| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076666
Identifier: 170076666
GI number: 170076666
Start: 27194
End: 28225
Strand: Direct
Name: 170076666
Synonym: SYNPCC7002_A0030
Alternate gene names: NA
Gene position: 27194-28225 (Clockwise)
Preceding gene: 170076664
Following gene: 170076667
Centisome position: 0.9
GC content: 52.52
Gene sequence:
>1032_bases ATGCCAAATGTTGTTCTGTGTGGCTATTACGGTCAGGGAAATGCCGGGGATGAAGCCCTGCTATTGACTCTGTTGCAGAT GTTGCCCCCTGGGGTGAAGCCCATTGTCCTCTCCCACAATCCCACCGCTACTGCCCAAGCCTATGGTGTGACTGCAATTC CCCACAAATCCTGGGCAACCCTCAAGGCGATCGCCAAAGCAGATGGTTTTATCTTTGGGGGCGGCAGTTTATTGCAGGAT GTCACGAGTTTAGGAAGCCTGCTATATTACGCCGGTTTGATGAAATGGGCGCAACTCCTAGGGAAAAAGACCATCGCCTG GGGCCAGGGCATCGGCCCGTTGCAGTCTAGTTTGGCGAATCAGGTTACGCGCTTTGTTCTCCGGGGTTGCACAGAAATCA CCGTGCGGGATCAGGCTTCAGCAGATTTATTAAAAAATTGGCAGATTCCCCACAGGCTCGCCCCAGATCCGGTGTGGGCT TTAGCAGCAAAATCTTTTCTGGAAATGCCAGGTTTACCCCGTCCCCGCATTGCGGTCAATCTCCGCTCCCACCGCACTTT AACACCCCAAAAAATTGCCGTTCTGGGGGAAGCCCTCAAACAATTTCAACGGCAGCATCAGGCCAGTGTGATTCTTGTGC CGTTTCAAAAAAGCCAAGACGAGGCGATCGCCAAGCAACTTTACGACGAATTAGCAGAACCCAAGGCGATTATTACCCCA TTGCAACCGCAACAGTACAAAAGCCTTTTTGCCCAAGTGGATTTTCTGATTGGGATGCGTCTCCATAGTCTGATCCTTGC CGCCGCCGCTTGTCCCTGCTTTGCCCTGAGCTACGATCCCAAGGTGGCCCAGCTACAGCAACAATGTCACCTCCCTGGCC TTGATCTGGATCAACTGCCCCGCGATGCAACTGCGATTACTGAACAGTGGACAGCCGCTTTGCAAACCGCCGAAAAGCTG ACCCCAGCCCAGCAGCAAACGATTCAATCCCAGGTACAGACCCATCAGGAAATACTGACAATCTTTCTTTAA
Upstream 100 bases:
>100_bases GTTTCTAGGGGGACATAGCCCGTCACTCAACTTTAGGCGGACAATTGGGCGCAATCAAACACGCCGATATAATAAAGCCT ATCTTTTCGTTAACGACACA
Downstream 100 bases:
>100_bases AAATGCGTTCGGTTTTGACGCCTAGGATGCGATCGCCGAAAAAATTGTTGATAATGGGCGTAAAAGTACTCTAACTGGAA AATCTTCACATAATGGGTAG
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Csab; Polysaccharide Pyruvyl Transferase Superfamily; CsaB Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPNVVLCGYYGQGNAGDEALLLTLLQMLPPGVKPIVLSHNPTATAQAYGVTAIPHKSWATLKAIAKADGFIFGGGSLLQD VTSLGSLLYYAGLMKWAQLLGKKTIAWGQGIGPLQSSLANQVTRFVLRGCTEITVRDQASADLLKNWQIPHRLAPDPVWA LAAKSFLEMPGLPRPRIAVNLRSHRTLTPQKIAVLGEALKQFQRQHQASVILVPFQKSQDEAIAKQLYDELAEPKAIITP LQPQQYKSLFAQVDFLIGMRLHSLILAAAACPCFALSYDPKVAQLQQQCHLPGLDLDQLPRDATAITEQWTAALQTAEKL TPAQQQTIQSQVQTHQEILTIFL
Sequences:
>Translated_343_residues MPNVVLCGYYGQGNAGDEALLLTLLQMLPPGVKPIVLSHNPTATAQAYGVTAIPHKSWATLKAIAKADGFIFGGGSLLQD VTSLGSLLYYAGLMKWAQLLGKKTIAWGQGIGPLQSSLANQVTRFVLRGCTEITVRDQASADLLKNWQIPHRLAPDPVWA LAAKSFLEMPGLPRPRIAVNLRSHRTLTPQKIAVLGEALKQFQRQHQASVILVPFQKSQDEAIAKQLYDELAEPKAIITP LQPQQYKSLFAQVDFLIGMRLHSLILAAAACPCFALSYDPKVAQLQQQCHLPGLDLDQLPRDATAITEQWTAALQTAEKL TPAQQQTIQSQVQTHQEILTIFL >Mature_342_residues PNVVLCGYYGQGNAGDEALLLTLLQMLPPGVKPIVLSHNPTATAQAYGVTAIPHKSWATLKAIAKADGFIFGGGSLLQDV TSLGSLLYYAGLMKWAQLLGKKTIAWGQGIGPLQSSLANQVTRFVLRGCTEITVRDQASADLLKNWQIPHRLAPDPVWAL AAKSFLEMPGLPRPRIAVNLRSHRTLTPQKIAVLGEALKQFQRQHQASVILVPFQKSQDEAIAKQLYDELAEPKAIITPL QPQQYKSLFAQVDFLIGMRLHSLILAAAACPCFALSYDPKVAQLQQQCHLPGLDLDQLPRDATAITEQWTAALQTAEKLT PAQQQTIQSQVQTHQEILTIFL
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37519; Mature: 37388
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNVVLCGYYGQGNAGDEALLLTLLQMLPPGVKPIVLSHNPTATAQAYGVTAIPHKSWAT CCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCEECCCCCHHH LKAIAKADGFIFGGGSLLQDVTSLGSLLYYAGLMKWAQLLGKKTIAWGQGIGPLQSSLAN HHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH QVTRFVLRGCTEITVRDQASADLLKNWQIPHRLAPDPVWALAAKSFLEMPGLPRPRIAVN HHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE LRSHRTLTPQKIAVLGEALKQFQRQHQASVILVPFQKSQDEAIAKQLYDELAEPKAIITP ECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECC LQPQQYKSLFAQVDFLIGMRLHSLILAAAACPCFALSYDPKVAQLQQQCHLPGLDLDQLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHCCCCCCHHHCC RDATAITEQWTAALQTAEKLTPAQQQTIQSQVQTHQEILTIFL CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNVVLCGYYGQGNAGDEALLLTLLQMLPPGVKPIVLSHNPTATAQAYGVTAIPHKSWAT CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCCCEECCCCCHHH LKAIAKADGFIFGGGSLLQDVTSLGSLLYYAGLMKWAQLLGKKTIAWGQGIGPLQSSLAN HHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHH QVTRFVLRGCTEITVRDQASADLLKNWQIPHRLAPDPVWALAAKSFLEMPGLPRPRIAVN HHHHHHHHCCCCEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEE LRSHRTLTPQKIAVLGEALKQFQRQHQASVILVPFQKSQDEAIAKQLYDELAEPKAIITP ECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEECC LQPQQYKSLFAQVDFLIGMRLHSLILAAAACPCFALSYDPKVAQLQQQCHLPGLDLDQLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHCCCCCCHHHCC RDATAITEQWTAALQTAEKLTPAQQQTIQSQVQTHQEILTIFL CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA