Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170076866

Identifier: 170076866

GI number: 170076866

Start: 245026

End: 246246

Strand: Direct

Name: 170076866

Synonym: SYNPCC7002_A0236

Alternate gene names: NA

Gene position: 245026-246246 (Clockwise)

Preceding gene: 170076865

Following gene: 170076869

Centisome position: 8.15

GC content: 32.27

Gene sequence:

>1221_bases
ATGCAAGATCAGATCATAAACCTTCAGAAATTCGTTGCCAATAACTACGATTTAGAAAAATTAGAAGCCCAACTCAACGA
ATTCAATCCCCTTAAAGTTCTTAAAGTCGATCAATATGAAATTCGGCATTCAAATATTCTTGCATGGCTTTTGACACCAA
ATGAAAATCATAAATTAGGCTACGCTTTTTTAAAGAAAATCTTAGCTGAAATTATTGTTAATAATGAAAATATCGATACT
TCATTATCTGTTTTTGATATCGAAAAATTATTTTACACAGATTTTGAGATTCGACGTGAGTGGAAAAAAATCGACATCCT
GATCATCAGCAATGAAAATAAAATATGCGTCCTAATAGAAAATAAGGTTCATAGTGGCCATTCAAAAAGTCAACTGCAAA
AATATCTTGATATTGTAGAGAAAGAATATACAAATTATCGAATTATTCCTATTCTTCTAACAATAGATGGGGAAGAAGCA
TCCCATGAGAAATATGGAGTCTTATCCCACCACCAAATACTGACAACCCTCAAGTTTGTCGTCTCACTGCAGAAAGAAAA
TATCAGTGATAAAGTTTATGATTTTATCTATTACTACCTTAAAACTCTGGAACTGCTTACCATGGAAAATTTAGAAGTCA
AGAATTTATGCAAGCAAATTTACAAAGATCATAAAGAAGCCTTGGATTTAATTTATGAATACAAAGAAGACACCGAATTT
GAAGATTCTGCACGTGAATTCATTCAAAGCATTGATGTGGAAGAAATTTTTATCAACGGAAAAAGTGCTTGGTTTATTCC
CAAAAAACTGAATGATTCTTTGGGGAAGACTTTAAAAGGAGCAGGTGAAGAAAAATGGTGTAATAATTTACCCTTTGCTT
TTTGGTTTCCTGCACAAAAAGATAAAATTGGAATCATCATTGAAGTTAGACCTTTCGATCTTCCCTCTTTAAGAACAGCT
TTCCTCAAACATTTAAGGAATCATGGTTTCGACAAAAAAATTGATGGTTTCAATGAAATTTCTGATCGATCTTTAAGGCC
TGAAGCAAGATATACGCGGATTTTTTCTAAATATTCAAAATTTGAGGAGTGGGATAATAAAGAAAGTATCATTCAGAAAA
TGGATAATCTGTATCAAAGTAAAGTAGTGTGTCAAGCAGCAGAAAATATACTAGAAGCCTGTAAGACTTTTAATTGGTCT
CCAGAGCCTTATGAAGGGTGA

Upstream 100 bases:

>100_bases
GCGAGCGGACGGGGCATTACGGAATTTTTCCTTTGGAACGCACTACCGCTCTAACACTTACGCCCCAAGGAGCGGGGAAT
TCACCCTGAGAGATTAAAAA

Downstream 100 bases:

>100_bases
AAGTAATCGTAAATCTCCTGAGCGAGGTGTGACCCAATCCCTTTGACCTCAGCGATTTGTTCGGGTTTGGCTTCCCGGAG
ATAGTCGAGGGAGTGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQDQIINLQKFVANNYDLEKLEAQLNEFNPLKVLKVDQYEIRHSNILAWLLTPNENHKLGYAFLKKILAEIIVNNENIDT
SLSVFDIEKLFYTDFEIRREWKKIDILIISNENKICVLIENKVHSGHSKSQLQKYLDIVEKEYTNYRIIPILLTIDGEEA
SHEKYGVLSHHQILTTLKFVVSLQKENISDKVYDFIYYYLKTLELLTMENLEVKNLCKQIYKDHKEALDLIYEYKEDTEF
EDSAREFIQSIDVEEIFINGKSAWFIPKKLNDSLGKTLKGAGEEKWCNNLPFAFWFPAQKDKIGIIIEVRPFDLPSLRTA
FLKHLRNHGFDKKIDGFNEISDRSLRPEARYTRIFSKYSKFEEWDNKESIIQKMDNLYQSKVVCQAAENILEACKTFNWS
PEPYEG

Sequences:

>Translated_406_residues
MQDQIINLQKFVANNYDLEKLEAQLNEFNPLKVLKVDQYEIRHSNILAWLLTPNENHKLGYAFLKKILAEIIVNNENIDT
SLSVFDIEKLFYTDFEIRREWKKIDILIISNENKICVLIENKVHSGHSKSQLQKYLDIVEKEYTNYRIIPILLTIDGEEA
SHEKYGVLSHHQILTTLKFVVSLQKENISDKVYDFIYYYLKTLELLTMENLEVKNLCKQIYKDHKEALDLIYEYKEDTEF
EDSAREFIQSIDVEEIFINGKSAWFIPKKLNDSLGKTLKGAGEEKWCNNLPFAFWFPAQKDKIGIIIEVRPFDLPSLRTA
FLKHLRNHGFDKKIDGFNEISDRSLRPEARYTRIFSKYSKFEEWDNKESIIQKMDNLYQSKVVCQAAENILEACKTFNWS
PEPYEG
>Mature_406_residues
MQDQIINLQKFVANNYDLEKLEAQLNEFNPLKVLKVDQYEIRHSNILAWLLTPNENHKLGYAFLKKILAEIIVNNENIDT
SLSVFDIEKLFYTDFEIRREWKKIDILIISNENKICVLIENKVHSGHSKSQLQKYLDIVEKEYTNYRIIPILLTIDGEEA
SHEKYGVLSHHQILTTLKFVVSLQKENISDKVYDFIYYYLKTLELLTMENLEVKNLCKQIYKDHKEALDLIYEYKEDTEF
EDSAREFIQSIDVEEIFINGKSAWFIPKKLNDSLGKTLKGAGEEKWCNNLPFAFWFPAQKDKIGIIIEVRPFDLPSLRTA
FLKHLRNHGFDKKIDGFNEISDRSLRPEARYTRIFSKYSKFEEWDNKESIIQKMDNLYQSKVVCQAAENILEACKTFNWS
PEPYEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47941; Mature: 47941

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDQIINLQKFVANNYDLEKLEAQLNEFNPLKVLKVDQYEIRHSNILAWLLTPNENHKLG
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCEEECCCCEEEEEECCCCCCCHH
YAFLKKILAEIIVNNENIDTSLSVFDIEKLFYTDFEIRREWKKIDILIISNENKICVLIE
HHHHHHHHHHHHCCCCCCCCCEEHEEHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE
NKVHSGHSKSQLQKYLDIVEKEYTNYRIIPILLTIDGEEASHEKYGVLSHHQILTTLKFV
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
VSLQKENISDKVYDFIYYYLKTLELLTMENLEVKNLCKQIYKDHKEALDLIYEYKEDTEF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDSAREFIQSIDVEEIFINGKSAWFIPKKLNDSLGKTLKGAGEEKWCNNLPFAFWFPAQK
HHHHHHHHHHCCHHHEEECCCCEEECHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCC
DKIGIIIEVRPFDLPSLRTAFLKHLRNHGFDKKIDGFNEISDRSLRPEARYTRIFSKYSK
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
FEEWDNKESIIQKMDNLYQSKVVCQAAENILEACKTFNWSPEPYEG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQDQIINLQKFVANNYDLEKLEAQLNEFNPLKVLKVDQYEIRHSNILAWLLTPNENHKLG
CCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCEEECCCCEEEEEECCCCCCCHH
YAFLKKILAEIIVNNENIDTSLSVFDIEKLFYTDFEIRREWKKIDILIISNENKICVLIE
HHHHHHHHHHHHCCCCCCCCCEEHEEHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE
NKVHSGHSKSQLQKYLDIVEKEYTNYRIIPILLTIDGEEASHEKYGVLSHHQILTTLKFV
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
VSLQKENISDKVYDFIYYYLKTLELLTMENLEVKNLCKQIYKDHKEALDLIYEYKEDTEF
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH
EDSAREFIQSIDVEEIFINGKSAWFIPKKLNDSLGKTLKGAGEEKWCNNLPFAFWFPAQK
HHHHHHHHHHCCHHHEEECCCCEEECHHHHHHHHHHHHCCCCCHHHHCCCCEEEECCCCC
DKIGIIIEVRPFDLPSLRTAFLKHLRNHGFDKKIDGFNEISDRSLRPEARYTRIFSKYSK
CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHH
FEEWDNKESIIQKMDNLYQSKVVCQAAENILEACKTFNWSPEPYEG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA