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The map label for this gene is 170025781

Identifier: 170025781

GI number: 170025781

Start: 3928311

End: 3929297

Strand: Reverse

Name: 170025781

Synonym: YPK_3566

Alternate gene names: NA

Gene position: 3929297-3928311 (Counterclockwise)

Preceding gene: 170025784

Following gene: 170025780

Centisome position: 83.79

GC content: 39.01

Gene sequence:

>987_bases
ATGAGTGACATATTTCCTCAAGCATTATTCGGCGTTGAATATGATCCGGCCTATGGCGAGATTGAGTCCATCCTCTCTCA
ATTAGATGAGTCTGCGGACCCCCTTTCCCGCCCGCATGAACCCCCTCAAATAAACTGGCACCATATCAGTGAGCAAGCCA
ATAAGCTGCTAGAACAATGTTTTGATTTACGTGTAATGCTTTGGTTTATAAGGGCAAATATTCATATAAAAGGAATCTCG
GCCCTCTATGATGGCTTTATGCGCATTAATGCACAAACCCAAGATACTGATGTTGTTATCTACCCTCAATCGGAAGAACC
GCCATTAAATAGTGGGCATGCCGCCGCATTAGGTTGGTTATCTACAGCACAATGTATTGCAGAGCTTAAGACTGCACGCC
TTACAGAAGAGCACCCTTACATTTTACAAGATCTTATTACGACTGAAGCGTTACCCAATGGTCAAGAGAGATATTTTGTT
ACATCTTCGACATTATTTTTAACTGTCAATAATTATTTCCAACAGAATGGATTGCCAGATTTAAAAGACCAATTGACAAA
AGTAGATATGTTGTTGGAACAAATTGAGTCCTATGCAAATCAATCCACAGAGAGTTACCAACTGCATTGTGAACAATTAC
GTATTTTCTTAAAAAATAATATTTCTCAGCTTGCACAATTGAATGCCCCAGAACATGACGATCCCGAAACTGTTTATCAA
AAAATAGACAGTCATGAATCTCTTGATACTCAGTCCTTTAATTCAAATGATAAGAGCATTCGCTCACGGCAAGAGATCAT
TATGATGCTGGACCGTATTCTAGAGTATTTTCAACATTATGAGCCTAGTCATCCAGCCCCAATATTCATTCGCCGTACCA
AAGAGATGATAGGTATGGATTTTTATTCCATTGTTGAAGAAATTCTGCCTGAAGCTGTAATTACATTAAAACAGTTTACC
GGAAAAACTAACCTACCGTTTCGATGA

Upstream 100 bases:

>100_bases
TCATGTACTTGACTTTTAAATTCCACATAAGGTTAGCCTCAACCAGCGAATAGCAAGGAATAGCAAGCTATTTTTGATTT
TAAAACGGATGGACAATAAT

Downstream 100 bases:

>100_bases
GGATATTTAAATGGCCAAAGATGCGAGCTCGCAAAAATTTATCGGTAGAAATAATGCACCTAGAGTGCAAATTGAATATG
ACGTCGAAATTTATGGTTCA

Product: ImpA domain-containing protein

Products: NA

Alternate protein names: Type VI Secretion-Associated Protein ImpA Family

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSDIFPQALFGVEYDPAYGEIESILSQLDESADPLSRPHEPPQINWHHISEQANKLLEQCFDLRVMLWFIRANIHIKGIS
ALYDGFMRINAQTQDTDVVIYPQSEEPPLNSGHAAALGWLSTAQCIAELKTARLTEEHPYILQDLITTEALPNGQERYFV
TSSTLFLTVNNYFQQNGLPDLKDQLTKVDMLLEQIESYANQSTESYQLHCEQLRIFLKNNISQLAQLNAPEHDDPETVYQ
KIDSHESLDTQSFNSNDKSIRSRQEIIMMLDRILEYFQHYEPSHPAPIFIRRTKEMIGMDFYSIVEEILPEAVITLKQFT
GKTNLPFR

Sequences:

>Translated_328_residues
MSDIFPQALFGVEYDPAYGEIESILSQLDESADPLSRPHEPPQINWHHISEQANKLLEQCFDLRVMLWFIRANIHIKGIS
ALYDGFMRINAQTQDTDVVIYPQSEEPPLNSGHAAALGWLSTAQCIAELKTARLTEEHPYILQDLITTEALPNGQERYFV
TSSTLFLTVNNYFQQNGLPDLKDQLTKVDMLLEQIESYANQSTESYQLHCEQLRIFLKNNISQLAQLNAPEHDDPETVYQ
KIDSHESLDTQSFNSNDKSIRSRQEIIMMLDRILEYFQHYEPSHPAPIFIRRTKEMIGMDFYSIVEEILPEAVITLKQFT
GKTNLPFR
>Mature_327_residues
SDIFPQALFGVEYDPAYGEIESILSQLDESADPLSRPHEPPQINWHHISEQANKLLEQCFDLRVMLWFIRANIHIKGISA
LYDGFMRINAQTQDTDVVIYPQSEEPPLNSGHAAALGWLSTAQCIAELKTARLTEEHPYILQDLITTEALPNGQERYFVT
SSTLFLTVNNYFQQNGLPDLKDQLTKVDMLLEQIESYANQSTESYQLHCEQLRIFLKNNISQLAQLNAPEHDDPETVYQK
IDSHESLDTQSFNSNDKSIRSRQEIIMMLDRILEYFQHYEPSHPAPIFIRRTKEMIGMDFYSIVEEILPEAVITLKQFTG
KTNLPFR

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37841; Mature: 37710

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIFPQALFGVEYDPAYGEIESILSQLDESADPLSRPHEPPQINWHHISEQANKLLEQC
CCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FDLRVMLWFIRANIHIKGISALYDGFMRINAQTQDTDVVIYPQSEEPPLNSGHAAALGWL
HHHHHHHHHHHHCCEEEHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
STAQCIAELKTARLTEEHPYILQDLITTEALPNGQERYFVTSSTLFLTVNNYFQQNGLPD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHCCCCH
LKDQLTKVDMLLEQIESYANQSTESYQLHCEQLRIFLKNNISQLAQLNAPEHDDPETVYQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KIDSHESLDTQSFNSNDKSIRSRQEIIMMLDRILEYFQHYEPSHPAPIFIRRTKEMIGMD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCH
FYSIVEEILPEAVITLKQFTGKTNLPFR
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDIFPQALFGVEYDPAYGEIESILSQLDESADPLSRPHEPPQINWHHISEQANKLLEQC
CCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FDLRVMLWFIRANIHIKGISALYDGFMRINAQTQDTDVVIYPQSEEPPLNSGHAAALGWL
HHHHHHHHHHHHCCEEEHHHHHHHHHHEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
STAQCIAELKTARLTEEHPYILQDLITTEALPNGQERYFVTSSTLFLTVNNYFQQNGLPD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHCCCCH
LKDQLTKVDMLLEQIESYANQSTESYQLHCEQLRIFLKNNISQLAQLNAPEHDDPETVYQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
KIDSHESLDTQSFNSNDKSIRSRQEIIMMLDRILEYFQHYEPSHPAPIFIRRTKEMIGMD
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHCCH
FYSIVEEILPEAVITLKQFTGKTNLPFR
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA