Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is argD [H]

Identifier: 170076954

GI number: 170076954

Start: 339698

End: 340954

Strand: Direct

Name: argD [H]

Synonym: SYNPCC7002_A0326

Alternate gene names: 170076954

Gene position: 339698-340954 (Clockwise)

Preceding gene: 170076950

Following gene: 170076958

Centisome position: 11.29

GC content: 54.1

Gene sequence:

>1257_bases
GTGAGTCCCCAAACGCTACTGAACCATTCCCCAGCCCAAAGCTTTAACCCAACTCAGTTCGATCAGTATGTGATGCATAC
CTATGGGCGCTTTCCGGTGGCGATCGCCAAGGGGGAAGGATGTCGTCTGTGGGATACCGAAGGGAAAAGTTACCTCGATT
TTGTCGCAGGCATTGCCACCTGCACCCTGGGCCATGCTCACCCAGCCCTGATCCAAGCGGTCAGTGCGCAGATTCAAAAA
CTGCACCATATTTCTAACCTCTACTACATCCCAGAGCAAGGCGCTTTAGCCCAGTGGATCGTCGAACATTCCTGTGCCGA
TAAAGTCTTTTTCTGTAACTCCGGGGCCGAAGCCAACGAAGCGGCGATTAAATTAGTCCGTAAATATGCCCACACCGTCT
CAGATTTCCTCGAACAACCCGTGATCCTTTCGGCGAAATCGAGCTTCCACGGGCGTACCCTTGCGACGATTACCGCCACC
GGACAACCCAAATACCAAAAACATTTCGACCCGCTCCCCGATGGGTTTGCCTATGTGCCCTACAACGACATTCGCGCCCT
CGAAGAAGCGATCACCGACATCGATGAAGGTAACCGCCGCGTCGCTGCCATTATGCTCGAAGCCCTCCAGGGAGAAGGGG
GCGTCCGGCCTGGTGATGTGGAATATTTCAAAGCAGTGCGGCGCATTTGTGACGAAAACGGAATTCTCCTTGTCCTCGAT
GAAGTGCAAGTTGGGGTCGGGAGAACTGGCAAATACTGGGGCTACGAAAACCTCGGCATTGAACCGGATATTTTCACCAG
TGCGAAGGGATTAGCGGGAGGAATCCCCATTGGCGCGATGATGTGCAAGGATTCCTGTGCGGTCTTTAACCCTGGGGAAC
ACGCCAGCACCTTCGGCGGTAACCCATTCTCCTGTGCGGCGGCCCTAGCGGTGGTTGAAACCCTCGAACAGGAAAACCTA
CTCGAAAATGTCAATGCCCGTGGGGAGCAGCTCCGGGCGGGTTTAAAAACCCTGGCCGAAAAATATCCCTACTTCAGCGA
TGTCCGGGGCTGGGGTTTGATCAATGGTATGGAAATTAAAGCAGACCTCGAACTCACCTCCATTGAAGTGGTCAAAGCAG
CTATGGAAAAGGGTCTACTGTTGGCTCCCGCTGGCCCGAAGGTACTCCGATTTGTGCCGCCTCTGATTGTTTCCGCCGCA
GAAATCAATGAGGCGATCGCCCTTTTAGACCAGACCCTCGCTGCCATGGCTCTCTAA

Upstream 100 bases:

>100_bases
ATTTCTTTAGCTCATTCCCCCCTTGTATTTAGCAAAAAAGATTACCCATTGGCTAAACTGAAATTTAACTTTGAGTCTCG
CCATCGAAGAGGAGTAACCC

Downstream 100 bases:

>100_bases
ATTTCTTTATCCTGCCCAAAGCAATAAAAAGCTCCCCAACTATTGAAAATCGGGGAGTTTTATTTTTACATGCTTGGCCC
AGTGGGAATTACACCGTAAC

Product: acetylornithine aminotransferase

Products: NA

Alternate protein names: ACOAT [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQK
LHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITAT
GQPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD
EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENL
LENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAA
EINEAIALLDQTLAAMAL

Sequences:

>Translated_418_residues
MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQK
LHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITAT
GQPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD
EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENL
LENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAA
EINEAIALLDQTLAAMAL
>Mature_417_residues
SPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIATCTLGHAHPALIQAVSAQIQKL
HHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANEAAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATG
QPKYQKHFDPLPDGFAYVPYNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLDE
VQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGGNPFSCAAALAVVETLEQENLL
ENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIKADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAE
INEAIALLDQTLAAMAL

Specific function: Involved In Both The Arginine And Lysine Biosynthetic Pathways. [C]

COG id: COG4992

COG function: function code E; Ornithine/acetylornithine aminotransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily [H]

Homologues:

Organism=Homo sapiens, GI4557809, Length=398, Percent_Identity=36.6834170854271, Blast_Score=271, Evalue=7e-73,
Organism=Homo sapiens, GI284507298, Length=304, Percent_Identity=38.1578947368421, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI24119277, Length=421, Percent_Identity=30.166270783848, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI37574042, Length=421, Percent_Identity=27.790973871734, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI13994255, Length=437, Percent_Identity=26.5446224256293, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI226442709, Length=390, Percent_Identity=27.9487179487179, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI226442705, Length=421, Percent_Identity=26.8408551068884, Blast_Score=138, Evalue=7e-33,
Organism=Homo sapiens, GI188536080, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI38679950, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI38679946, Length=429, Percent_Identity=26.3403263403263, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1789759, Length=396, Percent_Identity=39.6464646464646, Blast_Score=310, Evalue=2e-85,
Organism=Escherichia coli, GI1788044, Length=396, Percent_Identity=40.1515151515151, Blast_Score=309, Evalue=2e-85,
Organism=Escherichia coli, GI1789016, Length=410, Percent_Identity=35.609756097561, Blast_Score=238, Evalue=4e-64,
Organism=Escherichia coli, GI145693181, Length=383, Percent_Identity=35.509138381201, Blast_Score=227, Evalue=1e-60,
Organism=Escherichia coli, GI1787560, Length=402, Percent_Identity=34.8258706467662, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1786991, Length=425, Percent_Identity=27.2941176470588, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1786349, Length=325, Percent_Identity=28.6153846153846, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI25144271, Length=399, Percent_Identity=36.8421052631579, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI25144274, Length=282, Percent_Identity=36.5248226950355, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI32564660, Length=436, Percent_Identity=29.3577981651376, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71992977, Length=434, Percent_Identity=29.0322580645161, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI71981843, Length=165, Percent_Identity=36.969696969697, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17541228, Length=453, Percent_Identity=26.7108167770419, Blast_Score=121, Evalue=8e-28,
Organism=Saccharomyces cerevisiae, GI6324432, Length=407, Percent_Identity=35.6265356265356, Blast_Score=250, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6323470, Length=400, Percent_Identity=33.5, Blast_Score=214, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6321456, Length=376, Percent_Identity=26.5957446808511, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6324386, Length=449, Percent_Identity=23.162583518931, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21357415, Length=399, Percent_Identity=36.3408521303258, Blast_Score=266, Evalue=2e-71,
Organism=Drosophila melanogaster, GI28574759, Length=424, Percent_Identity=30.6603773584906, Blast_Score=184, Evalue=7e-47,
Organism=Drosophila melanogaster, GI161085790, Length=428, Percent_Identity=30.3738317757009, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21356575, Length=426, Percent_Identity=28.8732394366197, Blast_Score=142, Evalue=4e-34,
Organism=Drosophila melanogaster, GI281366494, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24667139, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI24667143, Length=431, Percent_Identity=25.9860788863109, Blast_Score=122, Evalue=4e-28,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004636
- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =2.6.1.11 [H]

Molecular weight: Translated: 45311; Mature: 45180

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIAT
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH
CTLGHAHPALIQAVSAQIQKLHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANE
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHH
AAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATGQPKYQKHFDPLPDGFAYVP
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCEEECC
YNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGG
CEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCC
NPFSCAAALAVVETLEQENLLENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEE
ADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAEINEAIALLDQTLAAMAL
ECCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SPQTLLNHSPAQSFNPTQFDQYVMHTYGRFPVAIAKGEGCRLWDTEGKSYLDFVAGIAT
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHH
CTLGHAHPALIQAVSAQIQKLHHISNLYYIPEQGALAQWIVEHSCADKVFFCNSGAEANE
HHCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHH
AAIKLVRKYAHTVSDFLEQPVILSAKSSFHGRTLATITATGQPKYQKHFDPLPDGFAYVP
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCEEECC
YNDIRALEEAITDIDEGNRRVAAIMLEALQGEGGVRPGDVEYFKAVRRICDENGILLVLD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEE
EVQVGVGRTGKYWGYENLGIEPDIFTSAKGLAGGIPIGAMMCKDSCAVFNPGEHASTFGG
CEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCC
NPFSCAAALAVVETLEQENLLENVNARGEQLRAGLKTLAEKYPYFSDVRGWGLINGMEIK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEEE
ADLELTSIEVVKAAMEKGLLLAPAGPKVLRFVPPLIVSAAEINEAIALLDQTLAAMAL
ECCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]