| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is ycgS [C]
Identifier: 170025633
GI number: 170025633
Start: 3750834
End: 3751508
Strand: Reverse
Name: ycgS [C]
Synonym: YPK_3418
Alternate gene names: 170025633
Gene position: 3751508-3750834 (Counterclockwise)
Preceding gene: 170025634
Following gene: 170025624
Centisome position: 80.0
GC content: 50.67
Gene sequence:
>675_bases ATGAAGGCATTGTTGATAACCGATGGATCTATAAAAGATAAGTGCATAACCGACGGTACCCCGATCATTGAAGAGATGGC CAATACGATCCTCGCCAACCGTGAATACCTGAGTGAAATTGACGGTGCTATTGGTGATGGTGACCACGGCATTAATATGG CGAAAGGTTTCAACCTTTGCGCTGAAAATATCAAAGGCAAAAATCTGACGCTCGCTGAGGCGCTGGATGCGCTCTCTGAC GCGCTGATGGAAGGCATCGGGGGATCGATGGGGCCACTTTATGGCAGCATTTTTATGGGAATGGCCGAGAGTATTCGTGG GTGCGATAAAATGGATGCGGTGGCTTTTGGTGCGATGTTAAAAGGTGGCCTGGCTGACTTGCAAGAGGTGACTGATGCCC GTGTGGGTGACAAATGCATTATGGATACGCTTATTCCGGCGAGTGCGGCATTTGAATTGGCACAACAACAGCAACAGTCG TTTGTTGAATCGCTACATCGGATGAAACATGCGGCCAGTATGGGGCGCGATTCCACCCTTGATCTCGTGGCTAAAATTGG GCGGGCCAGCCGTCTGGGTGAACGTTCTCGGGGAGTTCTGGATGCTGGGGCAACTTCATGTTGCTTAATACTGACTCAAC TGGCGGATTCTGTAGAACGGCGGTTGGTGCCATAG
Upstream 100 bases:
>100_bases GGGGGTCACGCTGACGCTGATGAAACTGGATGATGAATTAAAATCTTTAATTGATGTACCCACTCATTCATTAGGCTTAA CCCAGTTGGAGTAAGGGATT
Downstream 100 bases:
>100_bases AGAGCGGCCAGCAGCAGTACTGACCGTGGTATTCAGGTGAAGAAGCGATGTGGGCACTCAGTCACGAGACTGCCCCAATC GCTATTGGTCTTTTTATCTC
Product: dihydroxyacetone kinase, L subunit
Products: ADP; glycerone phosphate
Alternate protein names: ORFC [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKALLITDGSIKDKCITDGTPIIEEMANTILANREYLSEIDGAIGDGDHGINMAKGFNLCAENIKGKNLTLAEALDALSD ALMEGIGGSMGPLYGSIFMGMAESIRGCDKMDAVAFGAMLKGGLADLQEVTDARVGDKCIMDTLIPASAAFELAQQQQQS FVESLHRMKHAASMGRDSTLDLVAKIGRASRLGERSRGVLDAGATSCCLILTQLADSVERRLVP
Sequences:
>Translated_224_residues MKALLITDGSIKDKCITDGTPIIEEMANTILANREYLSEIDGAIGDGDHGINMAKGFNLCAENIKGKNLTLAEALDALSD ALMEGIGGSMGPLYGSIFMGMAESIRGCDKMDAVAFGAMLKGGLADLQEVTDARVGDKCIMDTLIPASAAFELAQQQQQS FVESLHRMKHAASMGRDSTLDLVAKIGRASRLGERSRGVLDAGATSCCLILTQLADSVERRLVP >Mature_224_residues MKALLITDGSIKDKCITDGTPIIEEMANTILANREYLSEIDGAIGDGDHGINMAKGFNLCAENIKGKNLTLAEALDALSD ALMEGIGGSMGPLYGSIFMGMAESIRGCDKMDAVAFGAMLKGGLADLQEVTDARVGDKCIMDTLIPASAAFELAQQQQQS FVESLHRMKHAASMGRDSTLDLVAKIGRASRLGERSRGVLDAGATSCCLILTQLADSVERRLVP
Specific function: Unknown
COG id: COG2376
COG function: function code G; Dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
Organism=Escherichia coli, GI1787449, Length=182, Percent_Identity=31.3186813186813, Blast_Score=89, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323570, Length=191, Percent_Identity=28.2722513089005, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR012737 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: 2.7.1.29
Molecular weight: Translated: 23685; Mature: 23685
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLITDGSIKDKCITDGTPIIEEMANTILANREYLSEIDGAIGDGDHGINMAKGFNLC CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AENIKGKNLTLAEALDALSDALMEGIGGSMGPLYGSIFMGMAESIRGCDKMDAVAFGAML HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KGGLADLQEVTDARVGDKCIMDTLIPASAAFELAQQQQQSFVESLHRMKHAASMGRDSTL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DLVAKIGRASRLGERSRGVLDAGATSCCLILTQLADSVERRLVP HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKALLITDGSIKDKCITDGTPIIEEMANTILANREYLSEIDGAIGDGDHGINMAKGFNLC CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH AENIKGKNLTLAEALDALSDALMEGIGGSMGPLYGSIFMGMAESIRGCDKMDAVAFGAML HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH KGGLADLQEVTDARVGDKCIMDTLIPASAAFELAQQQQQSFVESLHRMKHAASMGRDSTL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH DLVAKIGRASRLGERSRGVLDAGATSCCLILTQLADSVERRLVP HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; glycerone
Specific reaction: ATP + glycerone = ADP + glycerone phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7703858 [H]