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The map label for this gene is yfiR [H]

Identifier: 170025830

GI number: 170025830

Start: 3988372

End: 3988995

Strand: Direct

Name: yfiR [H]

Synonym: YPK_3615

Alternate gene names: 170025830

Gene position: 3988372-3988995 (Clockwise)

Preceding gene: 170025829

Following gene: 170025831

Centisome position: 85.05

GC content: 45.19

Gene sequence:

>624_bases
ATGACTACCGCTACTTGCGCAACCAACCGCGTCAGTGATGAACATCATGAACCTCCGCACAGACGAATTGTACGATCGCG
TTGGTGGGGCGTTTATCTATTCTTACTTTCATTATTGGTGGCTGTACCAACCCCATTATTGGCCGCCAGTAATATCAATG
CAGATATTCTGCGTGAACGTAGCGATGCTGCTGCCAGAATGGTATTAGGTATTATCAGTTATTCACGCTGGCCGGTGGCT
CCGCCAGTGATCAGGTTGTGTGTTATCTCCCCGACGGACTATGCTGAAATGTTATTTAATCCAGCACTGATGGAAACCAC
ACATCCGGTTCAAACTCAACGTTATTCACTTCCCAATAACTCACTCAACAGTAAATGCGATGTGGTTTATTTAGGTCACA
TTGAATTGCAACAGCGCCAGCAGTTATCCATCCAGCTCAACGGAACCCCAATTCTCACCATCAGTGAGGATTATAATGAA
TGCACATTTGGCAGCGTGTTTTGCTTACTTCTGAATGATAAACAAGTCTCTTTTAAGGTCAATATGGATGCATTAGCACG
CGGTGGTGTACGTATTCACCCTAGTGTATTGCAACTTGCCCGTAAGAAGGCTAATGCACGATGA

Upstream 100 bases:

>100_bases
ACTATTATTACATCATATAAATCTTATAATAACGTCGTACCTAACGCCGATTCAACCACCACATTTAGCATCCCTTTTTA
GCCCAACAGGAAGCGCAAAA

Downstream 100 bases:

>100_bases
ACACGATAAACACGATAAAAAACCAATCTATGAAGCCGAAAAAAAATCACAATAGCGCAGAAAAACTCCCGACACTTGCT
GGTGTCTTGCGGCGCATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTTATCATNRVSDEHHEPPHRRIVRSRWWGVYLFLLSLLVAVPTPLLAASNINADILRERSDAAARMVLGIISYSRWPVA
PPVIRLCVISPTDYAEMLFNPALMETTHPVQTQRYSLPNNSLNSKCDVVYLGHIELQQRQQLSIQLNGTPILTISEDYNE
CTFGSVFCLLLNDKQVSFKVNMDALARGGVRIHPSVLQLARKKANAR

Sequences:

>Translated_207_residues
MTTATCATNRVSDEHHEPPHRRIVRSRWWGVYLFLLSLLVAVPTPLLAASNINADILRERSDAAARMVLGIISYSRWPVA
PPVIRLCVISPTDYAEMLFNPALMETTHPVQTQRYSLPNNSLNSKCDVVYLGHIELQQRQQLSIQLNGTPILTISEDYNE
CTFGSVFCLLLNDKQVSFKVNMDALARGGVRIHPSVLQLARKKANAR
>Mature_206_residues
TTATCATNRVSDEHHEPPHRRIVRSRWWGVYLFLLSLLVAVPTPLLAASNINADILRERSDAAARMVLGIISYSRWPVAP
PVIRLCVISPTDYAEMLFNPALMETTHPVQTQRYSLPNNSLNSKCDVVYLGHIELQQRQQLSIQLNGTPILTISEDYNEC
TFGSVFCLLLNDKQVSFKVNMDALARGGVRIHPSVLQLARKKANAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788955, Length=156, Percent_Identity=35.8974358974359, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23251; Mature: 23120

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTATCATNRVSDEHHEPPHRRIVRSRWWGVYLFLLSLLVAVPTPLLAASNINADILRER
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH
SDAAARMVLGIISYSRWPVAPPVIRLCVISPTDYAEMLFNPALMETTHPVQTQRYSLPNN
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHCCHHHCCCCCCCHHEEECCCC
SLNSKCDVVYLGHIELQQRQQLSIQLNGTPILTISEDYNECTFGSVFCLLLNDKQVSFKV
CCCCCCCEEEECCEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEEE
NMDALARGGVRIHPSVLQLARKKANAR
CHHHHHCCCEEECHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTATCATNRVSDEHHEPPHRRIVRSRWWGVYLFLLSLLVAVPTPLLAASNINADILRER
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHH
SDAAARMVLGIISYSRWPVAPPVIRLCVISPTDYAEMLFNPALMETTHPVQTQRYSLPNN
HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHCCHHHCCCCCCCHHEEECCCC
SLNSKCDVVYLGHIELQQRQQLSIQLNGTPILTISEDYNECTFGSVFCLLLNDKQVSFKV
CCCCCCCEEEECCEEECCCCEEEEEECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEEE
NMDALARGGVRIHPSVLQLARKKANAR
CHHHHHCCCEEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]