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The map label for this gene is pmbA [C]

Identifier: 170076853

GI number: 170076853

Start: 233957

End: 235273

Strand: Direct

Name: pmbA [C]

Synonym: SYNPCC7002_A0222

Alternate gene names: 170076853

Gene position: 233957-235273 (Clockwise)

Preceding gene: 170076852

Following gene: 170076858

Centisome position: 7.78

GC content: 51.78

Gene sequence:

>1317_bases
ATGGTAGCGACGGCATCACAATTAATTTCCCAAGCTCAGGCCTTTGACTGGATTGAAAAAATTATTCGGGTGGCGGAATC
GGACGGGGTAATGGTGGCGATCGCCGAACGGGAATCTACCCTAGGCCGATTTGGGGAGAACCAAATTCGACAAAATTTGC
AGAAAAATCAGTTTGAAATAACAATTACAAGTTCTTTCGGCTCCCGTAGTGCCAGTGTTACCACCGTCGAACAAGACTGG
GAGCAGATCCAGGTGGCGTTACGACGGAGTGAAGATTTAGCGAGGCTTGCCCCAGAGGATCCTGAATGGGTACCGCTTTT
AGTAAAACAAGTGTACGCAGTGCGGACAGCAAAATTTGATGCCGCAACGTTGCAGCGATCGCCTTTACAGCGGGGAGAAT
TAATTCAGCAGGTGTGCCAGTGGAGCGAGGCAGCCGGAGTAAACGGGTCAGGAATTTTAAGTACCAGTGCTAAGGTTTAT
GCCCTGGGGAATTCGGTGGGCTTACGGGCAGGCGATCGCCAAACCCAGGCAGAATTTAGCTACACGGCCAAAATTGGCAA
TGGCTCCAGTTGGCAAAGTCGCACAGCCTGGGGGATTGATGAGTTGCCCATCGAGCAAATGGTACTGACCACCATGGAGC
GGGCAAAGCGATCACAAAATCCCCGTCGGGTTGAACCCGGTACTTACCCAGTGGTTCTGGGAGCCGGAGCAGTTGCTAAT
CTGATCCCCCGCTTAGTTTGGTATATGTCGGCACGGGCTGCCGCCGAGGGACGCAGTTATTTTGCCAAACATCCCCTCGG
TGAACAAATCTTTAGCCCATTGGTGAATCTATACCGTGATCCAACCCATCCCCTGTTACAAACCGGAGCTTTTGATAGTC
AGGGTTTGCCCTGTAATCCATTGGCGATCGCCACTGAAGGGATTCCGAGAACCCTGAGCTATGACCGTTACTGGGCGCAG
CAAACCGGCCAGAAACCCACAGGAAGCCTTTTCCCTCTGGTGATGACGGGCAGTGACCAGACTGTCGCTGATTTAATTGC
CCAGACAGAACGGGGAATTTTTATCAATCGTGCTTGGTATGTGCAGGCAGTGAATCCCCAAACCCTCGAATTTACAGGTA
TGACCCGCGACGGCACTTTTTGGATCGAAAACGGCAAACTCGCTTACCCGATCTGTAATCTACGTTTTAATCAATCTTTG
CCCGATTTACTCCGGGATGTGGAGGCGATCGCCACCCCAGAACGCCACGGCAGCACCGTGGTTCCGGCCCTTAAGGTGAA
AAGCTTTCACTTCAGTAGCGTTACCGACAGTATCTAG

Upstream 100 bases:

>100_bases
TGACCTAAATATTTTCCGCAAAACATTCTCCCTTCTATCGACTGCGGTGGAAGGGTTTTTGTTGTTTTAATAGAAAAAGT
TTCAATGGACAGCACTCGAC

Downstream 100 bases:

>100_bases
AAGCTTAAATACTTCAAAACTATTTTTAGATGGGCAGAGGGGGACTTGAACCCCCATGACCGAAGTCGCCACATTTTGAG
TGTGGTGCGTCTACCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: PmbA Protein; TldD/PmbA Family Protein; Zn-Dependent Protease; Peptidase PmbA; CalR5 Protein; TldD Protein; Zn-Dependent Protease-Like Protein; Protein PmbA; Modulator Of DNA Gyrase; TldD/PmbA Family; Zinc-Dependent Protease; Modulator Of DNA Gyrase Protein; Zinc-Dependent Protease TldD/PmbA Family; TldE-Like Protein; LOW QUALITY PROTEIN CalR5 Protein; PmbA/TldD Related Protein; U62 Family Peptidase; Modulator Of DNA Gyrase Protein TldD; PmbA-Related Protein; Zn-Dependent Protease PmbA-Like Protein; Zinc Protease PmbA; Microcin-Processing Peptidase PmbA; PmbA/TldD Family Protein; DNA Gyrase Modulator Family Protein

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MVATASQLISQAQAFDWIEKIIRVAESDGVMVAIAERESTLGRFGENQIRQNLQKNQFEITITSSFGSRSASVTTVEQDW
EQIQVALRRSEDLARLAPEDPEWVPLLVKQVYAVRTAKFDAATLQRSPLQRGELIQQVCQWSEAAGVNGSGILSTSAKVY
ALGNSVGLRAGDRQTQAEFSYTAKIGNGSSWQSRTAWGIDELPIEQMVLTTMERAKRSQNPRRVEPGTYPVVLGAGAVAN
LIPRLVWYMSARAAAEGRSYFAKHPLGEQIFSPLVNLYRDPTHPLLQTGAFDSQGLPCNPLAIATEGIPRTLSYDRYWAQ
QTGQKPTGSLFPLVMTGSDQTVADLIAQTERGIFINRAWYVQAVNPQTLEFTGMTRDGTFWIENGKLAYPICNLRFNQSL
PDLLRDVEAIATPERHGSTVVPALKVKSFHFSSVTDSI

