Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170025877

Identifier: 170025877

GI number: 170025877

Start: 4042738

End: 4043274

Strand: Reverse

Name: 170025877

Synonym: YPK_3662

Alternate gene names: NA

Gene position: 4043274-4042738 (Counterclockwise)

Preceding gene: 170025882

Following gene: 170025876

Centisome position: 86.22

GC content: 41.15

Gene sequence:

>537_bases
ATGCCGATTCCTGAGCGTTTAACACCAGGCAAAGCCACTAAAAATCGGACACAGAGACTGCTTAAGTTACTCGACGAGAT
ATCCAGTACACTTGAGGATAATGGTGATCAAGAAAACGAGCGGGTACGAGAGCTCATTTTACAATGGAATGAAATTGCCT
GCCGAGAACATGATTTCCATGAGTTTAGGGATTTTCACGCCTATACCAGCAAAGATGACTTTATTATTTCAGCCCAGAGA
AAAGCTAAATATATCGAAGATTTCCAATATATTGAGTCAATTGAACTGGTCAATGTTATCGCACAAGCTGAAGGTACCGA
ACCCGATATACATTATGCGGTCGATCTTTTGGATAAGAATTTTCCTGATGGCGATGCTTCAGATCTTATATTCTGGCCTA
ACTATTGGTTTCAGGATGAAAATATGCTCCACATTGAACTCACTCCAGAAGAAACTGTGGGCTATCTTATGGCTCGCTCA
GGGAGAACGTTGCAAGGCGCTCCAGAGATTGAATTAAGATACCCCTATTATAACTAA

Upstream 100 bases:

>100_bases
AGAAGGGGTGATCTTTGTCTTCTTTTCGGCGTAACATGCGCTTGATGGTAGATCCCGACAGAGGATAACGTGTCGGATAA
AATCTTTTTAAGGAGAAAAC

Downstream 100 bases:

>100_bases
AATGACGATTAAACTTATCAGTCAACTGACGGCTCTGGTATCAGAGCCGAATAGTATTCACCATGTCTATTTTGCTAAAA
GCCTACGCGCCGCACCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MPIPERLTPGKATKNRTQRLLKLLDEISSTLEDNGDQENERVRELILQWNEIACREHDFHEFRDFHAYTSKDDFIISAQR
KAKYIEDFQYIESIELVNVIAQAEGTEPDIHYAVDLLDKNFPDGDASDLIFWPNYWFQDENMLHIELTPEETVGYLMARS
GRTLQGAPEIELRYPYYN

Sequences:

>Translated_178_residues
MPIPERLTPGKATKNRTQRLLKLLDEISSTLEDNGDQENERVRELILQWNEIACREHDFHEFRDFHAYTSKDDFIISAQR
KAKYIEDFQYIESIELVNVIAQAEGTEPDIHYAVDLLDKNFPDGDASDLIFWPNYWFQDENMLHIELTPEETVGYLMARS
GRTLQGAPEIELRYPYYN
>Mature_177_residues
PIPERLTPGKATKNRTQRLLKLLDEISSTLEDNGDQENERVRELILQWNEIACREHDFHEFRDFHAYTSKDDFIISAQRK
AKYIEDFQYIESIELVNVIAQAEGTEPDIHYAVDLLDKNFPDGDASDLIFWPNYWFQDENMLHIELTPEETVGYLMARSG
RTLQGAPEIELRYPYYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20960; Mature: 20828

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPERLTPGKATKNRTQRLLKLLDEISSTLEDNGDQENERVRELILQWNEIACREHDFH
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHH
EFRDFHAYTSKDDFIISAQRKAKYIEDFQYIESIELVNVIAQAEGTEPDIHYAVDLLDKN
HHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
FPDGDASDLIFWPNYWFQDENMLHIELTPEETVGYLMARSGRTLQGAPEIELRYPYYN
CCCCCCCCEEECCCCEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure 
PIPERLTPGKATKNRTQRLLKLLDEISSTLEDNGDQENERVRELILQWNEIACREHDFH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHH
EFRDFHAYTSKDDFIISAQRKAKYIEDFQYIESIELVNVIAQAEGTEPDIHYAVDLLDKN
HHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
FPDGDASDLIFWPNYWFQDENMLHIELTPEETVGYLMARSGRTLQGAPEIELRYPYYN
CCCCCCCCEEECCCCEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA