Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yhjO [H]

Identifier: 170077159

GI number: 170077159

Start: 565967

End: 567199

Strand: Reverse

Name: yhjO [H]

Synonym: SYNPCC7002_A0534

Alternate gene names: 170077159

Gene position: 567199-565967 (Counterclockwise)

Preceding gene: 170077160

Following gene: 170077154

Centisome position: 18.86

GC content: 54.34

Gene sequence:

>1233_bases
ATGGGTAATGCATCAAAAACTTGGCTGCTGGGCCTTGATCGCCAGATCTGGATCCTCGCAGCAGGCCGACTTCTTTCCCA
GATTGGCACCGGGTTCACTGCCTTTTATGCGCCAATCTTTTTCGTAAATCAGGTGGGCCTATCAGCAACCCAGGTGGGCC
TCGCGTTAGGGAGTGCCTCGGTTTCGGGGGTTGTGGGCCGTTTTTTAGGGGGAACAGGGGCGGATAATCCAGCCTGGGGA
CGCAAAAAAACGCTGCTGGCCGCCGCAGGGGTTTCGGCGATCGCCGATGTGGCTTTAGCAACGGCAGATACGTTTTGGCT
GTTGGTGCTGGGAAATTTGTTAATGGGCTTGGGGATCGGTTTGTATTGGCCTGCGACAGAAACGGTGGTGGCAGATTTAA
CCAGCGGTAGTCAGCGTAATGAAGCCTTTGCCTTGGTGCGCCTGGCGGACAACATTGGCCTCGGTACAGGGGTGATGCTG
GGGGGCTTGATCATTGCAACGATTCAAAATTATCGTTTGCTGTTTGTCCTCGATGGCATCAGTTTTGTGGTGTTTTTTGG
GGTGATCTGGGTGGCGATCGCCGAAACCTACCAAAGCCACGAAGATGTCCAAGCGGATGGTAATAGCTGGTTAACGGCCC
TCCAGGATCAACGGCTGGTAATTTATATGGCCGTCAATGTGATGTTTACGCTGTACATCGCCCAGATCCAAAGCACCGCG
CCTTTATACCTCACGAATTTCATTGAATTTTCGCCCCAGGTGATTAGTGGCCTGTTTGCCTGGCATATCGTGTTTGCTTC
CGTCTGTCAGTTGCCCATTGCCCGGCGTTTAAATGGCTTGAGCCGACCCCATGCCCTGATGGTTTCCCTCCTGTTATGGG
GCATGGGCTTTACGGTGATGTGGGGAGCGGGTATTGGTGCAATTCCGGCCCTGGTGGGGGCGATCGCCAGTCTGGGGATT
TTAGCCCTAGCCACCGATGCCTATACCCCAGCCGCTTCTGCTTTAGTGGTTGATCTCGCCCCAGCCTCCCAACGGGGTGT
TTACCTCGCACTGAATTCCCAATGTTGGGCGATTGGTTATTTAATTGGGCCACCGATCGGCGGTTGGGCCTTGGATCAGG
TGCCGGCGATCGCCCATGGATTTTGGCTGGCGGGGGCAGTGAGTATTGTTCCTTGTCTGTTGACCTTGCGGTACCTCGAA
ACCCTTATCACCCACAAAAAAACGGAGGGTTAA

Upstream 100 bases:

>100_bases
GTACCGAGGCGTTGGGCCTGCCTCACCCCACTGAAAACGATTTCCAACTCAGGGAACAATAAATTTCACGGTCAACATTT
AAGCGCAATTTAAAAATTTC

Downstream 100 bases:

>100_bases
CTCCGTTCAATGGTCAATTATTTCCTGTAAATTCACTAAGTCTGAGAAACAAAACTTTCTTCTTCTCCCTGGTGGGTGGT
TTTAACCCACTTGAGCCGTT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWG
RKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVML
GGLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA
PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGI
LALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLE
TLITHKKTEG

Sequences:

>Translated_410_residues
MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWG
RKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVML
GGLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA
PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGI
LALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLE
TLITHKKTEG
>Mature_409_residues
GNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSASVSGVVGRFLGGTGADNPAWGR
KKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIGLYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLG
GLIIATIQNYRLLFVLDGISFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTAP
LYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVMWGAGIGAIPALVGAIASLGIL
ALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGYLIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLET
LITHKKTEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081828, Length=318, Percent_Identity=25.4716981132075, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43355; Mature: 43224

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSAS
CCCCCCEEEEECCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCH
VSGVVGRFLGGTGADNPAWGRKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLGGLIIATIQNYRLLFVLDGI
EECCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECHH
SFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC
PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVM
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
WGAGIGAIPALVGAIASLGILALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGY
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEE
LIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLETLITHKKTEG
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GNASKTWLLGLDRQIWILAAGRLLSQIGTGFTAFYAPIFFVNQVGLSATQVGLALGSAS
CCCCCEEEEECCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCH
VSGVVGRFLGGTGADNPAWGRKKTLLAAAGVSAIADVALATADTFWLLVLGNLLMGLGIG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LYWPATETVVADLTSGSQRNEAFALVRLADNIGLGTGVMLGGLIIATIQNYRLLFVLDGI
EECCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECHH
SFVVFFGVIWVAIAETYQSHEDVQADGNSWLTALQDQRLVIYMAVNVMFTLYIAQIQSTA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCC
PLYLTNFIEFSPQVISGLFAWHIVFASVCQLPIARRLNGLSRPHALMVSLLLWGMGFTVM
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHH
WGAGIGAIPALVGAIASLGILALATDAYTPAASALVVDLAPASQRGVYLALNSQCWAIGY
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEEEEE
LIGPPIGGWALDQVPAIAHGFWLAGAVSIVPCLLTLRYLETLITHKKTEG
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]