| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is terE [H]
Identifier: 170026085
GI number: 170026085
Start: 4273532
End: 4274107
Strand: Reverse
Name: terE [H]
Synonym: YPK_3872
Alternate gene names: 170026085
Gene position: 4274107-4273532 (Counterclockwise)
Preceding gene: 170026086
Following gene: 170026084
Centisome position: 91.14
GC content: 46.53
Gene sequence:
>576_bases ATGGCAGTTTCTCTGGTAAAAGGTGGTAACGTATCTCTGACAAAAGAAGCTCCAACCATGAACATTGCTGTCGTGGGGCT GGGTTGGGATGCACGTGTGACCGATGGTTCTGAATTTGACCTTGATGCCTCGGTATTTATGGTCGGTGAAAACGGCAAAG TTTTGTCTGATCAGCACTTCATCTTCTTTAACAACAAAGTGAGTCCTTGTGGTTCTGTTGTTCATCAGGGTGATAACCGT ACCGGTGCTGGTGACGGTGACGATGAGCAGATCAAAATTGATCTGAAAAAAGTCCCAGCTGACGTGAAGAAAATTATTTT CTCAGTCACCATTTATGATGCTGAAGCCCGTAAGCAAAACTTTGGTATGGTCAGCAACAGCTTCATGCGTGTGGTCAACG AAGATAACAGCGCAGAAATTGCTCGCTTTGACCTATCCGAGGATGCCAGTACTGAAACCGCCATGATCTTTGGCGAGCTA TACCGCAATAATGACGAATGGAAATTTAAAGCTGTCGGTCAGGGTTTTGCCGGTGGTCTGTCTGCGCTGGCAAGCCAGCA TGGTGTGTCGGTATAA
Upstream 100 bases:
>100_bases TACCTGTAACGCCAATCATTTTGGGTGTACAGATTAACGTATTCATATATTCAGGGCAAAATGCTCTGAATATTTAACAC TTCAGTGTAAGGAAAGTACG
Downstream 100 bases:
>100_bases CGACTGCCCGTTTCAATTAAACCCTGCTGCATCGGCAGGTTTTTTTTTCGCTCAATTTTCCTTGTCTACACCATCTAAGC ACAGCTCCTGCTTCGTCTGA
Product: stress protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAVSLVKGGNVSLTKEAPTMNIAVVGLGWDARVTDGSEFDLDASVFMVGENGKVLSDQHFIFFNNKVSPCGSVVHQGDNR TGAGDGDDEQIKIDLKKVPADVKKIIFSVTIYDAEARKQNFGMVSNSFMRVVNEDNSAEIARFDLSEDASTETAMIFGEL YRNNDEWKFKAVGQGFAGGLSALASQHGVSV
Sequences:
>Translated_191_residues MAVSLVKGGNVSLTKEAPTMNIAVVGLGWDARVTDGSEFDLDASVFMVGENGKVLSDQHFIFFNNKVSPCGSVVHQGDNR TGAGDGDDEQIKIDLKKVPADVKKIIFSVTIYDAEARKQNFGMVSNSFMRVVNEDNSAEIARFDLSEDASTETAMIFGEL YRNNDEWKFKAVGQGFAGGLSALASQHGVSV >Mature_190_residues AVSLVKGGNVSLTKEAPTMNIAVVGLGWDARVTDGSEFDLDASVFMVGENGKVLSDQHFIFFNNKVSPCGSVVHQGDNRT GAGDGDDEQIKIDLKKVPADVKKIIFSVTIYDAEARKQNFGMVSNSFMRVVNEDNSAEIARFDLSEDASTETAMIFGELY RNNDEWKFKAVGQGFAGGLSALASQHGVSV
Specific function: Not known; seems to contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB) [H]
COG id: COG2310
COG function: function code T; Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CAPAB/TerDEXZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003325 [H]
Pfam domain/function: PF02342 TerD [H]
EC number: NA
Molecular weight: Translated: 20576; Mature: 20445
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSLVKGGNVSLTKEAPTMNIAVVGLGWDARVTDGSEFDLDASVFMVGENGKVLSDQHF CEEEEEECCCEEEEECCCCEEEEEEEECCCCEECCCCCCCCCEEEEEECCCCCEECCCEE IFFNNKVSPCGSVVHQGDNRTGAGDGDDEQIKIDLKKVPADVKKIIFSVTIYDAEARKQN EEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHEEEEEEEEEECHHHHCC FGMVSNSFMRVVNEDNSAEIARFDLSEDASTETAMIFGELYRNNDEWKFKAVGQGFAGGL CCCHHHHHHEEECCCCCCEEEEEECCCCCCCCHHEEEEHHHCCCCCEEEEEECCCCCHHH SALASQHGVSV HHHHHHCCCCC >Mature Secondary Structure AVSLVKGGNVSLTKEAPTMNIAVVGLGWDARVTDGSEFDLDASVFMVGENGKVLSDQHF EEEEEECCCEEEEECCCCEEEEEEEECCCCEECCCCCCCCCEEEEEECCCCCEECCCEE IFFNNKVSPCGSVVHQGDNRTGAGDGDDEQIKIDLKKVPADVKKIIFSVTIYDAEARKQN EEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHEEEEEEEEEECHHHHCC FGMVSNSFMRVVNEDNSAEIARFDLSEDASTETAMIFGELYRNNDEWKFKAVGQGFAGGL CCCHHHHHHEEECCCCCCEEEEEECCCCCCCCHHEEEEHHHCCCCCEEEEEECCCCCHHH SALASQHGVSV HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665479 [H]