Sequences:

>Translated_438_residues
MVATASQLISQAQAFDWIEKIIRVAESDGVMVAIAERESTLGRFGENQIRQNLQKNQFEITITSSFGSRSASVTTVEQDW
EQIQVALRRSEDLARLAPEDPEWVPLLVKQVYAVRTAKFDAATLQRSPLQRGELIQQVCQWSEAAGVNGSGILSTSAKVY
ALGNSVGLRAGDRQTQAEFSYTAKIGNGSSWQSRTAWGIDELPIEQMVLTTMERAKRSQNPRRVEPGTYPVVLGAGAVAN
LIPRLVWYMSARAAAEGRSYFAKHPLGEQIFSPLVNLYRDPTHPLLQTGAFDSQGLPCNPLAIATEGIPRTLSYDRYWAQ
QTGQKPTGSLFPLVMTGSDQTVADLIAQTERGIFINRAWYVQAVNPQTLEFTGMTRDGTFWIENGKLAYPICNLRFNQSL
PDLLRDVEAIATPERHGSTVVPALKVKSFHFSSVTDSI
>Mature_438_residues
MVATASQLISQAQAFDWIEKIIRVAESDGVMVAIAERESTLGRFGENQIRQNLQKNQFEITITSSFGSRSASVTTVEQDW
EQIQVALRRSEDLARLAPEDPEWVPLLVKQVYAVRTAKFDAATLQRSPLQRGELIQQVCQWSEAAGVNGSGILSTSAKVY
ALGNSVGLRAGDRQTQAEFSYTAKIGNGSSWQSRTAWGIDELPIEQMVLTTMERAKRSQNPRRVEPGTYPVVLGAGAVAN
LIPRLVWYMSARAAAEGRSYFAKHPLGEQIFSPLVNLYRDPTHPLLQTGAFDSQGLPCNPLAIATEGIPRTLSYDRYWAQ
QTGQKPTGSLFPLVMTGSDQTVADLIAQTERGIFINRAWYVQAVNPQTLEFTGMTRDGTFWIENGKLAYPICNLRFNQSL
PDLLRDVEAIATPERHGSTVVPALKVKSFHFSSVTDSI

Specific function: May Facilitate The Secretion Of The Peptide Antibiotic Microcin B17 (Mccb17) By Completing Its Maturation. Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48412; Mature: 48412

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATASQLISQAQAFDWIEKIIRVAESDGVMVAIAERESTLGRFGENQIRQNLQKNQFEI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCHHHHHHHHCCCEEEE
TITSSFGSRSASVTTVEQDWEQIQVALRRSEDLARLAPEDPEWVPLLVKQVYAVRTAKFD
EEEECCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
AATLQRSPLQRGELIQQVCQWSEAAGVNGSGILSTSAKVYALGNSVGLRAGDRQTQAEFS
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEE
YTAKIGNGSSWQSRTAWGIDELPIEQMVLTTMERAKRSQNPRRVEPGTYPVVLGAGAVAN
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH
LIPRLVWYMSARAAAEGRSYFAKHPLGEQIFSPLVNLYRDPTHPLLQTGAFDSQGLPCNP
HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
LAIATEGIPRTLSYDRYWAQQTGQKPTGSLFPLVMTGSDQTVADLIAQTERGIFINRAWY
CEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEE
VQAVNPQTLEFTGMTRDGTFWIENGKLAYPICNLRFNQSLPDLLRDVEAIATPERHGSTV
EEECCCCEEEEEECCCCCEEEEECCEEEEEEECCEECCCHHHHHHHHHHHCCCCCCCCEE
VPALKVKSFHFSSVTDSI
CCEEEEECEECCHHCCCC
>Mature Secondary Structure
MVATASQLISQAQAFDWIEKIIRVAESDGVMVAIAERESTLGRFGENQIRQNLQKNQFEI
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCHHHHHHHHCCCEEEE
TITSSFGSRSASVTTVEQDWEQIQVALRRSEDLARLAPEDPEWVPLLVKQVYAVRTAKFD
EEEECCCCCCCEEEEHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
AATLQRSPLQRGELIQQVCQWSEAAGVNGSGILSTSAKVYALGNSVGLRAGDRQTQAEFS
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCCCEE
YTAKIGNGSSWQSRTAWGIDELPIEQMVLTTMERAKRSQNPRRVEPGTYPVVLGAGAVAN
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHH
LIPRLVWYMSARAAAEGRSYFAKHPLGEQIFSPLVNLYRDPTHPLLQTGAFDSQGLPCNP
HHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCC
LAIATEGIPRTLSYDRYWAQQTGQKPTGSLFPLVMTGSDQTVADLIAQTERGIFINRAWY
CEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEEE
VQAVNPQTLEFTGMTRDGTFWIENGKLAYPICNLRFNQSLPDLLRDVEAIATPERHGSTV
EEECCCCEEEEEECCCCCEEEEECCEEEEEEECCEECCCHHHHHHHHHHHCCCCCCCCEE
VPALKVKSFHFSSVTDSI
CCEEEEECEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA