLLYLLYTCSSRGGFVGLLLWAIATIAFVIGRTKGKKRLISGT HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IALFLLGIMVTAGLQHPRVQRLIQINLSDGLPTVQFQVDGETEDRLFMWQAGLNILQDRP HHHHHHHHHHHHCCCCHHHHHHEEEEECCCCCEEEEEECCCCCCCEEEEHHCCHHHHCCC LTGVGPGNMSREYNLYRPINVGSGAAHIQQLHSNPIQLLGELGLIGGAAIAFFLVQLIRL CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHRIHHHTDNPQIKRLLYGLGGGWFAYAMATLTDYQLENIPISLTLTLTIMLLLSVADQV HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCEECCCCEEHHHHHHHHHHHHHHHHH LNEATPQPLPIPERRLWSLGSLAGFWGLC HHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTFAEMTTGRWLACGGLALLIFFMFLPPSYYLMAAFPWILLWQGGFLLLGLALLVMLRK CCCHHHHCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FELPFRPLGYGLDWGILAVAIACGLSTVFAPFKGVALFNLVTVSGYGVVLYSLRNLGDLG HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC VWTWQNQWRSLVGLGFGISFVSLIGWLMANGELERNSIPLGHHNFMAAYFCLVLPMILSF EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALAHRGKMRGLLLVLSTPLLYLLYTCSSRGGFVGLLLWAIATIAFVIGRTKGKKRLISGT HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IALFLLGIMVTAGLQHPRVQRLIQINLSDGLPTVQFQVDGETEDRLFMWQAGLNILQDRP HHHHHHHHHHHHCCCCHHHHHHEEEEECCCCCEEEEEECCCCCCCEEEEHHCCHHHHCCC LTGVGPGNMSREYNLYRPINVGSGAAHIQQLHSNPIQLLGELGLIGGAAIAFFLVQLIRL CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH GHRIHHHTDNPQIKRLLYGLGGGWFAYAMATLTDYQLENIPISLTLTLTIMLLLSVADQV HHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCEECCCCEEHHHHHHHHHHHHHHHHH LNEATPQPLPIPERRLWSLGSLAGFWGLC HHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA