| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is glnN [H]
Identifier: 170076875
GI number: 170076875
Start: 258454
End: 260628
Strand: Direct
Name: glnN [H]
Synonym: SYNPCC7002_A0246
Alternate gene names: 170076875
Gene position: 258454-260628 (Clockwise)
Preceding gene: 170076874
Following gene: 170076878
Centisome position: 8.59
GC content: 50.71
Gene sequence:
>2175_bases ATGACTGGAAACGCCGCCCGTGTTCAAGCGATTCAGCAAATTACCAATCGTACCCCCATCAAGTGTGAACCGCCCATTAA GCTCGAAGAAGCTTGGGCTACTAATGTTTTTGATCTGAGTAAGATGCAGGCCAGTCTCCCAAAGGCCGTCTTTAAATCTA TCAAAAACACCATTACTTCCGGTGAAAAGCTAGACCCTTCCGTGGCCGATGCTGTGGCAACAGCAATGCGTGATTGGGCC ATGTCTAAGGGCGCTCTCTACTACGCCCACGTCTTCTACCCGATGACCAACCTCACCGCAGAGAAACACGATGGTTTCGT CTCTGTCCAGAGCGATGGAAAAGTCATCTCCGAATTTTCCGGTAAGGTACTGGTACAAGGGGAGCCCGATGGTTCTTCTT TCCCCAACGGTGGGATCCGTGACACCTTTGAAGCACGGGGTTATACGGCTTGGGACGTGACCAGTCCGGCCTACATCATG GAAACCGAAAATGGTTCGACCCTTTGTATTCCTACCGTTTTCGTCTCCTGGACTGGGGAAGCACTCGATAAAAAAGTGCC CCTACTGCGCTCCATCGATGCCATGAATAAGGCAGCCCAGAAAGTTTTAAAATTGTTGGGTCACACCGAAATCGCCCGGG TCAATTCCAGTTGTGGGGCAGAACAGGAATATTTCCTCGTTGACTCTAACTTCGCCCACCAACGTCCGGATCTTCTCTTG GCTGGTCGTACCCTTTTTGGTAAGTCTCCGGCTAAGGGCCAAGAATTTGATGATCATTACTTTGGGGCCATCCCTGAGCG GGTACAAATCTTTATGCAGGATGTGGAAGCGCAACTGTATAAGCTCGGTATCCCCGCAAAAACCCGTCACAATGAAGTGG CACCGGGTCAATTTGAAATTGCGCCTGTGTTTGAAGCGGCAAACGTGGCCAGTGATCACCAACAGTTGATCATGACCACC CTCAAAACCACGGCGAAAAAGCACGGTTTTATGTGCTTGCTCCACGAAAAACCCTTTGCCGGGATCAATGGTTCTGGTAA GCACGTGAACTGGTCTGTGGGGAATGCAACCCAGGGTAATCTGCTGGATCCGGGCGATTCTCCCCATGACAACGCTCAGT TCCTCGTCTTCTGTGGGGCGGTAATCCGTGGTGTCCATAAGTTTGGACCTTTGATGCGGGCGGTAATTGCTAATGCCAGT AACGACCACCGCCTCGGTGCCAATGAAGCCCCCCCAGCCATTATGTCTGTGTACCTCGGTTCTCAGTTGGAGGAAGTTTT TGAGCAAATCAAAAACGGCACTGTTTCTGAGTCGAAGAAGAAAGGCGTTATGGATCTCGGTGTGGCGGTACTGCCTGAGC TGACTAAAGATGCGGGCGATCGCAACCGGACTTCCCCCTTTGCCTTTACCGGAAACCGTTTTGAGTTCCGGGCTGTGGGT TCTAGCCAGTCTGTGTCTGGGCCTTTGGTGGCGTTGAATACGATCCTCGCAGATTCCCTCGGTTGGATTGGCGATCGCCT CGAAAGTGAATTGGCGAAGGGATTAGAAATTAGCGAAGCCATTCTCACGGTTCTCAAAGAAATCATGAACGACCATGGTT CTGTGATCTTTGGTGGCAATGGCTACTCCGAAGAATGGCACCGTGAAGCCGTTCAAGAACGTGGTCTCCGGAATTTGCCC ACCACTGCTGATGCCCTACCTGTGCTCAAGGAAGATGAAGTAGTCGCCTTATTTGACCAGCTCAAGGTTCTGACTCCCAT CGAACTCGAAAGCCGCTTTGAAGTTTACGCTGAGCAGTACATCAAATCCATTGAAGTGGAAGCCAAACTGGTGATGAACA TGGCAAAAACCATGGTTTATCCCGCCGCTGTGGAATACCTGTCCAAGTTGTCAGGCACGATCACTGCCCTCGTGAATCTC GGCATTTCCCTCGAGAAGAAAAGTGCAGAAACGGTTTCTAGTCTCACCAATGGCCTGATGGCTGCCACCGAAAAGCTCAG TGCTGCCTTTGAAAAAGAAGATTTTGCTTCTACAGAAGAGCATATGCACTATTGCGCGAGCACCATTCGCCCTCTGATGG ATGAGGTTCGTAGCTACGCAGATCTGTTGGAAAATGAACTACCAGACAGCTTCTGGCCCCTGCCCACTTACCAGGAAATG CTGTTTATTAAGTAG
Upstream 100 bases:
>100_bases GATGAAAAAAACAAAAGTGAATTCGATTTCTGTATAGATCTTATCTGTTTTTAGGATTAGTCTTGGGTAGTATGGTGCGG TTAGATCTACGGAAAAACCT
Downstream 100 bases:
>100_bases ATGATTCGCCTCGATTGAGTCAATCATTAAATAAAATTCAAAATCCCTCTATGTCCTCTAGCGATGTAGGGGGCTTTTAT TGTGTGAAAAAACGAGTTCA
Product: glutamine synthetase type III
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MTGNAARVQAIQQITNRTPIKCEPPIKLEEAWATNVFDLSKMQASLPKAVFKSIKNTITSGEKLDPSVADAVATAMRDWA MSKGALYYAHVFYPMTNLTAEKHDGFVSVQSDGKVISEFSGKVLVQGEPDGSSFPNGGIRDTFEARGYTAWDVTSPAYIM ETENGSTLCIPTVFVSWTGEALDKKVPLLRSIDAMNKAAQKVLKLLGHTEIARVNSSCGAEQEYFLVDSNFAHQRPDLLL AGRTLFGKSPAKGQEFDDHYFGAIPERVQIFMQDVEAQLYKLGIPAKTRHNEVAPGQFEIAPVFEAANVASDHQQLIMTT LKTTAKKHGFMCLLHEKPFAGINGSGKHVNWSVGNATQGNLLDPGDSPHDNAQFLVFCGAVIRGVHKFGPLMRAVIANAS NDHRLGANEAPPAIMSVYLGSQLEEVFEQIKNGTVSESKKKGVMDLGVAVLPELTKDAGDRNRTSPFAFTGNRFEFRAVG SSQSVSGPLVALNTILADSLGWIGDRLESELAKGLEISEAILTVLKEIMNDHGSVIFGGNGYSEEWHREAVQERGLRNLP TTADALPVLKEDEVVALFDQLKVLTPIELESRFEVYAEQYIKSIEVEAKLVMNMAKTMVYPAAVEYLSKLSGTITALVNL GISLEKKSAETVSSLTNGLMAATEKLSAAFEKEDFASTEEHMHYCASTIRPLMDEVRSYADLLENELPDSFWPLPTYQEM LFIK
Sequences:
>Translated_724_residues MTGNAARVQAIQQITNRTPIKCEPPIKLEEAWATNVFDLSKMQASLPKAVFKSIKNTITSGEKLDPSVADAVATAMRDWA MSKGALYYAHVFYPMTNLTAEKHDGFVSVQSDGKVISEFSGKVLVQGEPDGSSFPNGGIRDTFEARGYTAWDVTSPAYIM ETENGSTLCIPTVFVSWTGEALDKKVPLLRSIDAMNKAAQKVLKLLGHTEIARVNSSCGAEQEYFLVDSNFAHQRPDLLL AGRTLFGKSPAKGQEFDDHYFGAIPERVQIFMQDVEAQLYKLGIPAKTRHNEVAPGQFEIAPVFEAANVASDHQQLIMTT LKTTAKKHGFMCLLHEKPFAGINGSGKHVNWSVGNATQGNLLDPGDSPHDNAQFLVFCGAVIRGVHKFGPLMRAVIANAS NDHRLGANEAPPAIMSVYLGSQLEEVFEQIKNGTVSESKKKGVMDLGVAVLPELTKDAGDRNRTSPFAFTGNRFEFRAVG SSQSVSGPLVALNTILADSLGWIGDRLESELAKGLEISEAILTVLKEIMNDHGSVIFGGNGYSEEWHREAVQERGLRNLP TTADALPVLKEDEVVALFDQLKVLTPIELESRFEVYAEQYIKSIEVEAKLVMNMAKTMVYPAAVEYLSKLSGTITALVNL GISLEKKSAETVSSLTNGLMAATEKLSAAFEKEDFASTEEHMHYCASTIRPLMDEVRSYADLLENELPDSFWPLPTYQEM LFIK >Mature_723_residues TGNAARVQAIQQITNRTPIKCEPPIKLEEAWATNVFDLSKMQASLPKAVFKSIKNTITSGEKLDPSVADAVATAMRDWAM SKGALYYAHVFYPMTNLTAEKHDGFVSVQSDGKVISEFSGKVLVQGEPDGSSFPNGGIRDTFEARGYTAWDVTSPAYIME TENGSTLCIPTVFVSWTGEALDKKVPLLRSIDAMNKAAQKVLKLLGHTEIARVNSSCGAEQEYFLVDSNFAHQRPDLLLA GRTLFGKSPAKGQEFDDHYFGAIPERVQIFMQDVEAQLYKLGIPAKTRHNEVAPGQFEIAPVFEAANVASDHQQLIMTTL KTTAKKHGFMCLLHEKPFAGINGSGKHVNWSVGNATQGNLLDPGDSPHDNAQFLVFCGAVIRGVHKFGPLMRAVIANASN DHRLGANEAPPAIMSVYLGSQLEEVFEQIKNGTVSESKKKGVMDLGVAVLPELTKDAGDRNRTSPFAFTGNRFEFRAVGS SQSVSGPLVALNTILADSLGWIGDRLESELAKGLEISEAILTVLKEIMNDHGSVIFGGNGYSEEWHREAVQERGLRNLPT TADALPVLKEDEVVALFDQLKVLTPIELESRFEVYAEQYIKSIEVEAKLVMNMAKTMVYPAAVEYLSKLSGTITALVNLG ISLEKKSAETVSSLTNGLMAATEKLSAAFEKEDFASTEEHMHYCASTIRPLMDEVRSYADLLENELPDSFWPLPTYQEML FIK
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 79302; Mature: 79171
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00595 AA_TRANSFER_CLASS_5 ; PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNAARVQAIQQITNRTPIKCEPPIKLEEAWATNVFDLSKMQASLPKAVFKSIKNTITS CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC GEKLDPSVADAVATAMRDWAMSKGALYYAHVFYPMTNLTAEKHDGFVSVQSDGKVISEFS CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHCCCCEEEECCCCCCHHHCC GKVLVQGEPDGSSFPNGGIRDTFEARGYTAWDVTSPAYIMETENGSTLCIPTVFVSWTGE CEEEEEECCCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEECCCCCEEEEEEEEEECCCH ALDKKVPLLRSIDAMNKAAQKVLKLLGHTEIARVNSSCGAEQEYFLVDSNFAHQRPDLLL HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE AGRTLFGKSPAKGQEFDDHYFGAIPERVQIFMQDVEAQLYKLGIPAKTRHNEVAPGQFEI ECCHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE APVFEAANVASDHQQLIMTTLKTTAKKHGFMCLLHEKPFAGINGSGKHVNWSVGNATQGN EEHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCC LLDPGDSPHDNAQFLVFCGAVIRGVHKFGPLMRAVIANASNDHRLGANEAPPAIMSVYLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH SQLEEVFEQIKNGTVSESKKKGVMDLGVAVLPELTKDAGDRNRTSPFAFTGNRFEFRAVG HHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECC SSQSVSGPLVALNTILADSLGWIGDRLESELAKGLEISEAILTVLKEIMNDHGSVIFGGN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCC GYSEEWHREAVQERGLRNLPTTADALPVLKEDEVVALFDQLKVLTPIELESRFEVYAEQY CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH IKSIEVEAKLVMNMAKTMVYPAAVEYLSKLSGTITALVNLGISLEKKSAETVSSLTNGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AATEKLSAAFEKEDFASTEEHMHYCASTIRPLMDEVRSYADLLENELPDSFWPLPTYQEM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LFIK EECC >Mature Secondary Structure TGNAARVQAIQQITNRTPIKCEPPIKLEEAWATNVFDLSKMQASLPKAVFKSIKNTITS CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC GEKLDPSVADAVATAMRDWAMSKGALYYAHVFYPMTNLTAEKHDGFVSVQSDGKVISEFS CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCHHCCCCEEEECCCCCCHHHCC GKVLVQGEPDGSSFPNGGIRDTFEARGYTAWDVTSPAYIMETENGSTLCIPTVFVSWTGE CEEEEEECCCCCCCCCCCCCCCHHCCCEEEEECCCCEEEEECCCCCEEEEEEEEEECCCH ALDKKVPLLRSIDAMNKAAQKVLKLLGHTEIARVNSSCGAEQEYFLVDSNFAHQRPDLLL HHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEE AGRTLFGKSPAKGQEFDDHYFGAIPERVQIFMQDVEAQLYKLGIPAKTRHNEVAPGQFEI ECCHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE APVFEAANVASDHQQLIMTTLKTTAKKHGFMCLLHEKPFAGINGSGKHVNWSVGNATQGN EEHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCC LLDPGDSPHDNAQFLVFCGAVIRGVHKFGPLMRAVIANASNDHRLGANEAPPAIMSVYLG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH SQLEEVFEQIKNGTVSESKKKGVMDLGVAVLPELTKDAGDRNRTSPFAFTGNRFEFRAVG HHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECC SSQSVSGPLVALNTILADSLGWIGDRLESELAKGLEISEAILTVLKEIMNDHGSVIFGGN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCC GYSEEWHREAVQERGLRNLPTTADALPVLKEDEVVALFDQLKVLTPIELESRFEVYAEQY CCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH IKSIEVEAKLVMNMAKTMVYPAAVEYLSKLSGTITALVNLGISLEKKSAETVSSLTNGLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH AATEKLSAAFEKEDFASTEEHMHYCASTIRPLMDEVRSYADLLENELPDSFWPLPTYQEM HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LFIK EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]