| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077135
Identifier: 170077135
GI number: 170077135
Start: 540820
End: 541125
Strand: Direct
Name: 170077135
Synonym: SYNPCC7002_A0510
Alternate gene names: NA
Gene position: 540820-541125 (Clockwise)
Preceding gene: 170077134
Following gene: 170077137
Centisome position: 17.98
GC content: 50.65
Gene sequence:
>306_bases ATGAGCGTAACGTTTTTCTGGCTGGTGGCGATCGCCAGTAATCTTTGTCTAATCGGGGTGAATTATATTCTCTGGCGAAA AGTTCGCCGTTGGCACCAGGATCTGCGCCTCAGTCGGCACCGTTTCGCCCTCAACGAACGCAAAATCAAAATTGTCGTGG AAGATTTAATACAACAAGCGGACGTGATCCCTGCCACCACCCAACAGATCCAGATGAAAAAACAGCAAGGGCAGCAAGTC ATCGCCCAGATTAAGCTGCTCCAACAACTCCTCCGAGCCTTAATTTTCGTGCGGCGTCGCCTCTGA
Upstream 100 bases:
>100_bases TCACCTGGATTTTGCCGGGCCATGGCCGCCGCCACCAGGCCGACAGCGCAACACTTCACCAAGATTTAAAAGCTTGTATT CAGTGGATGGAGTCCGTGGC
Downstream 100 bases:
>100_bases AATTACCTGTTTACAGAGCCTGCAAGTAACCTGTTAACCGAGTTAAAGTGCGCTGATTTTCCGCTGGTGTTCCTACACTG ATCCGCAGGCCGCCCCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSVTFFWLVAIASNLCLIGVNYILWRKVRRWHQDLRLSRHRFALNERKIKIVVEDLIQQADVIPATTQQIQMKKQQGQQV IAQIKLLQQLLRALIFVRRRL
Sequences:
>Translated_101_residues MSVTFFWLVAIASNLCLIGVNYILWRKVRRWHQDLRLSRHRFALNERKIKIVVEDLIQQADVIPATTQQIQMKKQQGQQV IAQIKLLQQLLRALIFVRRRL >Mature_100_residues SVTFFWLVAIASNLCLIGVNYILWRKVRRWHQDLRLSRHRFALNERKIKIVVEDLIQQADVIPATTQQIQMKKQQGQQVI AQIKLLQQLLRALIFVRRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12062; Mature: 11931
Theoretical pI: Translated: 12.13; Mature: 12.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTFFWLVAIASNLCLIGVNYILWRKVRRWHQDLRLSRHRFALNERKIKIVVEDLIQQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVIPATTQQIQMKKQQGQQVIAQIKLLQQLLRALIFVRRRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVTFFWLVAIASNLCLIGVNYILWRKVRRWHQDLRLSRHRFALNERKIKIVVEDLIQQA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVIPATTQQIQMKKQQGQQVIAQIKLLQQLLRALIFVRRRL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA