| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is fabH [H]
Identifier: 170077150
GI number: 170077150
Start: 554254
End: 555258
Strand: Reverse
Name: fabH [H]
Synonym: SYNPCC7002_A0525
Alternate gene names: 170077150
Gene position: 555258-554254 (Counterclockwise)
Preceding gene: 170077151
Following gene: 170077146
Centisome position: 18.46
GC content: 50.25
Gene sequence:
>1005_bases TTGAAATTTGATGGGGCAGGTATTGCCATTACAGGAAGTGGCTCTGCCACACCAAAAGCAGTCATCCATAATGATGATCT GAGTCAGTTGGTAGAGACTTCAGACGAGTGGATTCGCACTAGAACGGGGATCGCAAATCGTCATTTACTTCCAGAAGATA GTAGTTTGAGTGAACTGGCGGCAGAGGCGGCAAAAAAGGCGATCGCCGCCGCCCATTTACACCCAGAAGAAATTGATTTG ATTATCCTGGCGACCTCCACACCGGATGATTTGTTTGGCAGTGCCGGGAAAGTGCAGCAGTTGATCGGCGCGAAAAATGC CACCGCCTTTGATCTGACGGCGGCCTGTTCTGGATTTGTTTTCGGTTTAGTGACAGCAGCCCAATATCTGCGGACAGGCA CCTTTCAAAAAATTGTTGTGATTGGTGCCGATGTGTTGTCCCGGTGGGTAGACTGGGGCGATCGCACCACCTGTGTATTG TTTGGCGATGGTGCTGGAGCCGTGGTTTGTCAGAGCAGTCCCCAGGATCAGTTGCTCGGCTTTGAGATGTACAGCGACGG TAGCCAAAACGAATGCCTGAATCTTGCCTACGACGGGCATCCCAAATATTTAATCCATGATGTGTCAATTCAAAAAGGTG GCTATCGAGCAATCACCATGAATGGGCGCGAGGTCTATCGGTTTGCGGTGGCGAAAGTGCCGGAAGTCATTGAAAAAACC CTATTTCGGGCAGGTCTCACCACAGAAGATATTGATTGGCTCATTCTCCACCAGGCAAACCAACGAATTATTGATGCCGT GGCAAAACGCTTAAAATTGCCCTCAGAAAAGGTAATTGCCAATCTCCAGGAATATGGAAACACTTCGGCGGCTTCGATCC CCATTGCCCTCGATGAAGCGGTGCGGGCTGGCAAAATCAAACCGGGTCAAACGGTAGCCACTTCTGGCTTTGGGGCGGGT CTCTCTTGGGGATCGGCAATCTTTAAATGGGGAATGCCTCATTAG
Upstream 100 bases:
>100_bases CCACACTCTCTGAAGTGGCATCCAGTGCCATGATAGAAAAAAGCGAGTGAATGAATTACTATCAGATGAATCATCTCCGA GGAAGGAAGGGAGTCGAGCA
Downstream 100 bases:
>100_bases TGAAAGAAAAAGGCGATCGCCGCTTTTAAAAAGATTACTTGAGTAAAAATATTACGCTTGGGCAAAACAACAAAACAAGC ATACCAATGCCTAAGAAATT
Product: beta-ketoacyl-acyl carrier protein synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKFDGAGIAITGSGSATPKAVIHNDDLSQLVETSDEWIRTRTGIANRHLLPEDSSLSELAAEAAKKAIAAAHLHPEEIDL IILATSTPDDLFGSAGKVQQLIGAKNATAFDLTAACSGFVFGLVTAAQYLRTGTFQKIVVIGADVLSRWVDWGDRTTCVL FGDGAGAVVCQSSPQDQLLGFEMYSDGSQNECLNLAYDGHPKYLIHDVSIQKGGYRAITMNGREVYRFAVAKVPEVIEKT LFRAGLTTEDIDWLILHQANQRIIDAVAKRLKLPSEKVIANLQEYGNTSAASIPIALDEAVRAGKIKPGQTVATSGFGAG LSWGSAIFKWGMPH
Sequences:
>Translated_334_residues MKFDGAGIAITGSGSATPKAVIHNDDLSQLVETSDEWIRTRTGIANRHLLPEDSSLSELAAEAAKKAIAAAHLHPEEIDL IILATSTPDDLFGSAGKVQQLIGAKNATAFDLTAACSGFVFGLVTAAQYLRTGTFQKIVVIGADVLSRWVDWGDRTTCVL FGDGAGAVVCQSSPQDQLLGFEMYSDGSQNECLNLAYDGHPKYLIHDVSIQKGGYRAITMNGREVYRFAVAKVPEVIEKT LFRAGLTTEDIDWLILHQANQRIIDAVAKRLKLPSEKVIANLQEYGNTSAASIPIALDEAVRAGKIKPGQTVATSGFGAG LSWGSAIFKWGMPH >Mature_334_residues MKFDGAGIAITGSGSATPKAVIHNDDLSQLVETSDEWIRTRTGIANRHLLPEDSSLSELAAEAAKKAIAAAHLHPEEIDL IILATSTPDDLFGSAGKVQQLIGAKNATAFDLTAACSGFVFGLVTAAQYLRTGTFQKIVVIGADVLSRWVDWGDRTTCVL FGDGAGAVVCQSSPQDQLLGFEMYSDGSQNECLNLAYDGHPKYLIHDVSIQKGGYRAITMNGREVYRFAVAKVPEVIEKT LFRAGLTTEDIDWLILHQANQRIIDAVAKRLKLPSEKVIANLQEYGNTSAASIPIALDEAVRAGKIKPGQTVATSGFGAG LSWGSAIFKWGMPH
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=324, Percent_Identity=42.5925925925926, Blast_Score=265, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 35758; Mature: 35758
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFDGAGIAITGSGSATPKAVIHNDDLSQLVETSDEWIRTRTGIANRHLLPEDSSLSELA CCCCCCCEEEECCCCCCCCEEEECCHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHH AEAAKKAIAAAHLHPEEIDLIILATSTPDDLFGSAGKVQQLIGAKNATAFDLTAACSGFV HHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHHH FGLVTAAQYLRTGTFQKIVVIGADVLSRWVDWGDRTTCVLFGDGAGAVVCQSSPQDQLLG HHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCHHHHEE FEMYSDGSQNECLNLAYDGHPKYLIHDVSIQKGGYRAITMNGREVYRFAVAKVPEVIEKT EEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH LFRAGLTTEDIDWLILHQANQRIIDAVAKRLKLPSEKVIANLQEYGNTSAASIPIALDEA HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECEEHHHH VRAGKIKPGQTVATSGFGAGLSWGSAIFKWGMPH HHCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MKFDGAGIAITGSGSATPKAVIHNDDLSQLVETSDEWIRTRTGIANRHLLPEDSSLSELA CCCCCCCEEEECCCCCCCCEEEECCHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCHHHHH AEAAKKAIAAAHLHPEEIDLIILATSTPDDLFGSAGKVQQLIGAKNATAFDLTAACSGFV HHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHCCCHHHHHHHCCCCCCEEEHHHHHHHHH FGLVTAAQYLRTGTFQKIVVIGADVLSRWVDWGDRTTCVLFGDGAGAVVCQSSPQDQLLG HHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEECCCCHHHHEE FEMYSDGSQNECLNLAYDGHPKYLIHDVSIQKGGYRAITMNGREVYRFAVAKVPEVIEKT EEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHH LFRAGLTTEDIDWLILHQANQRIIDAVAKRLKLPSEKVIANLQEYGNTSAASIPIALDEA HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECEEHHHH VRAGKIKPGQTVATSGFGAGLSWGSAIFKWGMPH HHCCCCCCCCEEEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA