| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076961
Identifier: 170076961
GI number: 170076961
Start: 347663
End: 348355
Strand: Direct
Name: 170076961
Synonym: SYNPCC7002_A0333
Alternate gene names: NA
Gene position: 347663-348355 (Clockwise)
Preceding gene: 170076960
Following gene: 170076962
Centisome position: 11.56
GC content: 38.24
Gene sequence:
>693_bases ATGAAACAAGAAGTAGGTGCATTATTACATCTCTATCTCGATGAAATCAGTACAGGGATAGATACACAAGTCCATGATTT TTTGATTCAAGGAGCAGCCAAAGCCATTAATGATGCTGAAAATAGAAATTGGATTCCTTTAATTGTCAAACAAATCGGTT CTGAATCTTATCAAGTGATTGCGAATAGCTTCGTTTTTGCTGCTGCCGAAGAAGCAGGATTGACGAAAGTTTGGTGTATT GTTGCTGATGATTCCCCAGAAACTCAAGAATCGGCCCGCATTCTTACTCAAGAAAAGCTTGCTAAAATTAACCTCGCAAC AGCAACTAGGGAGGAAATCAAAGTGGGTCTGGACTATCTAATGAAGCGTCCAATTAATCCCCTGAAATTGGGCAGCGTTA AGCTCGCCAATGCAGTTGAACGTATTGAAAATGCTCCGCGTCAATATTGGAAAGAAAATTTAATGGATGTCACAAAAGTA AAATGCGGCATTACCAGAGGGAAAAAACTAAATATTTTCAAAGAAATTTTTTACACAACCCCTGAACCTCTGCCAGACGT AATTATTGATCCGCAGTTTCTTACGACTTTTACCCAGGCAGATCTCCAAAAAATGGCTAAAAAACGTGGCTTAAAAGGAT ATAGTAAGCTAAAAAAGAGTGCTCTAGTAAAATTACTTACTGAGCAAGGTTAA
Upstream 100 bases:
>100_bases CTCACATTGCATCCGCTGCATTTTCTAATCGTCCAGCAGTTTTTACAAGTAAAAAAGCACGGGAATATTATCGTGACTTA GTTCGGGAGTATTTTATTTA
Downstream 100 bases:
>100_bases TCCGAAGGAAAATTGCAAGATTCAAATTATTTCTAAATGATCATTAAAGAAAAAGATCCCATTGATGCAAACATAGAGCA GTTAAAACGATTATCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKQEVGALLHLYLDEISTGIDTQVHDFLIQGAAKAINDAENRNWIPLIVKQIGSESYQVIANSFVFAAAEEAGLTKVWCI VADDSPETQESARILTQEKLAKINLATATREEIKVGLDYLMKRPINPLKLGSVKLANAVERIENAPRQYWKENLMDVTKV KCGITRGKKLNIFKEIFYTTPEPLPDVIIDPQFLTTFTQADLQKMAKKRGLKGYSKLKKSALVKLLTEQG
Sequences:
>Translated_230_residues MKQEVGALLHLYLDEISTGIDTQVHDFLIQGAAKAINDAENRNWIPLIVKQIGSESYQVIANSFVFAAAEEAGLTKVWCI VADDSPETQESARILTQEKLAKINLATATREEIKVGLDYLMKRPINPLKLGSVKLANAVERIENAPRQYWKENLMDVTKV KCGITRGKKLNIFKEIFYTTPEPLPDVIIDPQFLTTFTQADLQKMAKKRGLKGYSKLKKSALVKLLTEQG >Mature_230_residues MKQEVGALLHLYLDEISTGIDTQVHDFLIQGAAKAINDAENRNWIPLIVKQIGSESYQVIANSFVFAAAEEAGLTKVWCI VADDSPETQESARILTQEKLAKINLATATREEIKVGLDYLMKRPINPLKLGSVKLANAVERIENAPRQYWKENLMDVTKV KCGITRGKKLNIFKEIFYTTPEPLPDVIIDPQFLTTFTQADLQKMAKKRGLKGYSKLKKSALVKLLTEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25775; Mature: 25775
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEVGALLHLYLDEISTGIDTQVHDFLIQGAAKAINDAENRNWIPLIVKQIGSESYQVI CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH ANSFVFAAAEEAGLTKVWCIVADDSPETQESARILTQEKLAKINLATATREEIKVGLDYL HHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKRPINPLKLGSVKLANAVERIENAPRQYWKENLMDVTKVKCGITRGKKLNIFKEIFYTT HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PEPLPDVIIDPQFLTTFTQADLQKMAKKRGLKGYSKLKKSALVKLLTEQG CCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQEVGALLHLYLDEISTGIDTQVHDFLIQGAAKAINDAENRNWIPLIVKQIGSESYQVI CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHH ANSFVFAAAEEAGLTKVWCIVADDSPETQESARILTQEKLAKINLATATREEIKVGLDYL HHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKRPINPLKLGSVKLANAVERIENAPRQYWKENLMDVTKVKCGITRGKKLNIFKEIFYTT HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PEPLPDVIIDPQFLTTFTQADLQKMAKKRGLKGYSKLKKSALVKLLTEQG CCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA