Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is pgl [H]

Identifier: 170025155

GI number: 170025155

Start: 3231875

End: 3232879

Strand: Reverse

Name: pgl [H]

Synonym: YPK_2933

Alternate gene names: 170025155

Gene position: 3232879-3231875 (Counterclockwise)

Preceding gene: 170025157

Following gene: 170025153

Centisome position: 68.94

GC content: 51.54

Gene sequence:

>1005_bases
ATGAAGCAAGCGGTTTACGTGGCAAGTCCAGACAGCCAACAAATTCATGTCTGGCAATTAGATTCAGCCGGTGAATTAAC
CTTATTGCAAACCGTGGACGTGCCGGGTCAGGTACAGCCGATGGCAATAAGCCCTAATCAGCGCCATCTGTATGTCGGGG
TTCGTCCTGATTTTGGTATTGTCAGCTATCACATTGCCGATGATGGTACGCTGACCGCCGCAGGTATGGCACCGCTTCCC
GGCAGCCCGACTCACATTGACACCGATCGACAAGGTCGCTTCTTGTTCTCTGCTTCTTACAGTTTCAATTGCGTCAGTAT
TAGCCCTATTGATACGCATGGCGTAGTGCAAGCACCTATTCAGCAATTGGATGACCTGCCCGCGCCACATTCGGCGAATA
TTGACCCGACCAATCAGATCTTGCTGGTTCCTTGCCTGAAAGAGGATAAGGTACGGCTATTTGATTTGAGCGCGGAGGGG
CAGTTAACCCCCCATGCACAGGCTGATATTACTGTTGCCGCCGGCGCTGGCCCACGTCATATGGCGTTCCACCCGAATCA
TCAGGTTGCTTATTGTGTCAACGAACTCAATAGCTCGGTGGATGTGTATCAAATCAGCAATAACGGTCAGGAATACCACT
TAGTGCAGAGCCTGGACGCGATGCCTGCCGATTTCACCGGGACACGTTGGGCGGCGGATATTCATATCACGCCTAATGGC
CGCTATTTATACATCAGTGACCGTACCGCCAACCTGTTGGGTATTTTCACCGTTTCTAAAGATGGCCGGGTGATTTCGTT
GGTCGGGCACCACCTGACCGAAGCCCAACCACGTGGTTTCAATATCGACCACAGTGGTAATTTCCTGATTGCTTCCGGTC
AGAAATCTGATCATATCGAAGTTTATCGTATCGATCAGAACACGGGGGAGCTAACCACCCTGAAACGTTATCCGGTAGGT
AAGGGGCCGATGTGGGTCAGTATCCGGGGGGCGCAGAACTCATAA

Upstream 100 bases:

>100_bases
AATTAACCGTTAATAAAAGATATTTGGTTAAGGCGAAGGGGCTGGAACAGGTCAATTCACCTTAATAGCGTTACCCAACA
GGTTCGACTAAGGAGTAAAG

Downstream 100 bases:

>100_bases
ACAATAGGCCATTTTACTGACTATTTTGAACCTGAGCAGAGCCGGTCACCCTGATGTACGCTTGGGTGACTGTGCACTGC
CCATGTCTAAATTGACGGCG

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: 6-P-gluconolactonase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP
GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG
QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG
RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG
KGPMWVSIRGAQNS

Sequences:

>Translated_334_residues
MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP
GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG
QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG
RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG
KGPMWVSIRGAQNS
>Mature_334_residues
MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP
GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG
QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG
RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG
KGPMWVSIRGAQNS

Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=329, Percent_Identity=56.5349544072948, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022528
- InterPro:   IPR019405
- InterPro:   IPR011045
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: =3.1.1.31 [H]

Molecular weight: Translated: 36445; Mature: 36445

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI
CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE
VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI
EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH
QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC
MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG
EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC
RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE
CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE
VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS
EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI
CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE
VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI
EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH
QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC
MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG
EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC
RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE
CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE
VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS
EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA