| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fabG [H]
Identifier: 170025635
GI number: 170025635
Start: 3752603
End: 3753373
Strand: Reverse
Name: fabG [H]
Synonym: YPK_3420
Alternate gene names: 170025635
Gene position: 3753373-3752603 (Counterclockwise)
Preceding gene: 170025636
Following gene: 170025634
Centisome position: 80.04
GC content: 49.94
Gene sequence:
>771_bases ATGCCAAACGACTATAAATGGTTTGATACGGCGTTTTCTCTGAGTGGCAAAGTGGCGGCCATTACCGGCGGTGCCACGGG GATTGGTCACGCGATTGCCGAACTGTACTTAGCCAAAGGTGCACGAGTGGTGTTGATGGATTGTGCCGATAATGTCGCTG AAATAGCCGAACAACTGGACAGGGATAATGCCGTCGGATTGCATTGCGATGTGAGTGATAGCCAATCCGTCAGACAGGCG GTCGCTCAGGCAATCGGGGCTTTTGGCCAGTTGGATATTTTAGTGAATAGCGCCGGTATTGCTGCGCTGGATCCTGCGGA AAAAGTGCGTGAACAAGATTGGGACAGAACGATTGATATCAACCTGAAAGGGGTCTTTCTCATGTGCCAGGAAGTGGGAA AACATTTTATTCAGCATGGGCATGGCAAAATCGTCAATTTAGCTTCTCAAGCGGGTGTTGTGGCGCTCCCTAATCACTTG GCGTATTGCGCCAGTAAATTTGGCGTGATTGGTATCACCAAAGTACTGGCATTAGAGTGGGGTCCGTTGGACATACAGGT TAATGCGATTTCACCGACCGTGGTGCTGACCGCGTTAGGCCAGAAAGCGTGGTCAGGCCAACTCGCTGAAGATATGAAGC TGAAAATACCCGCTCGTCGTTTTGCTTATCCCGCCGAAGTTGCAGCGTGCGCACTGTTCTTAGCCAGTGATGCAGCCAAT ATGATAACCGGTGAAAATTTAGTCATTGATGGTGGGTATACCATCCAATAG
Upstream 100 bases:
>100_bases CTCACTTAAAGTGGTTCTCAATCCCAACCTAACCTAATCAGTGCTTATTTCCTGAGTCAGGGTGGATCACGAAGAAGGGG TATGAATAAGGAATATAAAG
Downstream 100 bases:
>100_bases TGCTGTCGTTGCGCGCGCTAAATTACCGCGGCATCCAGTTAACTCACCCACTGTTTTTATTTATTTTCCATTTTAACGAG ATTGCTATGAATCGAATTAT
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPNDYKWFDTAFSLSGKVAAITGGATGIGHAIAELYLAKGARVVLMDCADNVAEIAEQLDRDNAVGLHCDVSDSQSVRQA VAQAIGAFGQLDILVNSAGIAALDPAEKVREQDWDRTIDINLKGVFLMCQEVGKHFIQHGHGKIVNLASQAGVVALPNHL AYCASKFGVIGITKVLALEWGPLDIQVNAISPTVVLTALGQKAWSGQLAEDMKLKIPARRFAYPAEVAACALFLASDAAN MITGENLVIDGGYTIQ
Sequences:
>Translated_256_residues MPNDYKWFDTAFSLSGKVAAITGGATGIGHAIAELYLAKGARVVLMDCADNVAEIAEQLDRDNAVGLHCDVSDSQSVRQA VAQAIGAFGQLDILVNSAGIAALDPAEKVREQDWDRTIDINLKGVFLMCQEVGKHFIQHGHGKIVNLASQAGVVALPNHL AYCASKFGVIGITKVLALEWGPLDIQVNAISPTVVLTALGQKAWSGQLAEDMKLKIPARRFAYPAEVAACALFLASDAAN MITGENLVIDGGYTIQ >Mature_255_residues PNDYKWFDTAFSLSGKVAAITGGATGIGHAIAELYLAKGARVVLMDCADNVAEIAEQLDRDNAVGLHCDVSDSQSVRQAV AQAIGAFGQLDILVNSAGIAALDPAEKVREQDWDRTIDINLKGVFLMCQEVGKHFIQHGHGKIVNLASQAGVVALPNHLA YCASKFGVIGITKVLALEWGPLDIQVNAISPTVVLTALGQKAWSGQLAEDMKLKIPARRFAYPAEVAACALFLASDAANM ITGENLVIDGGYTIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=37.3983739837398, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI19923817, Length=255, Percent_Identity=32.9411764705882, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=33.6065573770492, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI31542939, Length=200, Percent_Identity=36.5, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI4758504, Length=260, Percent_Identity=33.0769230769231, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=33.0645161290323, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=30.6772908366534, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=32.0833333333333, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=32.15859030837, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI224922801, Length=173, Percent_Identity=36.9942196531792, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=31.1740890688259, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI83715985, Length=257, Percent_Identity=31.5175097276265, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI5031737, Length=256, Percent_Identity=30.859375, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI4503301, Length=251, Percent_Identity=31.0756972111554, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI66933014, Length=248, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI4504505, Length=196, Percent_Identity=27.0408163265306, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI33667109, Length=197, Percent_Identity=32.48730964467, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=32.0441988950276, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI142976729, Length=242, Percent_Identity=25.2066115702479, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4503817, Length=189, Percent_Identity=29.1005291005291, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI20149619, Length=211, Percent_Identity=27.9620853080569, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI22507405, Length=208, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI210032110, Length=195, Percent_Identity=25.1282051282051, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI7706318, Length=211, Percent_Identity=26.0663507109005, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI223718074, Length=136, Percent_Identity=33.0882352941176, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI157739938, Length=193, Percent_Identity=25.3886010362694, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI40807363, Length=201, Percent_Identity=24.3781094527363, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789208, Length=254, Percent_Identity=35.8267716535433, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=38.0392156862745, Blast_Score=147, Evalue=8e-37, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=33.6099585062241, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=33.0677290836653, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=32.4110671936759, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=32.2709163346614, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=31.4285714285714, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=29.6747967479675, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=28.8537549407115, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=31.6, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=28.2786885245902, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=30.8943089430894, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787526, Length=241, Percent_Identity=24.4813278008299, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787545, Length=255, Percent_Identity=28.2352941176471, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534694, Length=260, Percent_Identity=36.1538461538462, Blast_Score=135, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=33.739837398374, Blast_Score=128, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=34.7107438016529, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17561402, Length=261, Percent_Identity=32.5670498084291, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=33.7349397590361, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=31.2977099236641, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=30.1526717557252, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=30.5343511450382, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=32.0610687022901, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=31.1538461538462, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=31.6205533596838, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=33.203125, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30.4, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=29.7709923664122, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=32.0158102766798, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=30, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=30.1526717557252, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=26.615969581749, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=29.277566539924, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=33.0708661417323, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=28.6259541984733, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538182, Length=259, Percent_Identity=30.5019305019305, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563726, Length=267, Percent_Identity=28.4644194756554, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17544670, Length=272, Percent_Identity=29.0441176470588, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.2442748091603, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=29.811320754717, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=26.2172284644195, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17565030, Length=265, Percent_Identity=27.9245283018868, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71982365, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193203117, Length=204, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=25.6603773584906, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=28.125, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=26.9430051813472, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17508895, Length=185, Percent_Identity=28.1081081081081, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=170, Percent_Identity=28.8235294117647, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17567345, Length=172, Percent_Identity=26.1627906976744, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=28.2258064516129, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=26.1780104712042, Blast_Score=83, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6323882, Length=206, Percent_Identity=31.5533980582524, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6322067, Length=185, Percent_Identity=30.2702702702703, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24643142, Length=256, Percent_Identity=35.9375, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=35.7723577235772, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=35.1778656126482, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=32.8, Blast_Score=110, Evalue=6e-25, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=31.6, Blast_Score=109, Evalue=1e-24, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=32.1428571428571, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=30.1587301587302, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI18859837, Length=225, Percent_Identity=30.6666666666667, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI24644337, Length=173, Percent_Identity=35.2601156069364, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281364892, Length=194, Percent_Identity=30.4123711340206, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=32.2709163346614, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI21358495, Length=207, Percent_Identity=28.0193236714976, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI21355631, Length=171, Percent_Identity=28.0701754385965, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=28.2828282828283, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24640492, Length=225, Percent_Identity=27.1111111111111, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24665243, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24665247, Length=185, Percent_Identity=29.7297297297297, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221331218, Length=174, Percent_Identity=30.4597701149425, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI221331216, Length=175, Percent_Identity=30.2857142857143, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24581726, Length=199, Percent_Identity=27.1356783919598, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641388, Length=200, Percent_Identity=32, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27115; Mature: 26984
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDYKWFDTAFSLSGKVAAITGGATGIGHAIAELYLAKGARVVLMDCADNVAEIAEQLD CCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC RDNAVGLHCDVSDSQSVRQAVAQAIGAFGQLDILVNSAGIAALDPAEKVREQDWDRTIDI CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHHHHHCCCCEEEEE NLKGVFLMCQEVGKHFIQHGHGKIVNLASQAGVVALPNHLAYCASKFGVIGITKVLALEW EECHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCHHHHHHHHHCCHHHHHHHHEEEC GPLDIQVNAISPTVVLTALGQKAWSGQLAEDMKLKIPARRFAYPAEVAACALFLASDAAN CCEEEEEEECCCEEEEEECCCHHCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHCCHH MITGENLVIDGGYTIQ HCCCCEEEEECCEEEC >Mature Secondary Structure PNDYKWFDTAFSLSGKVAAITGGATGIGHAIAELYLAKGARVVLMDCADNVAEIAEQLD CCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC RDNAVGLHCDVSDSQSVRQAVAQAIGAFGQLDILVNSAGIAALDPAEKVREQDWDRTIDI CCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCEEECHHHHHHHCCCCEEEEE NLKGVFLMCQEVGKHFIQHGHGKIVNLASQAGVVALPNHLAYCASKFGVIGITKVLALEW EECHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCHHHHHHHHHCCHHHHHHHHEEEC GPLDIQVNAISPTVVLTALGQKAWSGQLAEDMKLKIPARRFAYPAEVAACALFLASDAAN CCEEEEEEECCCEEEEEECCCHHCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHCCHH MITGENLVIDGGYTIQ HCCCCEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]