| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is ybeL [H]
Identifier: 170025235
GI number: 170025235
Start: 3315340
End: 3315822
Strand: Reverse
Name: ybeL [H]
Synonym: YPK_3014
Alternate gene names: 170025235
Gene position: 3315822-3315340 (Counterclockwise)
Preceding gene: 170025249
Following gene: 170025225
Centisome position: 70.71
GC content: 49.07
Gene sequence:
>483_bases ATGAACAAGATAGCTCAGTACTACCGTGAGTTAGTGGCATCGCTGACCGAACGCTTGAAAAATGGTGAACGTGATATTGA TCAACTGGTGGAAAGCGCCGAACGGCGGTTGCATACAGTTGAAGAGTTAACCCGCAACGATGTCGAGCAGATTGTTCAGG CAGTACGACGTGACTTGGAGGAGTTTGCCCGTAGCTATGAAGAGAGCAAGGAAGAGTTTCGCGATAGCGTATTCATGAGA GTGATTAAAGAAAGTCTGTGGCAGGAGCTGGCTGATATCACAGATAAAACACAGCTAGAGTGGCGCGAGGTCTTTAAAGA CGTAAGTCACCATGGGGTTTATCACAGTGGTGAAGTTGTTGGGCTGGGGAATTTGGTCTGCGAAAAATGCCATTATCACC TGGCTTTCTATACGCCGGAAGTCCTCCCCGTCTGCCCTAAATGTGGGCATGACCAGTTTACTCGCCGCCCATTCCAGCCA TGA
Upstream 100 bases:
>100_bases AAAGTGAGGGGGGCCACAACCTGATGACGACATGACTTCAGTTATTTACGACTAGAATAATTTATAATTGAACATCATAA CCGTGGATCGAGGAGACAGT
Downstream 100 bases:
>100_bases TAGGGGAAGTAGCGCCACTGCGGTCGCCAAAAGAACAGAGTAAGAAATAAGGAAAAAGTAAAAAATCAGAAAAGATAAGA AGTCATAAAAAATAAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTRNDVEQIVQAVRRDLEEFARSYEESKEEFRDSVFMR VIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVVGLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP
Sequences:
>Translated_160_residues MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTRNDVEQIVQAVRRDLEEFARSYEESKEEFRDSVFMR VIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVVGLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP >Mature_160_residues MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTRNDVEQIVQAVRRDLEEFARSYEESKEEFRDSVFMR VIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVVGLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=160, Percent_Identity=78.75, Blast_Score=268, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 18942; Mature: 18942
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTRNDVEQIVQAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFARSYEESKEEFRDSVFMRVIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH GLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure MNKIAQYYRELVASLTERLKNGERDIDQLVESAERRLHTVEELTRNDVEQIVQAVRRDLE CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFARSYEESKEEFRDSVFMRVIKESLWQELADITDKTQLEWREVFKDVSHHGVYHSGEVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH GLGNLVCEKCHYHLAFYTPEVLPVCPKCGHDQFTRRPFQP HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]