| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yeaD [H]
Identifier: 170077078
GI number: 170077078
Start: 482024
End: 482920
Strand: Direct
Name: yeaD [H]
Synonym: SYNPCC7002_A0452
Alternate gene names: 170077078
Gene position: 482024-482920 (Clockwise)
Preceding gene: 170077076
Following gene: 170077082
Centisome position: 16.02
GC content: 52.51
Gene sequence:
>897_bases ATGCATCTTGACCAACTCAATCAACAATACGGCCTGCCTGAACTTTCCTTTGGCGATCGCCAACCGGGTTTTCCGGTGAT CAAAATCAAGAATCGGTTTGCCACGGCAGAAATCTCTCTCTATGGCGGACAGGTGCTCTCTTTCCAACCAAGCAACGCCC AGGCCGATCTTTTATTTTTGAGCGATCGCAGTCACTACCAACCAGGAAAAGCGATCCGGGGTGGGATTCCCATCTGTTGG CCCTGGTTTGGGGCAGACCCGGACGGATTAGGGCGAGCAAACCATGGTTTTGCCCGCGATCGCCTCTGGACTGTCCGGCA TACCGAAACCCTCGCCAATGGCGCAACCCGCGTTATTTTAAGCTTGCAAGATGACGAAGAGACCCGCAAAATTTGGGATT ATGCTTTTGAACTGGCGATCGCCGTCACCGTAAGCGAAAGCTTAGATCTCGAACTCACGAGTCATAACCGCGATCAAAGG CCGATGACCATTACCCAAGCTCTCCACACCTACTTCACCATCGGCGACATTCAGCGGGTGAAAGTGCTGGGTCTTGCGGG CCTTGATTACATCGATAAGGTAGACAGCACACAGCAAAAATCACAAATTGGCGAAGTCACGATCCAGGGGGAACTAGACC GCATTTATCAACATACTCCTGCTCACCTCACCATTGAGGATTCTAGCCTGGGGCGACAGATCGAAATCCACAGTCACCAC AGCCAAACCACCATTGTCTGGAACCCTGGGGCCACCAAAACTGCGACGATGAGCGATCTTCCCGATGCTGCTTATCAAAA ATTTCTCTGCGTCGAAACGGCCAATGCTGCCGCCGAGACTATCACCCTCGCTCCCGGCGAACGCTATACCCTCGGTGTTA CTTACCGATTGTTGTGA
Upstream 100 bases:
>100_bases AAGTCGTTCGCTGTCTATTATGCCGGAGTTTTGGGGCGGCAGTGGTAGATTCTGGCCCTGGCAATTTTCACTAAAATGGC AGTAGCGCTCCACAGTTTTT
Downstream 100 bases:
>100_bases GTTATGGATTATGGAAAATTTGGGCTAGTCGGCTTCAACCTGCACCAAAACTACGGTGACGTTATCGGAACCACCGTTAT CTTTAGCCGTTTCAATTAAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL
Sequences:
>Translated_298_residues MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL >Mature_298_residues MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=243, Percent_Identity=37.037037037037, Blast_Score=163, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6323746, Length=279, Percent_Identity=28.673835125448, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI19921284, Length=260, Percent_Identity=35, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI28574481, Length=166, Percent_Identity=33.1325301204819, Blast_Score=102, Evalue=4e-22,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33261; Mature: 33261
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFL CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCEEEEECCCCCCEEEEEE SDRSHYQPGKAIRGGIPICWPWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVIL ECCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEEEE SLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQRPMTITQALHTYFTIGDIQRV EECCCHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHEEECCCEEE KVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH EEEEECCCHHHHHCCCHHHHHHHCEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEECCC SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL CCEEEEECCCCCCCCCHHCCCHHHHHEEEEEECCCCCEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFL CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCEEEEECCCCCCEEEEEE SDRSHYQPGKAIRGGIPICWPWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVIL ECCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEEEE SLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQRPMTITQALHTYFTIGDIQRV EECCCHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHEEECCCEEE KVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH EEEEECCCHHHHHCCCHHHHHHHCEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEECCC SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL CCEEEEECCCCCCCCCHHCCCHHHHHEEEEEECCCCCEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]