Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is yeaD [H]

Identifier: 170077078

GI number: 170077078

Start: 482024

End: 482920

Strand: Direct

Name: yeaD [H]

Synonym: SYNPCC7002_A0452

Alternate gene names: 170077078

Gene position: 482024-482920 (Clockwise)

Preceding gene: 170077076

Following gene: 170077082

Centisome position: 16.02

GC content: 52.51

Gene sequence:

>897_bases
ATGCATCTTGACCAACTCAATCAACAATACGGCCTGCCTGAACTTTCCTTTGGCGATCGCCAACCGGGTTTTCCGGTGAT
CAAAATCAAGAATCGGTTTGCCACGGCAGAAATCTCTCTCTATGGCGGACAGGTGCTCTCTTTCCAACCAAGCAACGCCC
AGGCCGATCTTTTATTTTTGAGCGATCGCAGTCACTACCAACCAGGAAAAGCGATCCGGGGTGGGATTCCCATCTGTTGG
CCCTGGTTTGGGGCAGACCCGGACGGATTAGGGCGAGCAAACCATGGTTTTGCCCGCGATCGCCTCTGGACTGTCCGGCA
TACCGAAACCCTCGCCAATGGCGCAACCCGCGTTATTTTAAGCTTGCAAGATGACGAAGAGACCCGCAAAATTTGGGATT
ATGCTTTTGAACTGGCGATCGCCGTCACCGTAAGCGAAAGCTTAGATCTCGAACTCACGAGTCATAACCGCGATCAAAGG
CCGATGACCATTACCCAAGCTCTCCACACCTACTTCACCATCGGCGACATTCAGCGGGTGAAAGTGCTGGGTCTTGCGGG
CCTTGATTACATCGATAAGGTAGACAGCACACAGCAAAAATCACAAATTGGCGAAGTCACGATCCAGGGGGAACTAGACC
GCATTTATCAACATACTCCTGCTCACCTCACCATTGAGGATTCTAGCCTGGGGCGACAGATCGAAATCCACAGTCACCAC
AGCCAAACCACCATTGTCTGGAACCCTGGGGCCACCAAAACTGCGACGATGAGCGATCTTCCCGATGCTGCTTATCAAAA
ATTTCTCTGCGTCGAAACGGCCAATGCTGCCGCCGAGACTATCACCCTCGCTCCCGGCGAACGCTATACCCTCGGTGTTA
CTTACCGATTGTTGTGA

Upstream 100 bases:

>100_bases
AAGTCGTTCGCTGTCTATTATGCCGGAGTTTTGGGGCGGCAGTGGTAGATTCTGGCCCTGGCAATTTTCACTAAAATGGC
AGTAGCGCTCCACAGTTTTT

Downstream 100 bases:

>100_bases
GTTATGGATTATGGAAAATTTGGGCTAGTCGGCTTCAACCTGCACCAAAACTACGGTGACGTTATCGGAACCACCGTTAT
CTTTAGCCGTTTCAATTAAA

Product: aldose 1-epimerase

Products: NA

Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW
PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR
PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH
SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL

Sequences:

>Translated_298_residues
MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW
PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR
PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH
SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL
>Mature_298_residues
MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFLSDRSHYQPGKAIRGGIPICW
PWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVILSLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQR
PMTITQALHTYFTIGDIQRVKVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH
SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL

Specific function: Unknown

COG id: COG0676

COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87081973, Length=243, Percent_Identity=37.037037037037, Blast_Score=163, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6323746, Length=279, Percent_Identity=28.673835125448, Blast_Score=98, Evalue=2e-21,
Organism=Drosophila melanogaster, GI19921284, Length=260, Percent_Identity=35, Blast_Score=153, Evalue=1e-37,
Organism=Drosophila melanogaster, GI28574481, Length=166, Percent_Identity=33.1325301204819, Blast_Score=102, Evalue=4e-22,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: =5.1.3.15 [H]

Molecular weight: Translated: 33261; Mature: 33261

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFL
CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCEEEEECCCCCCEEEEEE
SDRSHYQPGKAIRGGIPICWPWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVIL
ECCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEEEE
SLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQRPMTITQALHTYFTIGDIQRV
EECCCHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHEEECCCEEE
KVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH
EEEEECCCHHHHHCCCHHHHHHHCEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEECCC
SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL
CCEEEEECCCCCCCCCHHCCCHHHHHEEEEEECCCCCEEEEEECCCCEEEEEEEEEEC
>Mature Secondary Structure
MHLDQLNQQYGLPELSFGDRQPGFPVIKIKNRFATAEISLYGGQVLSFQPSNAQADLLFL
CCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEEEEEEEEECCEEEEECCCCCCEEEEEE
SDRSHYQPGKAIRGGIPICWPWFGADPDGLGRANHGFARDRLWTVRHTETLANGATRVIL
ECCCCCCCCCHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCEEEEE
SLQDDEETRKIWDYAFELAIAVTVSESLDLELTSHNRDQRPMTITQALHTYFTIGDIQRV
EECCCHHHHHHHHHHEEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHEEECCCEEE
KVLGLAGLDYIDKVDSTQQKSQIGEVTIQGELDRIYQHTPAHLTIEDSSLGRQIEIHSHH
EEEEECCCHHHHHCCCHHHHHHHCEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEECCC
SQTTIVWNPGATKTATMSDLPDAAYQKFLCVETANAAAETITLAPGERYTLGVTYRLL
CCEEEEECCCCCCCCCHHCCCHHHHHEEEEEECCCCCEEEEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 9298646; 10493123 [H]