| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is pqqL [C]
Identifier: 170077147
GI number: 170077147
Start: 551649
End: 552935
Strand: Direct
Name: pqqL [C]
Synonym: SYNPCC7002_A0522
Alternate gene names: 170077147
Gene position: 551649-552935 (Clockwise)
Preceding gene: 170077144
Following gene: 170077148
Centisome position: 18.34
GC content: 50.19
Gene sequence:
>1287_bases ATGACTTCCATCCTAGTGCCCAGCCCACGCCTCAACCAACCAACGATTAAGACCCTGGCCAATGGGTTGACAATCATTGC CGAACAGGTGCCGGTTGATGCCGTGAGCCTCAATGTGTGGCTCAATGTGGGGTCTGCGGTGGAAGCCAACAGCATTAATG GGATGGCCCATTTCCTGGAGCACATGGTCTTTAAGGGAACGCCCCAAATCGGCAATGGCGAATTTGAACAGCGCATCGAA GCTAAAGGAGCCGTCACCAACGCCGCCACTAGCCAAGAATACACCCACTATTACATTACCTGTGCGCCCCAGGATTTTGC GGAACTTGCGCCCCTGCAACTGGACGTGGTGCTAAATCCTAGCATTCCCGATGCTGCCTTTGAGCGGGAACGCCAGGTGG TGCTCGAAGAAATTCGTCGTTCCGAGGATAATCCCCGCCGTCGTACCTATTTCCGCGCCATTGAAACGGGATTTGAGCGG TTGCCCTACCGTCGTCCGGTGCTCGGCCCTAGTGAGGTGATTGAAAATCTTCAAGCCCAACAAATGCGGGATTTCCACGG CTTTTGGTACCAACCCCAACGGATGACTGCCGCCGTTGCCGGAAATCTAGAAGGCGATCGCCTGATTGAATTAGTTGCCG CAGCCTTCGATAAACTGTATCAATCCCAACCCACAGCAACCGTTCCCACCTTTGACGATCACTCTCCCGAAGCCCCTTTT CAAAATATTGTGCGTCGTCATTATGAAGATGAAGGCCTACAGCAAGCTCGTTTAGTGATGATGTGGCGTGTGCCGGGGCT AACGGATCTCGAAGAAACCTATGCCCTCGACATTTTAGCGACGGTATTAGGGCAAGGTAAAGTTTCGCGCCTCGTGCAGG ATCTCCGGGAAAAAAGAGGTCTGGTGACTCAAATCAGCGTTAGTAACTTCACCCAAAAACAACAGGGCGTTTTCTATATT TCTGCCCAATTACCAAGCGAAAATATTCCCGCCGTAGAAGCGGCGATTCTTGAACAAATTCAAACCATTCGTACCGCTTC TATTTTGCCCAACGAATTAGAGCGGGTGAAAACTCAAGTAGCTAATCGCTTTATTTTGGGGAATGAACGGCCCAGCGATC GCACCAATTTATACGGTTACTATTACTCGCTATTACGGGATCTCGAACCCGCTTTAAATTATCCGGAATTACTCCAAGCC ATTACCCTCGAAACAATTCAAAAATCTGTACAAAAATATCTCAATCCCGAAGCTTACGGAATTGTTACCCTGACGCCACC TGCCTAA
Upstream 100 bases:
>100_bases CCCAAAAACCTGTCCCCAAAAACCTTCTGTAAAAACTCGATGAACAACATTGCGTTAAAGTAAAAACACGGAAAAACTTT GAATTGCCAGCGCTTCGCCC
Downstream 100 bases:
>100_bases ACTTTGAAAGGATGTCAGTCTCTTCTTTAAGAATATTTTGCTTGTTGAAATAAGTTGGTAGTACGGACGATATCCTGAGG GAATAAACCCGTGGGTTAGG
Product: Zn-dependent peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTSILVPSPRLNQPTIKTLANGLTIIAEQVPVDAVSLNVWLNVGSAVEANSINGMAHFLEHMVFKGTPQIGNGEFEQRIE AKGAVTNAATSQEYTHYYITCAPQDFAELAPLQLDVVLNPSIPDAAFERERQVVLEEIRRSEDNPRRRTYFRAIETGFER LPYRRPVLGPSEVIENLQAQQMRDFHGFWYQPQRMTAAVAGNLEGDRLIELVAAAFDKLYQSQPTATVPTFDDHSPEAPF QNIVRRHYEDEGLQQARLVMMWRVPGLTDLEETYALDILATVLGQGKVSRLVQDLREKRGLVTQISVSNFTQKQQGVFYI SAQLPSENIPAVEAAILEQIQTIRTASILPNELERVKTQVANRFILGNERPSDRTNLYGYYYSLLRDLEPALNYPELLQA ITLETIQKSVQKYLNPEAYGIVTLTPPA
Sequences:
>Translated_428_residues MTSILVPSPRLNQPTIKTLANGLTIIAEQVPVDAVSLNVWLNVGSAVEANSINGMAHFLEHMVFKGTPQIGNGEFEQRIE AKGAVTNAATSQEYTHYYITCAPQDFAELAPLQLDVVLNPSIPDAAFERERQVVLEEIRRSEDNPRRRTYFRAIETGFER LPYRRPVLGPSEVIENLQAQQMRDFHGFWYQPQRMTAAVAGNLEGDRLIELVAAAFDKLYQSQPTATVPTFDDHSPEAPF QNIVRRHYEDEGLQQARLVMMWRVPGLTDLEETYALDILATVLGQGKVSRLVQDLREKRGLVTQISVSNFTQKQQGVFYI SAQLPSENIPAVEAAILEQIQTIRTASILPNELERVKTQVANRFILGNERPSDRTNLYGYYYSLLRDLEPALNYPELLQA ITLETIQKSVQKYLNPEAYGIVTLTPPA >Mature_427_residues TSILVPSPRLNQPTIKTLANGLTIIAEQVPVDAVSLNVWLNVGSAVEANSINGMAHFLEHMVFKGTPQIGNGEFEQRIEA KGAVTNAATSQEYTHYYITCAPQDFAELAPLQLDVVLNPSIPDAAFERERQVVLEEIRRSEDNPRRRTYFRAIETGFERL PYRRPVLGPSEVIENLQAQQMRDFHGFWYQPQRMTAAVAGNLEGDRLIELVAAAFDKLYQSQPTATVPTFDDHSPEAPFQ NIVRRHYEDEGLQQARLVMMWRVPGLTDLEETYALDILATVLGQGKVSRLVQDLREKRGLVTQISVSNFTQKQQGVFYIS AQLPSENIPAVEAAILEQIQTIRTASILPNELERVKTQVANRFILGNERPSDRTNLYGYYYSLLRDLEPALNYPELLQAI TLETIQKSVQKYLNPEAYGIVTLTPPA
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI46593007, Length=270, Percent_Identity=29.6296296296296, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI94538354, Length=208, Percent_Identity=32.2115384615385, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI155969707, Length=337, Percent_Identity=24.6290801186944, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI24308013, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1787770, Length=217, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71999683, Length=228, Percent_Identity=29.8245614035088, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17553678, Length=328, Percent_Identity=27.7439024390244, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6323192, Length=221, Percent_Identity=28.9592760180996, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321813, Length=381, Percent_Identity=20.997375328084, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357875, Length=214, Percent_Identity=30.8411214953271, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24646943, Length=214, Percent_Identity=30.8411214953271, Blast_Score=124, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 48227; Mature: 48096
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSILVPSPRLNQPTIKTLANGLTIIAEQVPVDAVSLNVWLNVGSAVEANSINGMAHFLE CCCEECCCCCCCCCHHHHHHCCHHEEHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHH HMVFKGTPQIGNGEFEQRIEAKGAVTNAATSQEYTHYYITCAPQDFAELAPLQLDVVLNP HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHCCCEEEEEEECC SIPDAAFERERQVVLEEIRRSEDNPRRRTYFRAIETGFERLPYRRPVLGPSEVIENLQAQ CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QMRDFHGFWYQPQRMTAAVAGNLEGDRLIELVAAAFDKLYQSQPTATVPTFDDHSPEAPF HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH QNIVRRHYEDEGLQQARLVMMWRVPGLTDLEETYALDILATVLGQGKVSRLVQDLREKRG HHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC LVTQISVSNFTQKQQGVFYISAQLPSENIPAVEAAILEQIQTIRTASILPNELERVKTQV CEEEEEHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ANRFILGNERPSDRTNLYGYYYSLLRDLEPALNYPELLQAITLETIQKSVQKYLNPEAYG HHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IVTLTPPA EEEECCCC >Mature Secondary Structure TSILVPSPRLNQPTIKTLANGLTIIAEQVPVDAVSLNVWLNVGSAVEANSINGMAHFLE CCEECCCCCCCCCHHHHHHCCHHEEHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHH HMVFKGTPQIGNGEFEQRIEAKGAVTNAATSQEYTHYYITCAPQDFAELAPLQLDVVLNP HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHCCCEEEEEEECC SIPDAAFERERQVVLEEIRRSEDNPRRRTYFRAIETGFERLPYRRPVLGPSEVIENLQAQ CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QMRDFHGFWYQPQRMTAAVAGNLEGDRLIELVAAAFDKLYQSQPTATVPTFDDHSPEAPF HHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH QNIVRRHYEDEGLQQARLVMMWRVPGLTDLEETYALDILATVLGQGKVSRLVQDLREKRG HHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC LVTQISVSNFTQKQQGVFYISAQLPSENIPAVEAAILEQIQTIRTASILPNELERVKTQV CEEEEEHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH ANRFILGNERPSDRTNLYGYYYSLLRDLEPALNYPELLQAITLETIQKSVQKYLNPEAYG HHEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEE IVTLTPPA EEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]