| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076985
Identifier: 170076985
GI number: 170076985
Start: 376744
End: 377931
Strand: Direct
Name: 170076985
Synonym: SYNPCC7002_A0357
Alternate gene names: NA
Gene position: 376744-377931 (Clockwise)
Preceding gene: 170076984
Following gene: 170076986
Centisome position: 12.52
GC content: 49.58
Gene sequence:
>1188_bases ATGGTTGCCCCGTCGCAAATTACCGTTACTTGGCACAGTGAAATCGCGGAAATCCCCAAAGCTGCCTGGGATGCGATCGC CGCGCCATTGAAAACCCCTTTTTTAGAATGGGATTGGCTCCACAATATTGAACTGTCTGGCAGTGTCGGCCCTCGGACGG GCTGGCAACCCTGCCATCTCTCGGTGCAGCGGGATGGAGAATTTATTGCCATGGCCCCCCTCTACATCAAAGGCCACAGC TACGGCGAATTTGTCTTTGACCACCAATGGGCCGATCTGTCCTACCGCCTGGGCCACGAATATTACCCAAAACTCGTGGG GATGACCCCCTTCACGCCCGCCGTGGGCTACCGCTTTCTCATTGCCCCCGGCGAAGATGAATTGACCCTCTCCCAGGTCA TGGTCGCTGCCATTGATCAATTTTGCGATCGCCAACAGCTTTCCGGCTGTAATTTTCTGTTTGTCGATCCCACCTGGCAA AAAACCATGGAACAACTCGGCTTCCGAGCTTGGCTCCACCATGGTTATATCTGGAGTAACCAGAATTTCGACAACTTCGA CGACTATCTCGGTGCTTTTACCTCCAACCAACGCAAAAACATTAAGCGCGAACGCAAAGCCGTTGACAAAGCAGGTTTAT CCCTCAAGATGATGACCGGGGACGAAATTCCCGCCCATTACTTCCCACTCATTTATCGTTTCTATAGCAGCACCTGCGAC AAATTTTTTTGGGGGAGTAAATATCTCCGGAAACCCTTTTTTGAAACCCTAGAATCTACCTATCGCCATCGCGTTGTTCT GGCCGCCGCTTACACGCCAGAAGATGACAAACATCCCGTCGGTTTATCTTTTTGTATCCGTAAAGATGATTATCTTTATG GTCGTTATTGGGGGGCCTTTGATGAATATGACTGTCTCCATTTTGAAGCCTGCTATTACAAACCGATCCAATGGGCAATC GAGCAGGGAATTACGATGTACGATCCGGGCGCTGGCGGAAAACATAAGCGACGACGTGGTTTCCCGGCAACCCCAAACTA TAGCCTCCACCGTTTTTATCAACCCCGCATGGGCCAAGTTTTAGACGCTTATATTGATGAAATTAATGCCATGGAGCAAC AGGAAATTGAAGCGATCAATGCGGATATTCCCTTTAAACGGCAGGAAGTTCAATTGAAAATTTCCTAG
Upstream 100 bases:
>100_bases TGAGCATTACGAAAAATGGTGAGCCATGCCCAGGGAGAGCCATGCAAAATCAAACGAGATCCATTAAGGTATAAAAAATT CTTAAATTTTGCCTAAATCA
Downstream 100 bases:
>100_bases CTTCACTAGCCAAAAGCGCGATCGCCCACCGACCATCCTCCCTTGGGGGAGATGCCACAGGTAGAGAGGATTCTCTTAGT GTATGGAGTAAAATCAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MVAPSQITVTWHSEIAEIPKAAWDAIAAPLKTPFLEWDWLHNIELSGSVGPRTGWQPCHLSVQRDGEFIAMAPLYIKGHS YGEFVFDHQWADLSYRLGHEYYPKLVGMTPFTPAVGYRFLIAPGEDELTLSQVMVAAIDQFCDRQQLSGCNFLFVDPTWQ KTMEQLGFRAWLHHGYIWSNQNFDNFDDYLGAFTSNQRKNIKRERKAVDKAGLSLKMMTGDEIPAHYFPLIYRFYSSTCD KFFWGSKYLRKPFFETLESTYRHRVVLAAAYTPEDDKHPVGLSFCIRKDDYLYGRYWGAFDEYDCLHFEACYYKPIQWAI EQGITMYDPGAGGKHKRRRGFPATPNYSLHRFYQPRMGQVLDAYIDEINAMEQQEIEAINADIPFKRQEVQLKIS
Sequences:
