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The map label for this gene is yhbQ [C]

Identifier: 170025927

GI number: 170025927

Start: 4100791

End: 4101078

Strand: Direct

Name: yhbQ [C]

Synonym: YPK_3712

Alternate gene names: 170025927

Gene position: 4100791-4101078 (Clockwise)

Preceding gene: 170025926

Following gene: 170025930

Centisome position: 87.45

GC content: 52.08

Gene sequence:

>288_bases
ATGTCAGATAGCCTTTGGCATCTCTATTTGCTGCGTACCGCCAGTGGCATGCTCTATACCGGTATTACCACCGATGTAGC
ACGGCGGTTGGCACAGCATCAGGCGGGGAAAGGGGCAAAAGCGCTGCGGGGCAAAGGGGAGTTAACGTTGGTATTTCATT
GTGAAGCGGGCGACCGTTCGACCGCCTTAAAGCTGGAGTACCGCGTCAAGCAGCTCAGTAAACAGCAAAAAGAAAAGCTG
GTGATTGACCAGCCAAGGTTATTGACAACGCTATTTTTAGCCTCGTGA

Upstream 100 bases:

>100_bases
GCATTAACCCGATTGGCGACGGGTAGATAAAAAGTCAGGATGCAATACGCTGTTCCGGTGATAACATGCCGAACCGTTAC
CCTCGGACTGGAATAAGATT

Downstream 100 bases:

>100_bases
ATGAAGGGTTGACCGCACCTCGGGGCACTCCGGTGGCTTACGCCACTACGACCCCAACGGCACGTTTCCCCTTCAATTGA
CTTTGTCAGCAGTCTGAGCT

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLVFHCEAGDRSTALKLEYRVKQLSKQQKEKL
VIDQPRLLTTLFLAS

Sequences:

>Translated_95_residues
MSDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLVFHCEAGDRSTALKLEYRVKQLSKQQKEKL
VIDQPRLLTTLFLAS
>Mature_94_residues
SDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLVFHCEAGDRSTALKLEYRVKQLSKQQKEKLV
IDQPRLLTTLFLAS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=78, Percent_Identity=73.0769230769231, Blast_Score=118, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022992
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10644; Mature: 10512

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLVFHCEAGDRS
CCCCHHHHHEEHHCCCEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCC
TALKLEYRVKQLSKQQKEKLVIDQPRLLTTLFLAS
CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTLVFHCEAGDRS
CCCHHHHHEEHHCCCEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEECCCCCC
TALKLEYRVKQLSKQQKEKLVIDQPRLLTTLFLAS
CEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA