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The map label for this gene is priB [H]

Identifier: 170025998

GI number: 170025998

Start: 4171721

End: 4171888

Strand: Reverse

Name: priB [H]

Synonym: YPK_3783

Alternate gene names: 170025998

Gene position: 4171888-4171721 (Counterclockwise)

Preceding gene: 170025999

Following gene: 170025997

Centisome position: 88.96

GC content: 47.02

Gene sequence:

>168_bases
ATGCCCATAGTCGTTAGCGGACAGCAGTCACAAGCATTAACTCACAGCATAACGGTCGGCAGTCAGTTAACCGTTGAAGG
CTTCATTAGCTGCCATCAAGGTCGCAATGGGCTGAACAAATTGGTTCTGCATGCCGAGCAGATTGAATTTATAGATTCTG
GAGACTAG

Upstream 100 bases:

>100_bases
TCGAAAAGTAAGTCCTTCTGGTATTCCGCATTGTCAATTTGTGCTTGAGCATCGATCAACACAGCAGGAAGCCGGATTTA
GCCGACAAACATGGTGCAGA

Downstream 100 bases:

>100_bases
CCAAATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTTACCGCGGAAGGCGTTGTAGAGATTGATTATAAAGATA
TCGCTACGCTGAAAAACTAT

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MPIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD

Sequences:

>Translated_55_residues
MPIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD
>Mature_54_residues
PIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790645, Length=55, Percent_Identity=72.7272727272727, Blast_Score=93, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 5892; Mature: 5761

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD
CCEEECCCCCCCEEEEEECCCEEEHHHHEEECCCCCCHHHHHCCHHHEEEEECCC
>Mature Secondary Structure 
PIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIEFIDSGD
CEEECCCCCCCEEEEEECCCEEEHHHHEEECCCCCCHHHHHCCHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA