| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077112
Identifier: 170077112
GI number: 170077112
Start: 518124
End: 518408
Strand: Direct
Name: 170077112
Synonym: SYNPCC7002_A0487
Alternate gene names: NA
Gene position: 518124-518408 (Clockwise)
Preceding gene: 170077111
Following gene: 170077116
Centisome position: 17.22
GC content: 55.09
Gene sequence:
>285_bases ATGACTGTTACCAGCCACCTCCAGCGGCACTCCAAATTATGGGATCGGAAAAAGACCAACCATCATCCCACCGTCCTTGC TCCCAACCGGGGTTTACCGAGCCAGCACCTCACGATACTGCTGGTGCGCTCTTACCGCACCTTTGCACCCTTACCAGATA GATTAGGCGAACCTAATGCTAAGCTTCGGCGGTATGTTTCTGTGGCACTATCCTCACGCTCACGCGCACTGGGCGTTACC CAGCAAGTTTGGTCTTTGGGGAGCCCGGACTTTCCTCAGAGCTGA
Upstream 100 bases:
>100_bases CGGCATCGTAGTGGAGTTGATTTCAAAAAAAGCTCAGGAGAGTTAGACATAAGCCGGGTTCTGTTCTCTTGCAGCGCAAA AGGGCAGTTATCTATCTAGG
Downstream 100 bases:
>100_bases TCTCAATGTCAACCCTGCAACTGCCGCGCTAACTCTCCTAATAGTTAGTGTAGCGGTATTTTATTTCCGGCGTCTATCTT GGAGCTTTTTATAAACATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTVTSHLQRHSKLWDRKKTNHHPTVLAPNRGLPSQHLTILLVRSYRTFAPLPDRLGEPNAKLRRYVSVALSSRSRALGVT QQVWSLGSPDFPQS
Sequences:
>Translated_94_residues MTVTSHLQRHSKLWDRKKTNHHPTVLAPNRGLPSQHLTILLVRSYRTFAPLPDRLGEPNAKLRRYVSVALSSRSRALGVT QQVWSLGSPDFPQS >Mature_93_residues TVTSHLQRHSKLWDRKKTNHHPTVLAPNRGLPSQHLTILLVRSYRTFAPLPDRLGEPNAKLRRYVSVALSSRSRALGVTQ QVWSLGSPDFPQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10664; Mature: 10533
Theoretical pI: Translated: 12.17; Mature: 12.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTSHLQRHSKLWDRKKTNHHPTVLAPNRGLPSQHLTILLVRSYRTFAPLPDRLGEPNA CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCH KLRRYVSVALSSRSRALGVTQQVWSLGSPDFPQS HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TVTSHLQRHSKLWDRKKTNHHPTVLAPNRGLPSQHLTILLVRSYRTFAPLPDRLGEPNA CHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHCCCCCH KLRRYVSVALSSRSRALGVTQQVWSLGSPDFPQS HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA