| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is pgl [H]
Identifier: 170025155
GI number: 170025155
Start: 3231875
End: 3232879
Strand: Reverse
Name: pgl [H]
Synonym: YPK_2933
Alternate gene names: 170025155
Gene position: 3232879-3231875 (Counterclockwise)
Preceding gene: 170025157
Following gene: 170025153
Centisome position: 68.94
GC content: 51.54
Gene sequence:
>1005_bases ATGAAGCAAGCGGTTTACGTGGCAAGTCCAGACAGCCAACAAATTCATGTCTGGCAATTAGATTCAGCCGGTGAATTAAC CTTATTGCAAACCGTGGACGTGCCGGGTCAGGTACAGCCGATGGCAATAAGCCCTAATCAGCGCCATCTGTATGTCGGGG TTCGTCCTGATTTTGGTATTGTCAGCTATCACATTGCCGATGATGGTACGCTGACCGCCGCAGGTATGGCACCGCTTCCC GGCAGCCCGACTCACATTGACACCGATCGACAAGGTCGCTTCTTGTTCTCTGCTTCTTACAGTTTCAATTGCGTCAGTAT TAGCCCTATTGATACGCATGGCGTAGTGCAAGCACCTATTCAGCAATTGGATGACCTGCCCGCGCCACATTCGGCGAATA TTGACCCGACCAATCAGATCTTGCTGGTTCCTTGCCTGAAAGAGGATAAGGTACGGCTATTTGATTTGAGCGCGGAGGGG CAGTTAACCCCCCATGCACAGGCTGATATTACTGTTGCCGCCGGCGCTGGCCCACGTCATATGGCGTTCCACCCGAATCA TCAGGTTGCTTATTGTGTCAACGAACTCAATAGCTCGGTGGATGTGTATCAAATCAGCAATAACGGTCAGGAATACCACT TAGTGCAGAGCCTGGACGCGATGCCTGCCGATTTCACCGGGACACGTTGGGCGGCGGATATTCATATCACGCCTAATGGC CGCTATTTATACATCAGTGACCGTACCGCCAACCTGTTGGGTATTTTCACCGTTTCTAAAGATGGCCGGGTGATTTCGTT GGTCGGGCACCACCTGACCGAAGCCCAACCACGTGGTTTCAATATCGACCACAGTGGTAATTTCCTGATTGCTTCCGGTC AGAAATCTGATCATATCGAAGTTTATCGTATCGATCAGAACACGGGGGAGCTAACCACCCTGAAACGTTATCCGGTAGGT AAGGGGCCGATGTGGGTCAGTATCCGGGGGGCGCAGAACTCATAA
Upstream 100 bases:
>100_bases AATTAACCGTTAATAAAAGATATTTGGTTAAGGCGAAGGGGCTGGAACAGGTCAATTCACCTTAATAGCGTTACCCAACA GGTTCGACTAAGGAGTAAAG
Downstream 100 bases:
>100_bases ACAATAGGCCATTTTACTGACTATTTTGAACCTGAGCAGAGCCGGTCACCCTGATGTACGCTTGGGTGACTGTGCACTGC CCATGTCTAAATTGACGGCG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS
Sequences:
>Translated_334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS >Mature_334_residues MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGIVSYHIADDGTLTAAGMAPLP GSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPIQQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEG QLTPHAQADITVAAGAGPRHMAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIEVYRIDQNTGELTTLKRYPVG KGPMWVSIRGAQNS
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=329, Percent_Identity=56.5349544072948, Blast_Score=380, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 36445; Mature: 36445
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC >Mature Secondary Structure MKQAVYVASPDSQQIHVWQLDSAGELTLLQTVDVPGQVQPMAISPNQRHLYVGVRPDFGI CCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE VSYHIADDGTLTAAGMAPLPGSPTHIDTDRQGRFLFSASYSFNCVSISPIDTHGVVQAPI EEEEEECCCEEEECCCCCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHH QQLDDLPAPHSANIDPTNQILLVPCLKEDKVRLFDLSAEGQLTPHAQADITVAAGAGPRH HHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCC MAFHPNHQVAYCVNELNSSVDVYQISNNGQEYHLVQSLDAMPADFTGTRWAADIHITPNG EEECCCCCEEEEEHHHCCCEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEEEEECCCC RYLYISDRTANLLGIFTVSKDGRVISLVGHHLTEAQPRGFNIDHSGNFLIASGQKSDHIE CEEEEECCCCEEEEEEEECCCCCEEEEECCHHCCCCCCCEECCCCCCEEEECCCCCCCEE VYRIDQNTGELTTLKRYPVGKGPMWVSIRGAQNS EEEEECCCCCEEEEEECCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA