Click here to switch to the map view.

The map label for this gene is ycgM [C]

Identifier: 170077070

GI number: 170077070

Start: 469217

End: 470011

Strand: Direct

Name: ycgM [C]

Synonym: SYNPCC7002_A0444

Alternate gene names: 170077070

Gene position: 469217-470011 (Clockwise)

Preceding gene: 170077068

Following gene: 170077071

Centisome position: 15.6

GC content: 56.1

Gene sequence:

>795_bases
ATGGCGCAACGATATGTTCGGGTTCAAACTCCCCAAGGGCAAGTATTATACGGACTGCTAAAGCTCAACCGTGAAGTGCA
GGTGATCGATGCACCGGCTTGGTTGGGGGGACAACCGACGGGGGAAAGTCTCGCGCCGGATGAGTACCAATTATTGGCCC
CCTGCGCCCCGTCAAAAATTGTTGCGGTGGGTCACAACTATGCCGCCCATGCGGCGGAACTCCAGCAGCCGATTCCGTCG
GAACCAGTGTTATTTTTGAAACCTCCCAGTGCGATTGTGGCCCACCAACAGGGCATTGTGTATCCGGCCCAATGTCAACA
GTTGGAGTTTGAGGGGGAATTGGCCCTTGTAATTGGCGATCGCACCCGCCATTGCTCTGAAGAAGAGGCCCACCGAAAAA
TTTGGGGCTATACCATCGCCAATGATGTGACGGCGCGGGATCTCCAACGGCAAGATGCCCAGTGGACGCGGGCAAAGGGA
TTTGATACGTTCTGTCCCCTCGGCCCTTGGATTGTGCGCGAGCTTAGCCCCGATGCCAAATTGCGCACCTATGTGACGCC
CCTGGGGGAAGAACTCCCTGAACAATCAGACCCAGCCCAGGCCGCCTCGGTGCAGGATATGGTTTTTTCCGTGGCCAAAT
TGGTGAGTTACATCTCCGAAATTATGACCCTGTTGCCCGGTGATGTGATTTTGACGGGCACCCCCGCCGGAGTTCACCCT
GTCCGCATTGGCGATCGCCTGTTGATCACCATCGAAGGGATCGGCGAGCTTGAAAATCCCATCATTGCCCCCTAA

Upstream 100 bases:

>100_bases
AAAAACAGATCATGACTTGGGTCTGAGGGTCTGTCATCGATTGGCGATCGCCACCTTGAGGTGGAGCTTTGTTCTGTGTT
TAGTTGATCAAAATTCATTT

Downstream 100 bases:

>100_bases
GACCCGTCCCCGTCCTCCATTGCTTGTTGTTGACTACCCGTTGCCATGCCCATCGCTAAACGTTTTTTGACCCGTACCTG
TGCTGCTGCCGCCTGTCTCT

Product: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAQRYVRVQTPQGQVLYGLLKLNREVQVIDAPAWLGGQPTGESLAPDEYQLLAPCAPSKIVAVGHNYAAHAAELQQPIPS
EPVLFLKPPSAIVAHQQGIVYPAQCQQLEFEGELALVIGDRTRHCSEEEAHRKIWGYTIANDVTARDLQRQDAQWTRAKG
FDTFCPLGPWIVRELSPDAKLRTYVTPLGEELPEQSDPAQAASVQDMVFSVAKLVSYISEIMTLLPGDVILTGTPAGVHP
VRIGDRLLITIEGIGELENPIIAP

Sequences:

>Translated_264_residues
MAQRYVRVQTPQGQVLYGLLKLNREVQVIDAPAWLGGQPTGESLAPDEYQLLAPCAPSKIVAVGHNYAAHAAELQQPIPS
EPVLFLKPPSAIVAHQQGIVYPAQCQQLEFEGELALVIGDRTRHCSEEEAHRKIWGYTIANDVTARDLQRQDAQWTRAKG
FDTFCPLGPWIVRELSPDAKLRTYVTPLGEELPEQSDPAQAASVQDMVFSVAKLVSYISEIMTLLPGDVILTGTPAGVHP
VRIGDRLLITIEGIGELENPIIAP
>Mature_263_residues
AQRYVRVQTPQGQVLYGLLKLNREVQVIDAPAWLGGQPTGESLAPDEYQLLAPCAPSKIVAVGHNYAAHAAELQQPIPSE
PVLFLKPPSAIVAHQQGIVYPAQCQQLEFEGELALVIGDRTRHCSEEEAHRKIWGYTIANDVTARDLQRQDAQWTRAKGF
DTFCPLGPWIVRELSPDAKLRTYVTPLGEELPEQSDPAQAASVQDMVFSVAKLVSYISEIMTLLPGDVILTGTPAGVHPV
RIGDRLLITIEGIGELENPIIAP

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=227, Percent_Identity=37.8854625550661, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI40786394, Length=227, Percent_Identity=37.8854625550661, Blast_Score=148, Evalue=5e-36,
Organism=Homo sapiens, GI66348062, Length=201, Percent_Identity=39.3034825870647, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI215422413, Length=201, Percent_Identity=39.3034825870647, Blast_Score=136, Evalue=1e-32,
Organism=Homo sapiens, GI13654274, Length=201, Percent_Identity=39.3034825870647, Blast_Score=136, Evalue=2e-32,
Organism=Escherichia coli, GI1787428, Length=201, Percent_Identity=37.8109452736318, Blast_Score=139, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17557057, Length=193, Percent_Identity=37.3056994818653, Blast_Score=125, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324161, Length=227, Percent_Identity=31.2775330396476, Blast_Score=108, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28572127, Length=232, Percent_Identity=35.3448275862069, Blast_Score=138, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24663695, Length=236, Percent_Identity=32.2033898305085, Blast_Score=110, Evalue=7e-25,
Organism=Drosophila melanogaster, GI28571789, Length=204, Percent_Identity=33.8235294117647, Blast_Score=108, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 28897; Mature: 28766

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRYVRVQTPQGQVLYGLLKLNREVQVIDAPAWLGGQPTGESLAPDEYQLLAPCAPSKI
CCCCEEEEECCCCCEEHEEHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEE
VAVGHNYAAHAAELQQPIPSEPVLFLKPPSAIVAHQQGIVYPAQCQQLEFEGELALVIGD
EEECCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHCEEEECCCEEEEECC
RTRHCSEEEAHRKIWGYTIANDVTARDLQRQDAQWTRAKGFDTFCPLGPWIVRELSPDAK
CCCCCCHHHHHHHHHCEECCCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHCCCCCC
LRTYVTPLGEELPEQSDPAQAASVQDMVFSVAKLVSYISEIMTLLPGDVILTGTPAGVHP
EEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCE
VRIGDRLLITIEGIGELENPIIAP
EEECCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AQRYVRVQTPQGQVLYGLLKLNREVQVIDAPAWLGGQPTGESLAPDEYQLLAPCAPSKI
CCCEEEEECCCCCEEHEEHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEE
VAVGHNYAAHAAELQQPIPSEPVLFLKPPSAIVAHQQGIVYPAQCQQLEFEGELALVIGD
EEECCCCHHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHCEEEECCCEEEEECC
RTRHCSEEEAHRKIWGYTIANDVTARDLQRQDAQWTRAKGFDTFCPLGPWIVRELSPDAK
CCCCCCHHHHHHHHHCEECCCCCHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHCCCCCC
LRTYVTPLGEELPEQSDPAQAASVQDMVFSVAKLVSYISEIMTLLPGDVILTGTPAGVHP
EEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCE
VRIGDRLLITIEGIGELENPIIAP
EEECCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]