| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170026080
Identifier: 170026080
GI number: 170026080
Start: 4265963
End: 4267282
Strand: Reverse
Name: 170026080
Synonym: YPK_3867
Alternate gene names: NA
Gene position: 4267282-4265963 (Counterclockwise)
Preceding gene: 170026081
Following gene: 170026079
Centisome position: 91.0
GC content: 53.11
Gene sequence:
>1320_bases ATGATGCATACAGAAAACAATTCCCCCCCAGGTTTGATCCCGTTGCCCGATTGGTATCCGGTTGCTTTTTCGCATCTGGA TGCGATGGAGTACGCGAGTGTGACGCGGCTTTGGCACCATGAACCCGTGCTGCGTGATCTGGTAGACGAGCTGGATAAAC GTAATCCGGGGCTGATTACGTTTACGCATTGCCCACATTGTCACAGTGCCGATATTTGCCCCGGCACCCGCCCGGAAGAG TACCGCTGTCGAACCTGCCATCGGTGCAGTTCTCCGTATACGCATACCCCGTTTTTCGATTTACACCATGCCCGACATTC ACGGCTCTATGCGGTACTGGTGACCCTCTGGGGAACCTGGCAAGTGGAGGACGCTGCCTGGTTAAGTGACTGCAAATCCA AACAGATATGGAAGCAGTACTGCCATCGGCTAAAACCCATTCTGGCGTTGATCGGCGGCCGTGCGGTAACCCATACACCT CGCTACTTACGGGGTTTTACACCGGGGCAGCAGGGGTTGCACTGCCCAGCCTGCGCCTCCACGCAATTGGTCTACAGCGA AACCATGCCAGTAGGTAATCCCGAGGTACACTGTCAGGTTTGCCAGACTGATTTTGTGATGTATCCCGACATTCCAAAAG GCATCGACCCGTTTGCAGTCAATACGCCACAGTATGACATCCCGCTTCCCCGCTGGTTCAGCCGCTTGTTTTCTCATGCG AGCCAGGCACAGTACCAACATTTACGGGAGGTCTGGCAACGGGAACCGGTACTGAGAGAGGCAGTGGATCGGCTGGATGC ACAAAATCCTGAACAGGGTGCGGTGTATGCCTGCCCTTACTGCCAGAATAAGCACATCAGCCCACGTAAAACAGCCTCAT CTATTGAGGGGTATTATTGCCCCGCCTGTGATAATCCATTTACGGCCACTACCGGGACGGTATTTACCCGGATGCGTCAG GAGCATTTTTGGCGTTTGTATGCGGTATTGGTGATGCTATGGACACAGTGGCGACCAACACAGATTTTTGAGCTATGTCA GTTACGTTCAGTGCACCCCTTTCTGACTTACCATAAACGGCTCGCTCCGCTACTGGCTGAGTTTGATGGTGCCCCGATCA CGCCATATCCCCGTAATTTACTGGGGTTCACCCCCGGGCAGCAGGGGGTTTGCTGCGTGTATTGCCAATCGACAAAGCTG ATAACGGAAGGGATAACGGTCATGCCACTGGATAACCCCTATATCTGTTGTCTGGACTGTGGACAGCGATTTATGCTGCG GGTCTGGCGAAAACAGGTAAAAAGTAACGAGAAAAAATAA
Upstream 100 bases:
>100_bases GATGTCGAGAAATAAGTTTTGTCAGTGCTTGATAACTTTGGAGCGGCCTCTGATCCCCAGGTGCTATCCGCCTAATGACT TGATTATCATGGAGGATAAT
Downstream 100 bases:
>100_bases ATCCCAAAGAGATGGCTTGCTATTTTAAAAATGAATTTATTATTATTGATAAAATAACAAGCCAGCAAGGGATTGAAAAG TATGTTATTTGATTGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MMHTENNSPPGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHCHSADICPGTRPEE YRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTP RYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDPFAVNTPQYDIPLPRWFSRLFSHA SQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTRMRQ EHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKL ITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK
Sequences:
>Translated_439_residues MMHTENNSPPGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHCHSADICPGTRPEE YRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTP RYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDPFAVNTPQYDIPLPRWFSRLFSHA SQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTRMRQ EHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKL ITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK >Mature_439_residues MMHTENNSPPGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHCHSADICPGTRPEE YRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTP RYLRGFTPGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDPFAVNTPQYDIPLPRWFSRLFSHA SQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTRMRQ EHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKL ITEGITVMPLDNPYICCLDCGQRFMLRVWRKQVKSNEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50720; Mature: 50720
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHTENNSPPGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLIT CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE FTHCPHCHSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTW EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE QVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTPRYLRGFTPGQQGLHCPACAS EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCCCCCCCCCCCCCCC TQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDPFAVNTPQYDIPLPRWFSRLFSHA CEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHH SQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASSIEGYYC HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEC PACDNPFTATTGTVFTRMRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICCLDC HHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCEEHHCCEEEEECCCCEEEEEHH GQRFMLRVWRKQVKSNEKK HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMHTENNSPPGLIPLPDWYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLIT CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE FTHCPHCHSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLWGTW EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCE QVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTPRYLRGFTPGQQGLHCPACAS EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHCCCCCCCCCCCCCCCC TQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDPFAVNTPQYDIPLPRWFSRLFSHA CEEEEECCCCCCCCCEEEEEECCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHH SQAQYQHLREVWQREPVLREAVDRLDAQNPEQGAVYACPYCQNKHISPRKTASSIEGYYC HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCEEC PACDNPFTATTGTVFTRMRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LAPLLAEFDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICCLDC HHHHHHHCCCCCCCCCCCHHCCCCCCCCCEEEEEECCCEEHHCCEEEEECCCCEEEEEHH GQRFMLRVWRKQVKSNEKK HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA