| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is crp [C]
Identifier: 170077007
GI number: 170077007
Start: 404115
End: 404678
Strand: Direct
Name: crp [C]
Synonym: SYNPCC7002_A0379
Alternate gene names: 170077007
Gene position: 404115-404678 (Clockwise)
Preceding gene: 170077006
Following gene: 170077008
Centisome position: 13.43
GC content: 45.57
Gene sequence:
>564_bases ATGCAGAAAGTATTATTTCTGTTTGGAGAATTAAATGATGATGATATTGACTGGCTTATCACTGCCGGTAAGATTGCCAA AATTCCACCGCAAACAGTTTTAATCCAGGAAAATCAACCCCTGGAAAATTTCTACATTCTCCTCGATGGCTCGGTATCGG TTTTCATTGACCTCATGGGAGTGACAAAGGATATTGCGGTGCTCCAGAGTGGGGAAGTTTTTGGGGAACTGTCTTTTATT GATCAGCAGTTACCCAGTGCCAGTGTCAAAACCTGTGGTGAATGCTTATTACTGGCCGTATCCCAAGACAAAATTTCCGA CCGCCTGAATCAAGATATTGGCTTTTCGGCGCGATTTAATCGGGCGATCGCCACTTTTTTAGCGAGTCGTCTTCGGAATA CGGTGCGTCACCTCGGCGAGGATAAAGATTTTGTGTTTAATCAAAGTCGCGCTACCGAAGCCGTGCCCAGCATGATTCAA GAAAATCTCAATGTCGCTACCACCCGCTTTGATTGGTTGCTGCGCCGGGTACAATCCCAAACGGTGCCGGAAAATCCTGT TTAA
Upstream 100 bases:
>100_bases CAAAAAATCTTGTTACACATCGCCGCAGCGGTCTAAGTCCCTTGGAAATCCGGGGTAAAATAACCACAGACCGCACCATT CGTGCTAAAGGACATTGGCA
Downstream 100 bases:
>100_bases CGCTCTCCGCCAGGTAAAAGCAGTTTGAAGTATGGTGTGATAGAAATTTTAGAATCTTATGGTCATGGGCTATTGGTACG CGGGGGCTTGGTACGAGGGG
Product: signal transduction protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ ENLNVATTRFDWLLRRVQSQTVPENPV
Sequences:
>Translated_187_residues MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ ENLNVATTRFDWLLRRVQSQTVPENPV >Mature_187_residues MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ ENLNVATTRFDWLLRRVQSQTVPENPV
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20961; Mature: 20961
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMG CCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEHHHHH VTKDIAVLQSGEVFGELSFIDQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFN HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECHHHHHHHHCCCCCCCHHHH RAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQENLNVATTRFDWLLRRVQSQ HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TVPENPV CCCCCCC >Mature Secondary Structure MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMG CCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEHHHHH VTKDIAVLQSGEVFGELSFIDQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFN HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECHHHHHHHHCCCCCCCHHHH RAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQENLNVATTRFDWLLRRVQSQ HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TVPENPV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA