| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yhjO [H]
Identifier: 170077159
GI number: 170077159
Start: 565967
End: 567199
Strand: Reverse
Name: yhjO [H]
Synonym: SYNPCC7002_A0534
Alternate gene names: 170077159
Gene position: 567199-565967 (Counterclockwise)
Preceding gene: 170077160
Following gene: 170077154
Centisome position: 18.86
GC content: 54.34
Gene sequence:
>1233_bases ATGGGTAATGCATCAAAAACTTGGCTGCTGGGCCTTGATCGCCAGATCTGGATCCTCGCAGCAGGCCGACTTCTTTCCCA GATTGGCACCGGGTTCACTGCCTTTTATGCGCCAATCTTTTTCGTAAATCAGGTGGGCCTATCAGCAACCCAGGTGGGCC TCGCGTTAGGGAGTGCCTCGGTTTCGGGGGTTGTGGGCCGTTTTTTAGGGGGAACAGGGGCGGATAATCCAGCCTGGGGA CGCAAAAAAACGCTGCTGGCCGCCGCAGGGGTTTCGGCGATCGCCGATGTGGCTTTAGCAACGGCAGATACGTTTTGGCT GTTGGTGCTGGGAAATTTGTTAATGGGCTTGGGGATCGGTTTGTATTGGCCTGCGACAGAAACGGTGGTGGCAGATTTAA CCAGCGGTAGTCAGCGTAATGAAGCCTTTGCCTTGGTGCGCCTGGCGGACAACATTGGCCTCGGTACAGGGGTGATGCTG GGGGGCTTGATCATTGCAACGATTCAAAATTATCGTTTGCTGTTTGTCCTCGATGGCATCAGTTTTGTGGTGTTTTTTGG GGTGATCTGGGTGGCGATCGCCGAAACCTACCAAAGCCACGAAGATGTCCAAGCGGATGGTAATAGCTGGTTAACGGCCC TCCAGGATCAACGGCTGGTAATTTATATGGCCGTCAATGTGATGTTTACGCTGTACATCGCCCAGATCCAAAGCACCGCG CCTTTATACCTCACGAATTTCATTGAATTTTCGCCCCAGGTGATTAGTGGCCTGTTTGCCTGGCATATCGTGTTTGCTTC CGTCTGTCAGTTGCCCATTGCCCGGCGTTTAAATGGCTTGAGCCGACCCCATGCCCTGATGGTTTCCCTCCTGTTATGGG GCATGGGCTTTACGGTGATGTGGGGAGCGGGTATTGGTGCAATTCCGGCCCTGGTGGGGGCGATCGCCAGTCTGGGGATT TTAGCCCTAGCCACCGATGCCTATACCCCAGCCGCTTCTGCTTTAGTGGTTGATCTCGCCCCAGCCTCCCAACGGGGTGT TTACCTCGCACTGAATTCCCAATGTTGGGCGATTGGTTATTTAATTGGGCCACCGATCGGCGGTTGGGCCTTGGATCAGG TGCCGGCGATCGCCCATGGATTTTGGCTGGCGGGGGCAGTGAGTATTGTTCCTTGTCTGTTGACCTTGCGGTACCTCGAA ACCCTTATCACCCACAAAAAAACGGAGGGTTAA
Upstream 100 bases:
>100_bases GTACCGAGGCGTTGGGCCTGCCTCACCCCACTGAAAACGATTTCCAACTCAGGGAACAATAAATTTCACGGTCAACATTT AAGCGCAATTTAAAAATTTC
Downstream 100 bases:
>100_bases CTCCGTTCAATGGTCAATTATTTCCTGTAAATTCACTAAGTCTGAGAAACAAAACTTTCTTCTTCTCCCTGGTGGGTGGT TTTAACCCACTTGAGCCGTT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWG RKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVML GGLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGI LALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLE TLITHKKTEG
Sequences:
>Translated_410_residues MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWG RKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVML GGLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGI LALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLE TLITHKKTEG >Mature_409_residues GNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWGR KKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLG GLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTAP LYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGIL ALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLET LITHKKTEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=318, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43355; Mature: 43224
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSAS CCCCCCEEEEECCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCH VSGVVGRFLGGTGADNPAWGRKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLGGLIIATIQNYRLLFVLDGI EECCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECHH SFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVM CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHH WGAGIGAIPALVGAIASLGILALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGY HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEE LIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLETLITHKKTEG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSAS CCCCCEEEEECCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCH VSGVVGRFLGGTGADNPAWGRKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC LYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLGGLIIATIQNYRLLFVLDGI EECCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECHH SFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVM CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHH WGAGIGAIPALVGAIASLGILALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGY HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEE LIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLETLITHKKTEG EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]