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The map label for this gene is 170025961

Identifier: 170025961

GI number: 170025961

Start: 4138569

End: 4139171

Strand: Reverse

Name: 170025961

Synonym: YPK_3746

Alternate gene names: NA

Gene position: 4139171-4138569 (Counterclockwise)

Preceding gene: 170025962

Following gene: 170025960

Centisome position: 88.27

GC content: 51.08

Gene sequence:

>603_bases
ATGACGCTTACAGAAGAACAGAAGGCGCTTTTCGATGCCCTGACGCAATTACAGCGCAGATTCGTTACAGCGCTGCTAGA
GGGTGCCAATCAAACCGAGGCATACCGAAGAGCTGGCGGTAAAGCTAAAGGTGATGGTGAGCGTTCCAAAGCCAACCAGT
TAGTAACAAATAGTAACGTTCAAGCCTTCCTCCAGTCCGTACAGCACGAAACCGTTAACGAGGCCATCATGACCTACACC
GAAGCATTAGAGCGACTCACGTTGATGGGGCGCACGACAATTCATGACATCGCCACATTTGGCAATTATCAGATTGGTGA
GGACGAGGAAGGGCAACCGGTCTTTCAGGCGTCATGGAAATTTAAGGACTCCAAGAATATTAAGCCCGAACACCTGGCCG
CTGTCGCTGAATTATCCACTGGCAAGGATGGGCTAAAAATTAAGCTGCATGATCCGAAAGCTGCCATCAAGCAACTGGCT
GAAATGTGTGGATGGGAAGCACCGAAGAAAGCCGAATTGACCGGCGCGAACGGTGGCCCGATCCAAACGTCAAACCTAAC
CCCGGATGAAGCCGCCGAAGCCTACCGTAAAATGATGGGGTGA

Upstream 100 bases:

>100_bases
GCTGGGGGGCGCACGTTAACCGATGGCAAGAAATGGTAAGGTTTACTCGCTATCGTGTTAATGAGAAAATGTTATACCGG
TTAAACCTTAAGGGGGCGAA

Downstream 100 bases:

>100_bases
TTTGGGTAAACACCAAAAAATAACCGGTTTGATGGGTAAAACTCCTATGCAAAATAGAGGGTAATTTATGCATCATTTAT
GCACTCAGTTTTCTAACATT

Product: putative phage terminase, small subunit

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKAKGDGERSKANQLVTNSNVQAFLQSVQHETVNEAIMTYT
EALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKNIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLA
EMCGWEAPKKAELTGANGGPIQTSNLTPDEAAEAYRKMMG

Sequences:

>Translated_200_residues
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKAKGDGERSKANQLVTNSNVQAFLQSVQHETVNEAIMTYT
EALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKNIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLA
EMCGWEAPKKAELTGANGGPIQTSNLTPDEAAEAYRKMMG
>Mature_199_residues
TLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKAKGDGERSKANQLVTNSNVQAFLQSVQHETVNEAIMTYTE
ALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWKFKDSKNIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAE
MCGWEAPKKAELTGANGGPIQTSNLTPDEAAEAYRKMMG

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21969; Mature: 21838

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKAKGDGERSKANQLVTNSNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCH
QAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
FKDSKNIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAEMCGWEAPKKAELTGANGGP
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEECCCCCCC
IQTSNLTPDEAAEAYRKMMG
CCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKAKGDGERSKANQLVTNSNV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCH
QAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATFGNYQIGEDEEGQPVFQASWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
FKDSKNIKPEHLAAVAELSTGKDGLKIKLHDPKAAIKQLAEMCGWEAPKKAELTGANGGP
CCCCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCEECCCCCCC
IQTSNLTPDEAAEAYRKMMG
CCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA