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The map label for this gene is yrbE [H]

Identifier: 170077064

GI number: 170077064

Start: 463604

End: 464677

Strand: Direct

Name: yrbE [H]

Synonym: SYNPCC7002_A0436

Alternate gene names: 170077064

Gene position: 463604-464677 (Clockwise)

Preceding gene: 170077063

Following gene: 170077065

Centisome position: 15.41

GC content: 52.33

Gene sequence:

>1074_bases
ATGGCCCAACTACAGTCCAGTCTATCCCCCAATACGAATCTCAGAATCGGCGTGATTGGCGTAGGCAACATGGGGCAACA
CCACACCCGTGTCCTTAGCCTCCTCAAAGATGTTGAACTCATTGGCGTCGCGGATCTCAACGTTGAACGCGGCTTAGACC
TCGCCAGTAAATATCGCATCCGTTACTTTGAGGACTACCACGCCCTACTGCCCCTCGTCGATGCGGTTTGCATTGCGGTT
CCTACCAAGCTCCATTACCAAGTGGGCCTAGAGTGCATGGCAGCGGGCAAACACGTGATGATCGAAAAACCCATTGCGGC
GAGTATTAGTGAAGCCGAAGCCCTCGTCAATGCAGCCGCCGAACATAACGTGATCCTCCAAGTTGGCCACATCGAACGGT
TTAATCCCGCCTTCCAAGAACTGAGTAAAGTGCTCAAAACCGAAAAGCTCTTGGCGATCGAAGCCCATCGCATGAGTCCC
TATTCCCAACGGGCAAATGATGTTTCCGTCGTCTTGGATTTAATGATCCATGACATTGACCTGCTCCTAGAAATGGCAGC
TTCTCCGGTGGTCCAACTGACAGCCACGGGTTCAAAAAAAGACGATTCTAACCACTTAGATTACGTAACGGCCACCTTAA
ATTTCGCCAATGGCATCGTGGCCACCCTCACGGCAAGCAAAGTCACCCACCGCAAAATCCGCACGATCGCCGCCCACTGC
CAGAATTCCCTCACCGAAGCCGATTTTCTCAATAACGAGATCGAAATTCACCGCCAAACCACCGCCAATTACACCACCGA
CTATGGCCAAGTTCTTTATCGTCAGGATGGTTTGATCGAGCAGGTTTACACCAGTAATATCGAACCGCTCCACGCCGAAC
TCGAACATTTCGTTCAATGTGTCCGGGGGGGCGAACAACCTTCCGTCGGGGGAGAACAGGCGTTAAAAGCCCTCCGCCTT
GCGAGCTTGATTGAACAAAGCGCCCTGGATGGCAAAGTCTGGAAAGAGGCTGATCGCCATTACCAACACCTCAATAAGCC
GAAGACCATCGTCACGCCCCTCTCCGTTTCTTGA

Upstream 100 bases:

>100_bases
CTCCGGACATCCGTGCTACCATCGGTAGTCAAAAAGGTGGCGAGGCAACATCATCCCTCATCATCTGCGGTGGAGGAGTT
CAAGGAGTTTCCTAAATCTT

Downstream 100 bases:

>100_bases
TATTTTGCGTTTTCGATGCGTGAAGGGGCGCAGTTTTCGCTACCCTTAATAGATAAATAATCATCCTTTGACTTTAGCGG
GTAAGGAGCCGCTGCACTGA

Product: NADH-dependent dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAQLQSSLSPNTNLRIGVIGVGNMGQHHTRVLSLLKDVELIGVADLNVERGLDLASKYRIRYFEDYHALLPLVDAVCIAV
PTKLHYQVGLECMAAGKHVMIEKPIAASISEAEALVNAAAEHNVILQVGHIERFNPAFQELSKVLKTEKLLAIEAHRMSP
YSQRANDVSVVLDLMIHDIDLLLEMAASPVVQLTATGSKKDDSNHLDYVTATLNFANGIVATLTASKVTHRKIRTIAAHC
QNSLTEADFLNNEIEIHRQTTANYTTDYGQVLYRQDGLIEQVYTSNIEPLHAELEHFVQCVRGGEQPSVGGEQALKALRL
ASLIEQSALDGKVWKEADRHYQHLNKPKTIVTPLSVS

Sequences:

>Translated_357_residues
MAQLQSSLSPNTNLRIGVIGVGNMGQHHTRVLSLLKDVELIGVADLNVERGLDLASKYRIRYFEDYHALLPLVDAVCIAV
PTKLHYQVGLECMAAGKHVMIEKPIAASISEAEALVNAAAEHNVILQVGHIERFNPAFQELSKVLKTEKLLAIEAHRMSP
YSQRANDVSVVLDLMIHDIDLLLEMAASPVVQLTATGSKKDDSNHLDYVTATLNFANGIVATLTASKVTHRKIRTIAAHC
QNSLTEADFLNNEIEIHRQTTANYTTDYGQVLYRQDGLIEQVYTSNIEPLHAELEHFVQCVRGGEQPSVGGEQALKALRL
ASLIEQSALDGKVWKEADRHYQHLNKPKTIVTPLSVS
>Mature_356_residues
AQLQSSLSPNTNLRIGVIGVGNMGQHHTRVLSLLKDVELIGVADLNVERGLDLASKYRIRYFEDYHALLPLVDAVCIAVP
TKLHYQVGLECMAAGKHVMIEKPIAASISEAEALVNAAAEHNVILQVGHIERFNPAFQELSKVLKTEKLLAIEAHRMSPY
SQRANDVSVVLDLMIHDIDLLLEMAASPVVQLTATGSKKDDSNHLDYVTATLNFANGIVATLTASKVTHRKIRTIAAHCQ
NSLTEADFLNNEIEIHRQTTANYTTDYGQVLYRQDGLIEQVYTSNIEPLHAELEHFVQCVRGGEQPSVGGEQALKALRLA
SLIEQSALDGKVWKEADRHYQHLNKPKTIVTPLSVS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=323, Percent_Identity=26.3157894736842, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI87082405, Length=228, Percent_Identity=26.3157894736842, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 39389; Mature: 39257

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLQSSLSPNTNLRIGVIGVGNMGQHHTRVLSLLKDVELIGVADLNVERGLDLASKYRI
CCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHH
RYFEDYHALLPLVDAVCIAVPTKLHYQVGLECMAAGKHVMIEKPIAASISEAEALVNAAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
EHNVILQVGHIERFNPAFQELSKVLKTEKLLAIEAHRMSPYSQRANDVSVVLDLMIHDID
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEHHHHCCCHHHCCCHHHHHHHHHHHHHH
LLLEMAASPVVQLTATGSKKDDSNHLDYVTATLNFANGIVATLTASKVTHRKIRTIAAHC
HHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHH
QNSLTEADFLNNEIEIHRQTTANYTTDYGQVLYRQDGLIEQVYTSNIEPLHAELEHFVQC
HHCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH
VRGGEQPSVGGEQALKALRLASLIEQSALDGKVWKEADRHYQHLNKPKTIVTPLSVS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure 
AQLQSSLSPNTNLRIGVIGVGNMGQHHTRVLSLLKDVELIGVADLNVERGLDLASKYRI
CCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCHHHCCCHHHHHHH
RYFEDYHALLPLVDAVCIAVPTKLHYQVGLECMAAGKHVMIEKPIAASISEAEALVNAAA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHH
EHNVILQVGHIERFNPAFQELSKVLKTEKLLAIEAHRMSPYSQRANDVSVVLDLMIHDID
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEHHHHCCCHHHCCCHHHHHHHHHHHHHH
LLLEMAASPVVQLTATGSKKDDSNHLDYVTATLNFANGIVATLTASKVTHRKIRTIAAHC
HHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEHHCCCEEEEHHHHHHHHHHHHHHHHHH
QNSLTEADFLNNEIEIHRQTTANYTTDYGQVLYRQDGLIEQVYTSNIEPLHAELEHFVQC
HHCCHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHH
VRGGEQPSVGGEQALKALRLASLIEQSALDGKVWKEADRHYQHLNKPKTIVTPLSVS
HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]