| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025920
Identifier: 170025920
GI number: 170025920
Start: 4091387
End: 4092553
Strand: Reverse
Name: 170025920
Synonym: YPK_3705
Alternate gene names: NA
Gene position: 4092553-4091387 (Counterclockwise)
Preceding gene: 170025921
Following gene: 170025919
Centisome position: 87.27
GC content: 52.44
Gene sequence:
>1167_bases ATGACGCCAATAAAAACGGCAGTGACAGCAATGAAACTATACACATTGGATGTTAACTGCCTGATCAAAGCTAAGGCGAT ATTGCAGCAGCCTTTTTCACCTCTGCAACCGGCGTTACGTCGGTTATTGAGTGAAGCGGATATATTGCGCGATCAGTCGC CTGAAAGCGTCACCCACAAGACGTTACTGCCTGTCAGTGGTGATATTCACGATTACTATAGTTTTGGCACTTATTGGTGG CCTAACCCGCGCAAGCCTAACGGTTTGCCCTATGTGCGTCGCGACGGGCATACCAACCCGCAGAGCCAGAACGATGATAC GGATACTCAGCGTATCGCACGGATGTGTGACCGCTGTTTGACACTGGGGCTGGCCTACTATTTTACCGGCAATAGCCGCT ATGCACAGGTCGCGGCAGAACAGATCCGTTGCTGGTTTTTGGATGCCAAAACCCGCATGAATCCGCATCTCAATTACGGC CAGGCCATTCCTGGGATTGTGTCCGGGCGCGGCACGGGCTTAATTGATACTCGCATGATGTGGATGGTGATCGACACCCT GGGCCTGATATCACCGGCCAAATTGTTGGATACAGAAGATACGGCGGTATTGCAGCAGTGGTTCCGCGACTTTAACCACT GGATGTTCCACAGCGAAGTGGGCCATTCTGAATATGTCTGGCATAACAATCACGGCACTTGGTATGACGTCCAGCGTGCG GCTAATGCCATGTTCTACGGCGATCGTGGGCTGGTAACCACCATTATCCGTCAAGGGATCACGCAACGATTGGCGGCACA GATTGCGCAAGACGGTAAGCAGTGGATGGAATTGGAGCGCACCGTGCCTTTCCATTACTCCTTGTTTAATATGGAGGCCC ATTTACTGCTGTGCCGCTACGGGGAACATATAGAGATTGATCGCTGGGAATGGGTACAAGACGGTCGCAATGTTCAGCAG GGGGTTGATTATCTGTTGCCGTTTATTGCTGAACCGGAACTGTGGCCTTACCGTGACTTGCGCGGTATTGATTATGACAG CGCATTGCGGCTGCTCTTGCAGGCGGCACGGGGCTACCCCCAGGATGCCAAACGTTATCAAGCCGTCTTAGCCACTTTCC CAGCCGAGACTCTGACATCCCGTGATCGCCTGTTGTGGCAAAGTTGA
Upstream 100 bases:
>100_bases AAACGGTCTATCTGCAACCTAAGCTTGCGGGTATCCATATCTTTGATGCTGCTACGGGGTTGCGGGTTGACTGCCAGGCG GCATAAGGGAGGCCATATTC
Downstream 100 bases:
>100_bases AAGAGGCAAAGTTGAAAGAGGCAAAGTTGAACGAGGAAAAGTTGAACACGGGAAAATTGGCAGGTCAGATCAAATAGTAG AAGAAAATTTCATGTACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWW PNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYG QAIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQ GVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS
Sequences:
>Translated_388_residues MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWW PNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYG QAIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQ GVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS >Mature_387_residues TPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHKTLLPVSGDIHDYYSFGTYWWP NPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCLTLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQ AIPGIVSGRGTGLIDTRMMWMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRAA NAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRYGEHIEIDRWEWVQDGRNVQQG VDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYPQDAKRYQAVLATFPAETLTSRDRLLWQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44932; Mature: 44800
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHK CCCHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH TLLPVSGDIHDYYSFGTYWWPNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCL EECCCCCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH TLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQAIPGIVSGRGTGLIDTRMM HHHHHEEEECCCHHHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHCCCCCCEEEECCCCCEEEHHHH ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRY HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEC GEHIEIDRWEWVQDGRNVQQGVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYP CCCEECCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCC QDAKRYQAVLATFPAETLTSRDRLLWQS HHHHHHHHHHHHCCHHHHCCHHHHCCCC >Mature Secondary Structure TPIKTAVTAMKLYTLDVNCLIKAKAILQQPFSPLQPALRRLLSEADILRDQSPESVTHK CCHHHHHHHHHHEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH TLLPVSGDIHDYYSFGTYWWPNPRKPNGLPYVRRDGHTNPQSQNDDTDTQRIARMCDRCL EECCCCCCHHHHHCCCCEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHH TLGLAYYFTGNSRYAQVAAEQIRCWFLDAKTRMNPHLNYGQAIPGIVSGRGTGLIDTRMM HHHHHEEEECCCHHHHHHHHHHHEEEEECHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WMVIDTLGLISPAKLLDTEDTAVLQQWFRDFNHWMFHSEVGHSEYVWHNNHGTWYDVQRA HHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHCCCCCCEEEECCCCCEEEHHHH ANAMFYGDRGLVTTIIRQGITQRLAAQIAQDGKQWMELERTVPFHYSLFNMEAHLLLCRY HCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEC GEHIEIDRWEWVQDGRNVQQGVDYLLPFIAEPELWPYRDLRGIDYDSALRLLLQAARGYP CCCEECCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHCCCC QDAKRYQAVLATFPAETLTSRDRLLWQS HHHHHHHHHHHHCCHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA