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The map label for this gene is yycF [H]

Identifier: 170077121

GI number: 170077121

Start: 525613

End: 526416

Strand: Direct

Name: yycF [H]

Synonym: SYNPCC7002_A0496

Alternate gene names: 170077121

Gene position: 525613-526416 (Clockwise)

Preceding gene: 170077120

Following gene: 170077126

Centisome position: 17.47

GC content: 51.37

Gene sequence:

>804_bases
GTGACTTTAATCTCTGTTGCCATCATCGAAGGAAATCCCCACTTGAGATCATTGCTTGGGTGGCATCTTCAACAAGCCAA
CTATGCCATTTACCAAGCAGCAAATCTCAACCAGTCGCGGCGTGTCTTTGAACAGCACATGCCTGCCTTGGTGCTACTAG
ACTCGGAATTACCGGACGGTGATGGCCTCGAACTCTGCCGTTGGTTGCGCCAAAATACCCAGGCCATCATTCTCATCCTG
TCGGCCAAAAATACAGAAAAAGATGTTGTGGCAGGGTTAAAGGCCGGGGCTGATGATTATTTAACGAAGCCCTTCGGGAT
GCAAGAGCTTTTAGCACGGGTAGAAGCCTTGACGCGGCGGATTAGGGCAGTGAGTGCTCCCCTCCAACTTGATTATGGTG
AATTGCGCATTGATCTCGTGCAGCGGCGGGTACAATTCCGAGGTCTGTACATCGATTTAACGCCCCAAGAATTTAGTTTG
TTGTATGTGCTCGCCCAGGCCAACGGGGAACCCCTCAGTCGCTCAGAATTATTGCGGCGGGCATGGCCAGATGCCATTGA
TAACCCCCGTACCATCGACACCCATGTATTATCCCTGCGGAAAAAAATTGAACAGGACCCCCGCCAGCCCAATTTGATTC
AAACGGTACGTAATGTAGGCTATCGCTTCAATCTCGATGGGATTGGGTCTGGTCTCGGCAATGGCAATAATGCAACCTTA
GAACCCTCGCCGACGCCGGCTCGCCCAAGCCACCCAAAACTCAAAACCCGGACCTCCATTCGTGAGCTGGTTAATCAAGG
TTAG

Upstream 100 bases:

>100_bases
ATCGAGTCCAAAGAAACAGTTAAGACGTAACCACGGTTACAATCTGTTGACATTAACTTTGTTAACGTAGGAGCAACAAT
CGCAAGGAAGTCAAACCATC

Downstream 100 bases:

>100_bases
AGGGTCGTCACCAAGGTTCGCTATTGGTGGATTGACGACTTTGGAGGGTTTGCTGGATGACTGACCAAGGAATGGAGTGA
TTGTGGTGGTGGTGCTGGAT

Product: two-component response regulator; transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTLISVAIIEGNPHLRSLLGWHLQQANYAIYQAANLNQSRRVFEQHMPALVLLDSELPDGDGLELCRWLRQNTQAIILIL
SAKNTEKDVVAGLKAGADDYLTKPFGMQELLARVEALTRRIRAVSAPLQLDYGELRIDLVQRRVQFRGLYIDLTPQEFSL
LYVLAQANGEPLSRSELLRRAWPDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNVGYRFNLDGIGSGLGNGNNATL
EPSPTPARPSHPKLKTRTSIRELVNQG

Sequences:

>Translated_267_residues
MTLISVAIIEGNPHLRSLLGWHLQQANYAIYQAANLNQSRRVFEQHMPALVLLDSELPDGDGLELCRWLRQNTQAIILIL
SAKNTEKDVVAGLKAGADDYLTKPFGMQELLARVEALTRRIRAVSAPLQLDYGELRIDLVQRRVQFRGLYIDLTPQEFSL
LYVLAQANGEPLSRSELLRRAWPDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNVGYRFNLDGIGSGLGNGNNATL
EPSPTPARPSHPKLKTRTSIRELVNQG
>Mature_266_residues
TLISVAIIEGNPHLRSLLGWHLQQANYAIYQAANLNQSRRVFEQHMPALVLLDSELPDGDGLELCRWLRQNTQAIILILS
AKNTEKDVVAGLKAGADDYLTKPFGMQELLARVEALTRRIRAVSAPLQLDYGELRIDLVQRRVQFRGLYIDLTPQEFSLL
YVLAQANGEPLSRSELLRRAWPDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNVGYRFNLDGIGSGLGNGNNATLE
PSPTPARPSHPKLKTRTSIRELVNQG

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH, ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF. Binds to the ftsAZ P1 promoter seque

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=37.3333333333333, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=35.9307359307359, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=35.4260089686099, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=35.0649350649351, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=38.6363636363636, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=30.9417040358744, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=33.9366515837104, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=33.4821428571429, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=34.0909090909091, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787229, Length=209, Percent_Identity=31.1004784688995, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=27.8969957081545, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789402, Length=174, Percent_Identity=35.632183908046, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI2367329, Length=173, Percent_Identity=34.6820809248555, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=29.6137339055794, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 29995; Mature: 29864

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLISVAIIEGNPHLRSLLGWHLQQANYAIYQAANLNQSRRVFEQHMPALVLLDSELPDG
CCEEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCC
DGLELCRWLRQNTQAIILILSAKNTEKDVVAGLKAGADDYLTKPFGMQELLARVEALTRR
CHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH
IRAVSAPLQLDYGELRIDLVQRRVQFRGLYIDLTPQEFSLLYVLAQANGEPLSRSELLRR
HHHHCCCCEECHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHH
AWPDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNVGYRFNLDGIGSGLGNGNNATL
HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
EPSPTPARPSHPKLKTRTSIRELVNQG
CCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLISVAIIEGNPHLRSLLGWHLQQANYAIYQAANLNQSRRVFEQHMPALVLLDSELPDG
CEEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCC
DGLELCRWLRQNTQAIILILSAKNTEKDVVAGLKAGADDYLTKPFGMQELLARVEALTRR
CHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHH
IRAVSAPLQLDYGELRIDLVQRRVQFRGLYIDLTPQEFSLLYVLAQANGEPLSRSELLRR
HHHHCCCCEECHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEEEECCCCCCCHHHHHHH
AWPDAIDNPRTIDTHVLSLRKKIEQDPRQPNLIQTVRNVGYRFNLDGIGSGLGNGNNATL
HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCCCCCCCCC
EPSPTPARPSHPKLKTRTSIRELVNQG
CCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 9829949; 10878122 [H]