>Translated_395_residues MVAPSQITVTWHSEIAEIPKAAWDAIAAPLKTPFLEWDWLHNIELSGSVGPRTGWQPCHLSVQRDGEFIAMAPLYIKGHS YGEFVFDHQWADLSYRLGHEYYPKLVGMTPFTPAVGYRFLIAPGEDELTLSQVMVAAIDQFCDRQQLSGCNFLFVDPTWQ KTMEQLGFRAWLHHGYIWSNQNFDNFDDYLGAFTSNQRKNIKRERKAVDKAGLSLKMMTGDEIPAHYFPLIYRFYSSTCD KFFWGSKYLRKPFFETLESTYRHRVVLAAAYTPEDDKHPVGLSFCIRKDDYLYGRYWGAFDEYDCLHFEACYYKPIQWAI EQGITMYDPGAGGKHKRRRGFPATPNYSLHRFYQPRMGQVLDAYIDEINAMEQQEIEAINADIPFKRQEVQLKIS >Mature_395_residues MVAPSQITVTWHSEIAEIPKAAWDAIAAPLKTPFLEWDWLHNIELSGSVGPRTGWQPCHLSVQRDGEFIAMAPLYIKGHS YGEFVFDHQWADLSYRLGHEYYPKLVGMTPFTPAVGYRFLIAPGEDELTLSQVMVAAIDQFCDRQQLSGCNFLFVDPTWQ KTMEQLGFRAWLHHGYIWSNQNFDNFDDYLGAFTSNQRKNIKRERKAVDKAGLSLKMMTGDEIPAHYFPLIYRFYSSTCD KFFWGSKYLRKPFFETLESTYRHRVVLAAAYTPEDDKHPVGLSFCIRKDDYLYGRYWGAFDEYDCLHFEACYYKPIQWAI EQGITMYDPGAGGKHKRRRGFPATPNYSLHRFYQPRMGQVLDAYIDEINAMEQQEIEAINADIPFKRQEVQLKIS
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45961; Mature: 45961
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPSQITVTWHSEIAEIPKAAWDAIAAPLKTPFLEWDWLHNIELSGSVGPRTGWQPCHL CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCEEE SVQRDGEFIAMAPLYIKGHSYGEFVFDHQWADLSYRLGHEYYPKLVGMTPFTPAVGYRFL EEECCCCEEEEEEEEEECCCCCCEEEECCCCCCHHHCCCHHHHHHCCCCCCCCCCCCEEE IAPGEDELTLSQVMVAAIDQFCDRQQLSGCNFLFVDPTWQKTMEQLGFRAWLHHGYIWSN EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCEEECC QNFDNFDDYLGAFTSNQRKNIKRERKAVDKAGLSLKMMTGDEIPAHYFPLIYRFYSSTCD CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KFFWGSKYLRKPFFETLESTYRHRVVLAAAYTPEDDKHPVGLSFCIRKDDYLYGRYWGAF HHHCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCC DEYDCLHFEACYYKPIQWAIEQGITMYDPGAGGKHKRRRGFPATPNYSLHRFYQPRMGQV CCCCCEEEHHHHCCHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCCHHHHCCCHHHHH LDAYIDEINAMEQQEIEAINADIPFKRQEVQLKIS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC >Mature Secondary Structure MVAPSQITVTWHSEIAEIPKAAWDAIAAPLKTPFLEWDWLHNIELSGSVGPRTGWQPCHL CCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCEECEEECCCCCCCCCCCCEEE SVQRDGEFIAMAPLYIKGHSYGEFVFDHQWADLSYRLGHEYYPKLVGMTPFTPAVGYRFL EEECCCCEEEEEEEEEECCCCCCEEEECCCCCCHHHCCCHHHHHHCCCCCCCCCCCCEEE IAPGEDELTLSQVMVAAIDQFCDRQQLSGCNFLFVDPTWQKTMEQLGFRAWLHHGYIWSN EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCEEECC QNFDNFDDYLGAFTSNQRKNIKRERKAVDKAGLSLKMMTGDEIPAHYFPLIYRFYSSTCD CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHH KFFWGSKYLRKPFFETLESTYRHRVVLAAAYTPEDDKHPVGLSFCIRKDDYLYGRYWGAF HHHCCCHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEECCC DEYDCLHFEACYYKPIQWAIEQGITMYDPGAGGKHKRRRGFPATPNYSLHRFYQPRMGQV CCCCCEEEHHHHCCHHHHHHHCCCEEECCCCCCCCHHCCCCCCCCCCCHHHHCCCHHHHH LDAYIDEINAMEQQEIEAINADIPFKRQEVQLKIS HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA