| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076663
Identifier: 170076663
GI number: 170076663
Start: 24806
End: 25246
Strand: Direct
Name: 170076663
Synonym: SYNPCC7002_A0027
Alternate gene names: NA
Gene position: 24806-25246 (Clockwise)
Preceding gene: 170076661
Following gene: 170076664
Centisome position: 0.82
GC content: 40.36
Gene sequence:
>441_bases ATGCTGAACCAAGATTTCAAAGAATTTATACAATTTCTCAACGCTAATCAGGTTCGTTATTTAGTTGTTGGGGGCTATGC TGTGGCCTTCTATGGCTATCCTCGCTACACAAAAGACATTGATATTTGGCTTGAAGCTTCCCAGGAAAATGGCGTGAAAG TCATGCAGGCACTACGGGATTTTGGTTTTGGTGACCTTGACTTACAAACAGAAGATTTTGCAACGGCTAATCAAGTGATT CAGTTAGGATATCCGCCGAGTCGTATTGATTTGCTGACTTCAGTAGATGGAATTCAATTTGCAGATTGCTATGATCTGCG GGTACCAGTTGAAATTGAGGGGACTGTCATTGATTTCATTGATTTGGAAAATTTACGGTTAAATAAACGTGCTTCGGGTC GATGGCAGGATTTAGCTGATTTGGAAAATTTACAGGATTGA
Upstream 100 bases:
>100_bases GAAAGAAAAAATGATCGGCAATTTTGGCTAACAAAATCTTATTTAGAACGATTAGCCGCCCTAGAAAATATCCGCAAAGA GTATCATCAATGGCAATACA
Downstream 100 bases:
>100_bases AGTGTCAAAGCGGGCCAACTTTTCGATCCGGTTTGAGGCATTTAGGTTTACCCTAAAGCCAAGTAATTGTCGGGACATGG GCAGAGTTTCATCATGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLNQDFKEFIQFLNANQVRYLVVGGYAVAFYGYPRYTKDIDIWLEASQENGVKVMQALRDFGFGDLDLQTEDFATANQVI QLGYPPSRIDLLTSVDGIQFADCYDLRVPVEIEGTVIDFIDLENLRLNKRASGRWQDLADLENLQD
Sequences:
>Translated_146_residues MLNQDFKEFIQFLNANQVRYLVVGGYAVAFYGYPRYTKDIDIWLEASQENGVKVMQALRDFGFGDLDLQTEDFATANQVI QLGYPPSRIDLLTSVDGIQFADCYDLRVPVEIEGTVIDFIDLENLRLNKRASGRWQDLADLENLQD >Mature_146_residues MLNQDFKEFIQFLNANQVRYLVVGGYAVAFYGYPRYTKDIDIWLEASQENGVKVMQALRDFGFGDLDLQTEDFATANQVI QLGYPPSRIDLLTSVDGIQFADCYDLRVPVEIEGTVIDFIDLENLRLNKRASGRWQDLADLENLQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16738; Mature: 16738
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNQDFKEFIQFLNANQVRYLVVGGYAVAFYGYPRYTKDIDIWLEASQENGVKVMQALRD CCCHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHH FGFGDLDLQTEDFATANQVIQLGYPPSRIDLLTSVDGIQFADCYDLRVPVEIEGTVIDFI CCCCCCCCCCCCHHCCCCEEECCCCCCCEEEEECCCCCEECCEECCEECEEECCEEEEEE DLENLRLNKRASGRWQDLADLENLQD ECCCCEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLNQDFKEFIQFLNANQVRYLVVGGYAVAFYGYPRYTKDIDIWLEASQENGVKVMQALRD CCCHHHHHHHHHHCCCCEEEEEECCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHH FGFGDLDLQTEDFATANQVIQLGYPPSRIDLLTSVDGIQFADCYDLRVPVEIEGTVIDFI CCCCCCCCCCCCHHCCCCEEECCCCCCCEEEEECCCCCEECCEECCEECEEECCEEEEEE DLENLRLNKRASGRWQDLADLENLQD ECCCCEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA