BacMap

Definition	Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession	NC_010475
Length	3,008,047

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The map label for this gene is hflB [C]

Identifier: 170076655

GI number: 170076655

Start: 12655

End: 14193

Strand: Direct

Name: hflB [C]

Synonym: SYNPCC7002_A0019

Alternate gene names: 170076655

Gene position: 12655-14193 (Clockwise)

Preceding gene: 170076654

Following gene: 170076656

Centisome position: 0.42

GC content: 52.96

Gene sequence:

>1539_bases
ATGGGCTTTTTGGATAACATTCACAGTTTAAAAACCTTCATCTGTGCGTTTCATCCAATCATTGTCATTGAGACCGTCGA
AGAGGAACGGGTAGAGGCGCTCCTGCGGGAAGTGGTCAAAGATTTACACATGCCCTTATTTGAATGGACGGTAAATTTGG
GACTGGCCCCAACCCCAGGGACAAAATATGCGCCCCGCACCAATGACTATGCCCGACCGGGGGCGAACAAGCCGATCGCC
TTTGAAAATACGGCAGATCCCCTTGATGTACTGAAATATATGGGCCAGATTGAACGCAATGGCATTTTTTGGCTCAAGGA
TTTTGCGCCCCACCTGGAGGATCCCAAAGTCATCCGGGAAGTACGGGAGTTGGCTGAGATTTATGGGGTTGTGAATTCGG
CGATGGTGCTGACAGGGGAGTCGATCACTTTACCAAAGGCGATCGCCCACGATGCGGTGTATTTTGAGCTGACCCTCCCG
GATGGGGACGAGCTGTACCAAACCCTGTCGGAGGTGATGCGGGAACTCAAGGTGCGCCATAAGCTAGCAATTACGCTCCA
GGGGGAAGAACTGAATCAATTTGTCCATGCCCTCAGTGGGATGACTCTCAAGCAGGCCCGCCAGGCGATCGCCTATGCCG
CGTTGATCGACGGGGAGTTAAACGGGGCTGATATCCTCAAGGTGATCCACCGCAAGGCCCAGATCCTCCGGGAAGAATCC
CTCCTCGAACTTTTTCCCGTCGAAGAAAATACCGCAAAACTAGGAGGCTTTGTGGGCCTCAAACAATGGTTAAAACGGTC
TCAAGTGGGCTTTAGCACGGCGGCAAAGCGGGTGAATCTTCCGGCCCCGAAGGGCATTTTAATCGTCGGAGTGCAGGGGT
GCGGGAAATCCCTCGCGGCGAAGACCATTGCTAGGGAATGGCAACTACCCTTGTTAAAACTGGATGCGGGCCGCCTGTAC
AACAAATTTGTCGGTGAATCGGAGAAAAATTTCCGCCAAGCAATTAAACTGGCTGAATCCATGGCCCCGGCGGTGTTGTG
GATCGATGAAATTGAAAAAAGCTTTGGTAATCCCAGCGGTGAGGGCGATGGGGGTCTGAGTTTACGTTTGTTTGGCTCGT
TCTTGACTTGGCTCCAGGAGAAATCCCAGGAAGTTTTTGTCGTTGCAACGGCCAATGATCTGTTGCAACTGCCGCCGGAA
CTGCTGCGGAAAGGGCGCTTCGATGAAATTTTCTTTGTGGATCTGCCCAATGCCCAAGAGCGGGCGGCGATCTTTTCGAT
TCACCTGGCGCGCCATCGACAAAATGTCCAAGATTTTGATTTGCGCATCTTGGTGACGGCGGCGGCAGGCTATAGTGGTG
CAGAGATTGAACAGGCAATAATTGCCGGGCTATACCAGGCTCTCTACGCCCAAACTCCCTTAACGACGGATGCGCTGGTG
GCTCAGATGAAAAGTACGGTGCCCCTGTCGGTGTCGCGGCGAGAGGATGTGGAAAAATTACGGGCGATCGCCTCGGAACG
TTTTGTGTCAGCGCGGTAA

Upstream 100 bases:

>100_bases
AAATGATCGAAAATCAACTTTACCACCTCCAAACAGTTGAGGAACTCCGTTTGCTTTACCGCAATTTACTCTGAGTCGGG
TCGGGAGTTTGGGGAGAACC

Downstream 100 bases:

>100_bases
AATACCGGGATGCGCATCTATGGCAATCGACAAATCAAAACTCTTCCTGGCGAATTAACGCGGCCTACCCTGGCAAAGGT
GCGGGAGGCAATTTTTAATA

Product: ABC transporter ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MGFLDNIHSLKTFICAFHPIIVIETVEEERVEALLREVVKDLHMPLFEWTVNLGLAPTPGTKYAPRTNDYARPGANKPIA
FENTADPLDVLKYMGQIERNGIFWLKDFAPHLEDPKVIREVRELAEIYGVVNSAMVLTGESITLPKAIAHDAVYFELTLP
DGDELYQTLSEVMRELKVRHKLAITLQGEELNQFVHALSGMTLKQARQAIAYAALIDGELNGADILKVIHRKAQILREES
LLELFPVEENTAKLGGFVGLKQWLKRSQVGFSTAAKRVNLPAPKGILIVGVQGCGKSLAAKTIAREWQLPLLKLDAGRLY
NKFVGESEKNFRQAIKLAESMAPAVLWIDEIEKSFGNPSGEGDGGLSLRLFGSFLTWLQEKSQEVFVVATANDLLQLPPE
LLRKGRFDEIFFVDLPNAQERAAIFSIHLARHRQNVQDFDLRILVTAAAGYSGAEIEQAIIAGLYQALYAQTPLTTDALV
AQMKSTVPLSVSRREDVEKLRAIASERFVSAR

Sequences:

>Translated_512_residues
MGFLDNIHSLKTFICAFHPIIVIETVEEERVEALLREVVKDLHMPLFEWTVNLGLAPTPGTKYAPRTNDYARPGANKPIA
FENTADPLDVLKYMGQIERNGIFWLKDFAPHLEDPKVIREVRELAEIYGVVNSAMVLTGESITLPKAIAHDAVYFELTLP
DGDELYQTLSEVMRELKVRHKLAITLQGEELNQFVHALSGMTLKQARQAIAYAALIDGELNGADILKVIHRKAQILREES
LLELFPVEENTAKLGGFVGLKQWLKRSQVGFSTAAKRVNLPAPKGILIVGVQGCGKSLAAKTIAREWQLPLLKLDAGRLY
NKFVGESEKNFRQAIKLAESMAPAVLWIDEIEKSFGNPSGEGDGGLSLRLFGSFLTWLQEKSQEVFVVATANDLLQLPPE
LLRKGRFDEIFFVDLPNAQERAAIFSIHLARHRQNVQDFDLRILVTAAAGYSGAEIEQAIIAGLYQALYAQTPLTTDALV
AQMKSTVPLSVSRREDVEKLRAIASERFVSAR
>Mature_511_residues
GFLDNIHSLKTFICAFHPIIVIETVEEERVEALLREVVKDLHMPLFEWTVNLGLAPTPGTKYAPRTNDYARPGANKPIAF
ENTADPLDVLKYMGQIERNGIFWLKDFAPHLEDPKVIREVRELAEIYGVVNSAMVLTGESITLPKAIAHDAVYFELTLPD
GDELYQTLSEVMRELKVRHKLAITLQGEELNQFVHALSGMTLKQARQAIAYAALIDGELNGADILKVIHRKAQILREESL
LELFPVEENTAKLGGFVGLKQWLKRSQVGFSTAAKRVNLPAPKGILIVGVQGCGKSLAAKTIAREWQLPLLKLDAGRLYN
KFVGESEKNFRQAIKLAESMAPAVLWIDEIEKSFGNPSGEGDGGLSLRLFGSFLTWLQEKSQEVFVVATANDLLQLPPEL
LRKGRFDEIFFVDLPNAQERAAIFSIHLARHRQNVQDFDLRILVTAAAGYSGAEIEQAIIAGLYQALYAQTPLTTDALVA
QMKSTVPLSVSRREDVEKLRAIASERFVSAR

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=184, Percent_Identity=34.2391304347826, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI45643125, Length=206, Percent_Identity=32.0388349514563, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI45643123, Length=206, Percent_Identity=32.0388349514563, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI6005942, Length=179, Percent_Identity=32.9608938547486, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI24430151, Length=218, Percent_Identity=27.9816513761468, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI195539395, Length=198, Percent_Identity=28.7878787878788, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI24497435, Length=189, Percent_Identity=30.1587301587302, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI300192933, Length=193, Percent_Identity=32.6424870466321, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI4505725, Length=223, Percent_Identity=28.6995515695067, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI21361144, Length=200, Percent_Identity=31.5, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI17865802, Length=189, Percent_Identity=30.6878306878307, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI4507173, Length=202, Percent_Identity=32.1782178217822, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI229577436, Length=262, Percent_Identity=27.4809160305344, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI24430155, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI5729991, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI89064750, Length=187, Percent_Identity=28.8770053475936, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI7019569, Length=189, Percent_Identity=29.1005291005291, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI194018488, Length=127, Percent_Identity=37.007874015748, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI153792536, Length=232, Percent_Identity=29.3103448275862, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI24497618, Length=213, Percent_Identity=28.169014084507, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4506209, Length=200, Percent_Identity=28, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI31742536, Length=179, Percent_Identity=30.7262569832402, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI112789543, Length=179, Percent_Identity=30.7262569832402, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI5901990, Length=182, Percent_Identity=30.2197802197802, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI21327685, Length=180, Percent_Identity=28.8888888888889, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI310125280, Length=227, Percent_Identity=29.0748898678414, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI7657689, Length=180, Percent_Identity=28.8888888888889, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI226371754, Length=185, Percent_Identity=30.8108108108108, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI310125282, Length=227, Percent_Identity=29.0748898678414, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI31377644, Length=184, Percent_Identity=29.3478260869565, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI156564401, Length=227, Percent_Identity=29.0748898678414, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI14149767, Length=182, Percent_Identity=29.6703296703297, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI62177112, Length=182, Percent_Identity=29.6703296703297, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI11875211, Length=184, Percent_Identity=29.8913043478261, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI40806170, Length=184, Percent_Identity=29.8913043478261, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1789568, Length=179, Percent_Identity=33.5195530726257, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17508053, Length=185, Percent_Identity=34.5945945945946, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17532375, Length=180, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17537217, Length=196, Percent_Identity=32.6530612244898, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17554786, Length=189, Percent_Identity=29.1005291005291, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17531535, Length=326, Percent_Identity=27.6073619631902, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987364, Length=210, Percent_Identity=29.5238095238095, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71987372, Length=210, Percent_Identity=29.5238095238095, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508701, Length=189, Percent_Identity=31.2169312169312, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17563250, Length=180, Percent_Identity=29.4444444444444, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25153574, Length=183, Percent_Identity=28.9617486338798, Blast_Score=85, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI193209502, Length=183, Percent_Identity=28.9617486338798, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25144278, Length=189, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144281, Length=189, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17554264, Length=182, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562804, Length=178, Percent_Identity=32.0224719101124, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71994521, Length=195, Percent_Identity=31.2820512820513, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25146157, Length=181, Percent_Identity=29.2817679558011, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17541226, Length=182, Percent_Identity=29.6703296703297, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17541224, Length=191, Percent_Identity=28.7958115183246, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI86561515, Length=189, Percent_Identity=26.984126984127, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193206114, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI133931034, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI193206116, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17505546, Length=159, Percent_Identity=30.188679245283, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17554784, Length=187, Percent_Identity=28.3422459893048, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17563248, Length=200, Percent_Identity=27.5, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115534323, Length=186, Percent_Identity=29.5698924731183, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17508421, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI32563584, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17560432, Length=179, Percent_Identity=29.0502793296089, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323429, Length=316, Percent_Identity=26.5822784810127, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6322994, Length=275, Percent_Identity=28, Blast_Score=97, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6320077, Length=183, Percent_Identity=32.2404371584699, Blast_Score=97, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321390, Length=189, Percent_Identity=30.1587301587302, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6322651, Length=192, Percent_Identity=28.6458333333333, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320197, Length=217, Percent_Identity=26.7281105990783, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6321465, Length=181, Percent_Identity=28.1767955801105, Blast_Score=86, Evalue=9e-18,
Organism=Saccharomyces cerevisiae, GI6324000, Length=178, Percent_Identity=32.5842696629214, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324833, Length=214, Percent_Identity=28.0373831775701, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325431, Length=193, Percent_Identity=30.0518134715026, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324691, Length=212, Percent_Identity=31.1320754716981, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320854, Length=205, Percent_Identity=30.7317073170732, Blast_Score=81, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=176, Percent_Identity=30.1136363636364, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323736, Length=193, Percent_Identity=32.6424870466321, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320887, Length=198, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6320602, Length=386, Percent_Identity=23.8341968911917, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322704, Length=150, Percent_Identity=31.3333333333333, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6325183, Length=186, Percent_Identity=25.2688172043011, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321709, Length=214, Percent_Identity=24.2990654205607, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281365776, Length=227, Percent_Identity=31.7180616740088, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24660075, Length=227, Percent_Identity=31.7180616740088, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI45552965, Length=227, Percent_Identity=31.7180616740088, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI19921202, Length=328, Percent_Identity=29.5731707317073, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI161076486, Length=197, Percent_Identity=31.9796954314721, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI161076488, Length=197, Percent_Identity=31.9796954314721, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI17137560, Length=197, Percent_Identity=31.9796954314721, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24652279, Length=197, Percent_Identity=31.9796954314721, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281363136, Length=191, Percent_Identity=33.5078534031414, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI78707192, Length=191, Percent_Identity=33.5078534031414, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24639391, Length=214, Percent_Identity=30.3738317757009, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19920408, Length=189, Percent_Identity=31.2169312169312, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24656825, Length=214, Percent_Identity=30.3738317757009, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24649446, Length=254, Percent_Identity=27.1653543307087, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24656820, Length=214, Percent_Identity=30.3738317757009, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24651451, Length=189, Percent_Identity=30.6878306878307, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28574878, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24665814, Length=190, Percent_Identity=31.0526315789474, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI21355121, Length=182, Percent_Identity=31.3186813186813, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24640100, Length=197, Percent_Identity=28.9340101522843, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI18860063, Length=214, Percent_Identity=27.5700934579439, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI17738151, Length=195, Percent_Identity=29.2307692307692, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24658770, Length=180, Percent_Identity=29.4444444444444, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI18859657, Length=177, Percent_Identity=31.0734463276836, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI281361487, Length=215, Percent_Identity=25.1162790697674, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24663015, Length=194, Percent_Identity=28.8659793814433, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24644145, Length=179, Percent_Identity=30.7262569832402, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI20129529, Length=181, Percent_Identity=31.4917127071823, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI20129423, Length=203, Percent_Identity=29.064039408867, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI17137738, Length=200, Percent_Identity=28.5, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581396, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571849, Length=240, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571847, Length=240, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17864540, Length=225, Percent_Identity=30.6666666666667, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281360142, Length=203, Percent_Identity=25.615763546798, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357333, Length=203, Percent_Identity=25.615763546798, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360146, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360138, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281360136, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24644411, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360144, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI281360140, Length=203, Percent_Identity=25.615763546798, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 57008; Mature: 56876

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLDNIHSLKTFICAFHPIIVIETVEEERVEALLREVVKDLHMPLFEWTVNLGLAPTPG
CCCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC
TKYAPRTNDYARPGANKPIAFENTADPLDVLKYMGQIERNGIFWLKDFAPHLEDPKVIRE
CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH
VRELAEIYGVVNSAMVLTGESITLPKAIAHDAVYFELTLPDGDELYQTLSEVMRELKVRH
HHHHHHHHHHHHCCEEEECCCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
KLAITLQGEELNQFVHALSGMTLKQARQAIAYAALIDGELNGADILKVIHRKAQILREES
EEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLELFPVEENTAKLGGFVGLKQWLKRSQVGFSTAAKRVNLPAPKGILIVGVQGCGKSLAA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
KTIAREWQLPLLKLDAGRLYNKFVGESEKNFRQAIKLAESMAPAVLWIDEIEKSFGNPSG
HHHHHHHCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
EGDGGLSLRLFGSFLTWLQEKSQEVFVVATANDLLQLPPELLRKGRFDEIFFVDLPNAQE
CCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHCCCCCEEEEEECCCCHH
RAAIFSIHLARHRQNVQDFDLRILVTAAAGYSGAEIEQAIIAGLYQALYAQTPLTTDALV
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
AQMKSTVPLSVSRREDVEKLRAIASERFVSAR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GFLDNIHSLKTFICAFHPIIVIETVEEERVEALLREVVKDLHMPLFEWTVNLGLAPTPG
CCHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC
TKYAPRTNDYARPGANKPIAFENTADPLDVLKYMGQIERNGIFWLKDFAPHLEDPKVIRE
CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH
VRELAEIYGVVNSAMVLTGESITLPKAIAHDAVYFELTLPDGDELYQTLSEVMRELKVRH
HHHHHHHHHHHHCCEEEECCCCCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
KLAITLQGEELNQFVHALSGMTLKQARQAIAYAALIDGELNGADILKVIHRKAQILREES
EEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LLELFPVEENTAKLGGFVGLKQWLKRSQVGFSTAAKRVNLPAPKGILIVGVQGCGKSLAA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHH
KTIAREWQLPLLKLDAGRLYNKFVGESEKNFRQAIKLAESMAPAVLWIDEIEKSFGNPSG
HHHHHHHCCCEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
EGDGGLSLRLFGSFLTWLQEKSQEVFVVATANDLLQLPPELLRKGRFDEIFFVDLPNAQE
CCCCCEEHHHHHHHHHHHHHCCCCEEEEEECCHHHHCCHHHHHCCCCCEEEEEECCCCHH
RAAIFSIHLARHRQNVQDFDLRILVTAAAGYSGAEIEQAIIAGLYQALYAQTPLTTDALV
HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
AQMKSTVPLSVSRREDVEKLRAIASERFVSAR
HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]