| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is argD [H]
Identifier: 170076954
GI number: 170076954
Start: 339698
End: 340954
Strand: Direct
Name: argD [H]
Synonym: SYNPCC7002_A0326
Alternate gene names: 170076954
Gene position: 339698-340954 (Clockwise)
Preceding gene: 170076950
Following gene: 170076958
Centisome position: 11.29
GC content: 54.1
Gene sequence:
>1257_bases GTGAGTCCCCAAACGCTACTGAACCATTCCCCAGCCCAAAGCTTTAACCCAACTCAGTTCGATCAGTATGTGATGCATAC CTATGGGCGCTTTCCGGTGGCGATCGCCAAGGGGGAAGGATGTCGTCTGTGGGATACCGAAGGGAAAAGTTACCTCGATT TTGTCGCAGGCATTGCCACCTGCACCCTGGGCCATGCTCACCCAGCCCTGATCCAAGCGGTCAGTGCGCAGATTCAAAAA CTGCACCATATTTCTAACCTCTACTACATCCCAGAGCAAGGCGCTTTAGCCCAGTGGATCGTCGAACATTCCTGTGCCGA TAAAGTCTTTTTCTGTAACTCCGGGGCCGAAGCCAACGAAGCGGCGATTAAATTAGTCCGTAAATATGCCCACACCGTCT CAGATTTCCTCGAACAACCCGTGATCCTTTCGGCGAAATCGAGCTTCCACGGGCGTACCCTTGCGACGATTACCGCCACC GGACAACCCAAATACCAAAAACATTTCGACCCGCTCCCCGATGGGTTTGCCTATGTGCCCTACAACGACATTCGCGCCCT CGAAGAAGCGATCACCGACATCGATGAAGGTAACCGCCGCGTCGCTGCCATTATGCTCGAAGCCCTCCAGGGAGAAGGGG GCGTCCGGCCTGGTGATGTGGAATATTTCAAAGCAGTGCGGCGCATTTGTGACGAAAACGGAATTCTCCTTGTCCTCGAT GAAGTGCAAGTTGGGGTCGGGAGAACTGGCAAATACTGGGGCTACGAAAACCTCGGCATTGAACCGGATATTTTCACCAG TGCGAAGGGATTAGCGGGAGGAATCCCCATTGGCGCGATGATGTGCAAGGATTCCTGTGCGGTCTTTAACCCTGGGGAAC ACGCCAGCACCTTCGGCGGTAACCCATTCTCCTGTGCGGCGGCCCTAGCGGTGGTTGAAACCCTCGAACAGGAAAACCTA CTCGAAAATGTCAATGCCCGTGGGGAGCAGCTCCGGGCGGGTTTAAAAACCCTGGCCGAAAAATATCCCTACTTCAGCGA TGTCCGGGGCTGGGGTTTGATCAATGGTATGGAAATTAAAGCAGACCTCGAACTCACCTCCATTGAAGTGGTCAAAGCAG CTATGGAAAAGGGTCTACTGTTGGCTCCCGCTGGCCCGAAGGTACTCCGATTTGTGCCGCCTCTGATTGTTTCCGCCGCA GAAATCAATGAGGCGATCGCCCTTTTAGACCAGACCCTCGCTGCCATGGCTCTCTAA
Upstream 100 bases:
>100_bases ATTTCTTTAGCTCATTCCCCCCTTGTATTTAGCAAAAAAGATTACCCATTGGCTAAACTGAAATTTAACTTTGAGTCTCG CCATCGAAGAGGAGTAACCC
Downstream 100 bases:
>100_bases ATTTCTTTATCCTGCCCAAAGCAATAAAAAGCTCCCCAACTATTGAAAATCGGGGAGTTTTATTTTTACATGCTTGGCCC AGTGGGAATTACACCGTAAC
Product: acetylornithine aminotransferase
Products: NA
Alternate protein names: ACOAT [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQK LHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITAT GQPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENL LENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAA EINEAIALLDQTLAAMAL
Sequences:
>Translated_418_residues MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQK LHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITAT GQPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENL LENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAA EINEAIALLDQTLAAMAL >Mature_417_residues SPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQKL HHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATG QPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLDE VQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENLL ENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAE INEAIALLDQTLAAMAL
Specific function: Involved In Both The Arginine And Lysine Biosynthetic Pathways. [C]
COG id: COG4992
COG function: function code E; Ornithine/acetylornithine aminotransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=398, Percent_Identity=36.6834170854271, Blast_Score=271, Evalue=7e-73, Organism=Homo sapiens, GI284507298, Length=304, Percent_Identity=38.1578947368421, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI24119277, Length=421, Percent_Identity=30.166270783848, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI37574042, Length=421, Percent_Identity=27.790973871734, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI13994255, Length=437, Percent_Identity=26.5446224256293, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI226442709, Length=390, Percent_Identity=27.9487179487179, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI226442705, Length=421, Percent_Identity=26.8408551068884, Blast_Score=138, Evalue=7e-33, Organism=Homo sapiens, GI188536080, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI38679950, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI38679946, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1789759, Length=396, Percent_Identity=39.6464646464646, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1788044, Length=396, Percent_Identity=40.1515151515151, Blast_Score=309, Evalue=2e-85, Organism=Escherichia coli, GI1789016, Length=410, Percent_Identity=35.609756097561, Blast_Score=238, Evalue=4e-64, Organism=Escherichia coli, GI145693181, Length=383, Percent_Identity=35.509138381201, Blast_Score=227, Evalue=1e-60, Organism=Escherichia coli, GI1787560, Length=402, Percent_Identity=34.8258706467662, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1786991, Length=425, Percent_Identity=27.2941176470588, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1786349, Length=325, Percent_Identity=28.6153846153846, Blast_Score=114, Evalue=1e-26, Organism=Caenorhabditis elegans, GI25144271, Length=399, Percent_Identity=36.8421052631579, Blast_Score=269, Evalue=2e-72, Organism=Caenorhabditis elegans, GI25144274, Length=282, Percent_Identity=36.5248226950355, Blast_Score=185, Evalue=4e-47, Organism=Caenorhabditis elegans, GI32564660, Length=436, Percent_Identity=29.3577981651376, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI71992977, Length=434, Percent_Identity=29.0322580645161, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI71981843, Length=165, Percent_Identity=36.969696969697, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17541228, Length=453, Percent_Identity=26.7108167770419, Blast_Score=121, Evalue=8e-28, Organism=Saccharomyces cerevisiae, GI6324432, Length=407, Percent_Identity=35.6265356265356, Blast_Score=250, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6323470, Length=400, Percent_Identity=33.5, Blast_Score=214, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321456, Length=376, Percent_Identity=26.5957446808511, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324386, Length=449, Percent_Identity=23.162583518931, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI21357415, Length=399, Percent_Identity=36.3408521303258, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI28574759, Length=424, Percent_Identity=30.6603773584906, Blast_Score=184, Evalue=7e-47, Organism=Drosophila melanogaster, GI161085790, Length=428, Percent_Identity=30.3738317757009, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI21356575, Length=426, Percent_Identity=28.8732394366197, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI281366494, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24667139, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24667143, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004636 - InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =2.6.1.11 [H]
Molecular weight: Translated: 45311; Mature: 45180
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIAT CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH CTLGHAHPALIQAVSAQIQKLHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANE HHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHH AAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATGQPKYQKHFDPLPDGFAYVP HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCEEECC YNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGG CEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCC NPFSCAAALAVVETLEQENLLENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIK CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEE ADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAEINEAIALLDQTLAAMAL ECCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIAT CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH CTLGHAHPALIQAVSAQIQKLHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANE HHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHH AAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATGQPKYQKHFDPLPDGFAYVP HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCEEECC YNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGG CEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCC NPFSCAAALAVVETLEQENLLENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIK CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEE ADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAEINEAIALLDQTLAAMAL ECCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]