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The map label for this gene is rsgA [H]

Identifier: 170026023

GI number: 170026023

Start: 4196731

End: 4197783

Strand: Direct

Name: rsgA [H]

Synonym: YPK_3809

Alternate gene names: 170026023

Gene position: 4196731-4197783 (Clockwise)

Preceding gene: 170026021

Following gene: 170026024

Centisome position: 89.49

GC content: 50.05

Gene sequence:

>1053_bases
GTGAGCAAGAATAAACTGTCGAAAGGTCAACAACGCCGTGTACAGGCTAATCATCAGCGTAGGCTACGCACTGATAGAAA
ACCTGAGTTAGATGACTCTCAGCTTGGCGATGCGCAAGAAGGTATCGTAATCAGTCGCTTCGGTCAGCATGCCGATGTCG
AGGCCGTTGATGGCACTCAGCACCGTTGTAATATCCGTCGAACCATCAAATCACTGGTGACCGGTGATCGGGTGGTCTGG
CGTCCCGGTTTACAAGCGCAGGAAGGTGTGCGAGTTAAAGGTATCGTTGAAGCCGTTCACGAACGGACATCCGTCCTGAC
TCGCCCAGATCTCTATGATGGTGTGAAACCTATCGCTGCCAATATCGACCAGATCGTGATCGTATCGGCGATCTTACCCG
AGCTTTCACTTAATATTATTGATCGCTATTTGGTGGCGTGCGAAACACTGGAAGTCGAGCCGTTAATCGTCCTGAATAAG
ATTGACCTGTTGGATGCCGATGGCCGTAAATTCGTTGATGGCATGATGGATATTTATCGTCGTATTGGTTACGACGTCTT
GGAAGTCTCCAGCCAGACACGTGAGGGGATGGAAGCCTTTGAGAATGCACTGACTGGCCGTATCAGTATCTTTGCTGGCC
AATCCGGGGTGGGCAAATCCAGCCTATTGAATGCCCTGTTGCCGCCAACAGATAACGAAATTTTGGTCAATACGGTTTCT
GGTAACTCGGGCCTCGGCCAGCACACCACAACCGCCGCACGTCTGTACCATTTCCAACATGGCGGTGATGTGATTGATTC
ACCGGGCGTGCGTGAATTTGGTCTGTGGCATTTAGCTCCGGAACAAATTACTCAAGGGTTTGTCGAATTCCGTGATTATC
TCGGCCATTGCAAATTCCGTGATTGCAGCCATACCAACGATCCCGGCTGTGCATTACGCGAAGCCGTAGAGCAAGGTAAA
ATTGCTGAGGAACGTTTCGATAATTACCATCGAATCCTAGAAAGTATGGAGCAAGCGAAGCCGCGTAAAACGTCAGACAG
TGACGAGAAGTGA

Upstream 100 bases:

>100_bases
CAAAGAACTTGGCGTTGCAAGCAGGTGGCAAGCGAACATTGCTAACACCCCCTACAACGCAAAGTCCGAAGGGGATAAAT
GCAGATTCAAGTGAGGCACA

Downstream 100 bases:

>100_bases
TGCTTAACTAACAGCTTTCTATACGCTTACTGACGTGCAGCAAGTGAACGAGTCCCGATGAGCTTACATCAGTCAGTGAT
TCGGGCGAGCAAACGCCGCT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSKNKLSKGQQRRVQANHQRRLRTDRKPELDDSQLGDAQEGIVISRFGQHADVEAVDGTQHRCNIRRTIKSLVTGDRVVW
RPGLQAQEGVRVKGIVEAVHERTSVLTRPDLYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNK
IDLLDADGRKFVDGMMDIYRRIGYDVLEVSSQTREGMEAFENALTGRISIFAGQSGVGKSSLLNALLPPTDNEILVNTVS
GNSGLGQHTTTAARLYHFQHGGDVIDSPGVREFGLWHLAPEQITQGFVEFRDYLGHCKFRDCSHTNDPGCALREAVEQGK
IAEERFDNYHRILESMEQAKPRKTSDSDEK

Sequences:

>Translated_350_residues
MSKNKLSKGQQRRVQANHQRRLRTDRKPELDDSQLGDAQEGIVISRFGQHADVEAVDGTQHRCNIRRTIKSLVTGDRVVW
RPGLQAQEGVRVKGIVEAVHERTSVLTRPDLYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNK
IDLLDADGRKFVDGMMDIYRRIGYDVLEVSSQTREGMEAFENALTGRISIFAGQSGVGKSSLLNALLPPTDNEILVNTVS
GNSGLGQHTTTAARLYHFQHGGDVIDSPGVREFGLWHLAPEQITQGFVEFRDYLGHCKFRDCSHTNDPGCALREAVEQGK
IAEERFDNYHRILESMEQAKPRKTSDSDEK
>Mature_349_residues
SKNKLSKGQQRRVQANHQRRLRTDRKPELDDSQLGDAQEGIVISRFGQHADVEAVDGTQHRCNIRRTIKSLVTGDRVVWR
PGLQAQEGVRVKGIVEAVHERTSVLTRPDLYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNKI
DLLDADGRKFVDGMMDIYRRIGYDVLEVSSQTREGMEAFENALTGRISIFAGQSGVGKSSLLNALLPPTDNEILVNTVSG
NSGLGQHTTTAARLYHFQHGGDVIDSPGVREFGLWHLAPEQITQGFVEFRDYLGHCKFRDCSHTNDPGCALREAVEQGKI
AEERFDNYHRILESMEQAKPRKTSDSDEK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=351, Percent_Identity=79.2022792022792, Blast_Score=562, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39093; Mature: 38961

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKLSKGQQRRVQANHQRRLRTDRKPELDDSQLGDAQEGIVISRFGQHADVEAVDGTQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCH
HRCNIRRTIKSLVTGDRVVWRPGLQAQEGVRVKGIVEAVHERTSVLTRPDLYDGVKPIAA
HHHHHHHHHHHHHCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH
NIDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNKIDLLDADGRKFVDGMMDIYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH
RIGYDVLEVSSQTREGMEAFENALTGRISIFAGQSGVGKSSLLNALLPPTDNEILVNTVS
HHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEC
GNSGLGQHTTTAARLYHFQHGGDVIDSPGVREFGLWHLAPEQITQGFVEFRDYLGHCKFR
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCHHCCCHHHHHHHHHHHHHHHCCCCCC
DCSHTNDPGCALREAVEQGKIAEERFDNYHRILESMEQAKPRKTSDSDEK
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SKNKLSKGQQRRVQANHQRRLRTDRKPELDDSQLGDAQEGIVISRFGQHADVEAVDGTQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCCH
HRCNIRRTIKSLVTGDRVVWRPGLQAQEGVRVKGIVEAVHERTSVLTRPDLYDGVKPIAA
HHHHHHHHHHHHHCCCCEEECCCCCHHCCCHHHHHHHHHHHHHHHCCCCCHHHCCHHHHH
NIDQIVIVSAILPELSLNIIDRYLVACETLEVEPLIVLNKIDLLDADGRKFVDGMMDIYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHH
RIGYDVLEVSSQTREGMEAFENALTGRISIFAGQSGVGKSSLLNALLPPTDNEILVNTVS
HHCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEC
GNSGLGQHTTTAARLYHFQHGGDVIDSPGVREFGLWHLAPEQITQGFVEFRDYLGHCKFR
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCHHCCCHHHHHHHHHHHHHHHCCCCCC
DCSHTNDPGCALREAVEQGKIAEERFDNYHRILESMEQAKPRKTSDSDEK
CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA