| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170076785
Identifier: 170076785
GI number: 170076785
Start: 159222
End: 159494
Strand: Direct
Name: 170076785
Synonym: SYNPCC7002_A0153
Alternate gene names: NA
Gene position: 159222-159494 (Clockwise)
Preceding gene: 170076784
Following gene: 170076786
Centisome position: 5.29
GC content: 49.82
Gene sequence:
>273_bases ATGTATAGTTTGGATTTGACCCTCAAATATAGCCCGATCCCCGTTTCTGTCCAACGTAAAGAAGCTGATGCGGCCCAAGC ACTCTATCAATCTGTCCTTGAGGCGATGAAAGGCGACTACGCCACCCTCCTCGAACTCACCTGCGAAAAGGATGAGGATA AAAAAATCGCCCTCCTCAGTGATCAAATTAGTGCCGTTGTCCTCAACAAGAAAAGTGGTGCAGCCGCTGGCGGACGGGTA CCAGGCTTTTTTGCCACCCAAGCAGCAGAATAA
Upstream 100 bases:
>100_bases GCCCAACTGCGACGGATCAAGGCGATCGCCGAAGCATCCCAACCGTGACCCCCCAAACCGTTTAAGATAAATAACTAGGA AAAATAACCCGTAAACCTGC
Downstream 100 bases:
>100_bases CAAAGGTCTCTGGCCTCAATCCACGGGGGGCGATCGCTGCCCTCTTTTTTGTTACGTTTACTGTGTCGTTGTGATTATGG CCCCCAGTGACCACTCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MYSLDLTLKYSPIPVSVQRKEADAAQALYQSVLEAMKGDYATLLELTCEKDEDKKIALLSDQISAVVLNKKSGAAAGGRV PGFFATQAAE
Sequences:
>Translated_90_residues MYSLDLTLKYSPIPVSVQRKEADAAQALYQSVLEAMKGDYATLLELTCEKDEDKKIALLSDQISAVVLNKKSGAAAGGRV PGFFATQAAE >Mature_90_residues MYSLDLTLKYSPIPVSVQRKEADAAQALYQSVLEAMKGDYATLLELTCEKDEDKKIALLSDQISAVVLNKKSGAAAGGRV PGFFATQAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0367 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y153_SYNP2 (B1XM20)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001733423.1 - GeneID: 6056922 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A0153 - HOGENOM: HBG284625 - OMA: VQIYEKS - ProtClustDB: PRK13683 - HAMAP: MF_01360 - InterPro: IPR020885
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9653; Mature: 9653
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSLDLTLKYSPIPVSVQRKEADAAQALYQSVLEAMKGDYATLLELTCEKDEDKKIALLS CCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC DQISAVVLNKKSGAAAGGRVPGFFATQAAE CCEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYSLDLTLKYSPIPVSVQRKEADAAQALYQSVLEAMKGDYATLLELTCEKDEDKKIALLS CCEEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEC DQISAVVLNKKSGAAAGGRVPGFFATQAAE CCEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA