Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is crp [C]

Identifier: 170077007

GI number: 170077007

Start: 404115

End: 404678

Strand: Direct

Name: crp [C]

Synonym: SYNPCC7002_A0379

Alternate gene names: 170077007

Gene position: 404115-404678 (Clockwise)

Preceding gene: 170077006

Following gene: 170077008

Centisome position: 13.43

GC content: 45.57

Gene sequence:

>564_bases
ATGCAGAAAGTATTATTTCTGTTTGGAGAATTAAATGATGATGATATTGACTGGCTTATCACTGCCGGTAAGATTGCCAA
AATTCCACCGCAAACAGTTTTAATCCAGGAAAATCAACCCCTGGAAAATTTCTACATTCTCCTCGATGGCTCGGTATCGG
TTTTCATTGACCTCATGGGAGTGACAAAGGATATTGCGGTGCTCCAGAGTGGGGAAGTTTTTGGGGAACTGTCTTTTATT
GATCAGCAGTTACCCAGTGCCAGTGTCAAAACCTGTGGTGAATGCTTATTACTGGCCGTATCCCAAGACAAAATTTCCGA
CCGCCTGAATCAAGATATTGGCTTTTCGGCGCGATTTAATCGGGCGATCGCCACTTTTTTAGCGAGTCGTCTTCGGAATA
CGGTGCGTCACCTCGGCGAGGATAAAGATTTTGTGTTTAATCAAAGTCGCGCTACCGAAGCCGTGCCCAGCATGATTCAA
GAAAATCTCAATGTCGCTACCACCCGCTTTGATTGGTTGCTGCGCCGGGTACAATCCCAAACGGTGCCGGAAAATCCTGT
TTAA

Upstream 100 bases:

>100_bases
CAAAAAATCTTGTTACACATCGCCGCAGCGGTCTAAGTCCCTTGGAAATCCGGGGTAAAATAACCACAGACCGCACCATT
CGTGCTAAAGGACATTGGCA

Downstream 100 bases:

>100_bases
CGCTCTCCGCCAGGTAAAAGCAGTTTGAAGTATGGTGTGATAGAAATTTTAGAATCTTATGGTCATGGGCTATTGGTACG
CGGGGGCTTGGTACGAGGGG

Product: signal transduction protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI
DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ
ENLNVATTRFDWLLRRVQSQTVPENPV

Sequences:

>Translated_187_residues
MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI
DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ
ENLNVATTRFDWLLRRVQSQTVPENPV
>Mature_187_residues
MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMGVTKDIAVLQSGEVFGELSFI
DQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFNRAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQ
ENLNVATTRFDWLLRRVQSQTVPENPV

Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20961; Mature: 20961

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMG
CCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEHHHHH
VTKDIAVLQSGEVFGELSFIDQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFN
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECHHHHHHHHCCCCCCCHHHH
RAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQENLNVATTRFDWLLRRVQSQ
HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TVPENPV
CCCCCCC
>Mature Secondary Structure
MQKVLFLFGELNDDDIDWLITAGKIAKIPPQTVLIQENQPLENFYILLDGSVSVFIDLMG
CCCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEHHHHH
VTKDIAVLQSGEVFGELSFIDQQLPSASVKTCGECLLLAVSQDKISDRLNQDIGFSARFN
HHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHEEEECHHHHHHHHCCCCCCCHHHH
RAIATFLASRLRNTVRHLGEDKDFVFNQSRATEAVPSMIQENLNVATTRFDWLLRRVQSQ
HHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
TVPENPV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA