| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fcuA [H]
Identifier: 170024694
GI number: 170024694
Start: 2702505
End: 2704811
Strand: Reverse
Name: fcuA [H]
Synonym: YPK_2469
Alternate gene names: 170024694
Gene position: 2704811-2702505 (Counterclockwise)
Preceding gene: 170024697
Following gene: 170024688
Centisome position: 57.68
GC content: 49.37
Gene sequence:
>2307_bases ATGGGTATCAACACGATGAATCAGTCTCTCTCCATAAATACGGAGCCGAAACGTTCGGCTCCTCGTCTTTTGTGCGTCAT GATCGGCGTAGCATTAGGATCTTTATCCGCATCTTCATGGTCCGCAGCAGTGGCTAACAGTACTAAAACGGCCAGCGCAG TCGCAGAGACCAACAGCGCCGAGAGTAGCAATAAAGCGGATACCATTACCGTGGTTGGGACACCAGACACGTTCCGTGCA GGGGGGAATGATTTGATCCCGACCTATCTGGATGGACAGGTGGCTAATGGTGGCCGTATTGGTTTTCTGGGGCAGCAAGA TGCCCGTAACGTGCCATTCAATATTATCGGTTACACCTCGAAAATGATCGAAGATCAGCAAGCGGCGACCATTGCTGATG TGGTCAAAAATGACGCTTCGGTACAAAACGTGCGGGGTTATGGTAACCCATCACAGAATTACCGTATTCGTGGTTTTAAT CTGGATGGCGACGATATTTCATTCGGTGGTTTATTTGGTGTGCTACCGCGCCAGATTGTTTCTACCAGCATGGTTGAACG AGTCGAAGTCTTTAAAGGAGCTAATGCCTTTATTAACGGTATCTCGCCAAGTGGCAGTGGCGTTGGAGGCATGATTAATC TGGAACCTAAACGTGCCGGTGATACGCCATTGACTCGCGTTACTGTGGATTATGGTTCAGCAGCGCAAGTGGGGGGAGGG CTGGATGTCGGACGTCGCTATGGTGATAACGATCAATATGGCGTGCGGGTTAACGTACTGCATCGTGAAGGTGAAACGGC CATCAAAGATGAGAAGAACCGCCTAACCGCGGTGTCTACCGGCCTTGACTACCGTAGTGATCGCGCGCGGACCTCATTGG ATGTGGGTTACCAAAAGCAAACTATTCATCATATGCGTACCACCGTGGGTGTCGGTGCGGTGACCGTTATTCCTGAACCG CCGTCAACCACACTGAACTATGGTCAACCGTGGGTTTATACCGATTTGGAGACCACGTTTGGTATGTTGCGTAGCGAGTA TGATGTTAGCCAGAACTGGACGGTTTATGGTTCCATCGGGGCCAGCCATAACGAAGAAACGGGGCAATACGGCTCGCCAA TCCTGACGGATAACAGCGGCAATGCGACGATCAGCCGTTTATATGTGCCTTATATTTCTGAGTCTATTGCCGGTTTAGGT GGTATTCGTGGGCATTTTGATACTGGTTTTATCACCCATAAAGTGAATTTAGGGTATGCAACTAATTATCGGACAACCAA ATCTGCCTTTAATATGTCCGAGAGTATCAATACCAATATCTATAATCCGGGGGTCATACCTTTCCCGCCAACATCGACTA ATCCCAATTTTTATAGTCCCAACCAAGATCCTACGTTGACGAGTCAAGTTAGGGCTTCCGGCTTCTCATTGTCCGATACC TTATCGATGATGGATGACAAAGTTCAGCTGATGCTGGGGGTACGCCGCCAGGATGTCACTATCCGTAATTTTAATAATGG CGTACCAAACAGTGCTGGCTCATTAGATGCGATGAAAGTGACGCCAATTTATGGTGTGCTGGTGAGGCCATGGGAGAAGG TGTCTCTGTATGCCAACCATATTGAAGCGTTGGGGCCGGGTAAGTCCGCACCTTATAGCTACAGTAATGCGAGTGGCGTG ACGACGCCTGTGGCTAACGCAGGCCAAATCCCTGGTATTGTTCACTCCAAACAAAATGAAGTCGGCGTGAAATTCGATAA CCAGCGCTATGGCGGGACATTGGCTTTATTTGAAATTACCCGCCCGACGGGCACGGTTGATCCCGCGACCAATACTTATG GTTTCTATGGCGAACAGCGTAACCGGGGTGTTGAACTGAATGTCTTTGGTGAGCCGGTATTGGGTACTCGTTTGTTAGGG AGTGCGGTTTGGTTAGATCCTAAACTGACTAAAACCCAAAATGGGACGAACAACGGTAACTATGCTGTCGGTGTTGCTCG TTACCAATTAGTGTTCGGCGGCGAGTACGATATCCCTTCAGTAGAAGGGCTGACCGCCACTGGCACCCTGACACGTTCTG GATCCCAGTATGCCAATGATGCGAATACCTTGAAAATTAAACCGTGGACCCGCCTGGATCTGGGCGTGCGCTATACCATG CCAATGAAAGAGACTAACCTGATATGGCGCGCTAACCTTGAAAACGTGACTAACGAGCGTTATTGGGAATCGATAGAAGA TAGCGGCGTTTACCTGTATCAGGGCGATCCACGTACGCTGAAATTATCCGTCTCCATGGACTTCTGA
Upstream 100 bases:
>100_bases AGCGACTGAAATACAGAAAGGCTTGCATTGGCAAAGGTTATACGGATAATCCCCAATCCTTATGATAAGCATTCGTATTA CTGTTGGGTGTATAGGCTTT
Downstream 100 bases:
>100_bases TAAGTTGCGGCGACTTTGCTGAAATAGTGATTGAGTGAACTGTTGTTTACTAAACAGGTGCTTTACTGAAATCCCCCGGC GATTTGATATATCGCCGGGG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MGINTMNQSLSINTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKADTITVVGTPDTFRA GGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFN LDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSAAQVGGG LDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRTTVGVGAVTVIPEP PSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLG GIRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLTSQVRASGFSLSDT LSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPGKSAPYSYSNASGV TTPVANAGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLG SAVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRLDLGVRYTM PMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF
Sequences:
>Translated_768_residues MGINTMNQSLSINTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKADTITVVGTPDTFRA GGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFN LDGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSAAQVGGG LDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRTTVGVGAVTVIPEP PSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLG GIRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLTSQVRASGFSLSDT LSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPGKSAPYSYSNASGV TTPVANAGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLG SAVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRLDLGVRYTM PMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF >Mature_767_residues GINTMNQSLSINTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSAESSNKADTITVVGTPDTFRAG GNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTSKMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNL DGDDISFGGLFGVLPRQIVSTSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSAAQVGGGL DVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQTIHHMRTTVGVGAVTVIPEPP STTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIGASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLGG IRGHFDTGFITHKVNLGYATNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLTSQVRASGFSLSDTL SMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANHIEALGPGKSAPYSYSNASGVT TPVANAGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEITRPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLGS AVWLDPKLTKTQNGTNNGNYAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRLDLGVRYTMP MKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 82985; Mature: 82853
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINTMNQSLSINTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSA CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHCCCC ESSNKADTITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTS CCCCCCCEEEEEECCCCCCCCCCCCCCEEECCEECCCCEEEECCCCCCCCCCEEEEECHH KMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNLDGDDISFGGLFGVLPRQIV HHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH STSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSAAQVGGG HHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCC LDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQ CHHHHHCCCCCCCEEEEEEEEECCCCHHCCCCCEEEEEECCCCCCCCCCCCEECCCCHHH TIHHMRTTVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIG HHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEEEEECC ASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLGGIRGHFDTGFITHKVNLGYA CCCCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE TNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLTSQVRASGFSLSDT CCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH LSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANH HHHHHHHEEEHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHH IEALGPGKSAPYSYSNASGVTTPVANAGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEIT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEEEEEEEE RPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLGSAVWLDPKLTKTQNGTNNGN CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCCCCCCCCCCCC YAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRLDLGVRYTM EEEEEEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCCCCEEEECCCEEEECCEEEEC PMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF CCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECC >Mature Secondary Structure GINTMNQSLSINTEPKRSAPRLLCVMIGVALGSLSASSWSAAVANSTKTASAVAETNSA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHCCCC ESSNKADTITVVGTPDTFRAGGNDLIPTYLDGQVANGGRIGFLGQQDARNVPFNIIGYTS CCCCCCCEEEEEECCCCCCCCCCCCCCEEECCEECCCCEEEECCCCCCCCCCEEEEECHH KMIEDQQAATIADVVKNDASVQNVRGYGNPSQNYRIRGFNLDGDDISFGGLFGVLPRQIV HHHCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH STSMVERVEVFKGANAFINGISPSGSGVGGMINLEPKRAGDTPLTRVTVDYGSAAQVGGG HHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCC LDVGRRYGDNDQYGVRVNVLHREGETAIKDEKNRLTAVSTGLDYRSDRARTSLDVGYQKQ CHHHHHCCCCCCCEEEEEEEEECCCCHHCCCCCEEEEEECCCCCCCCCCCCEECCCCHHH TIHHMRTTVGVGAVTVIPEPPSTTLNYGQPWVYTDLETTFGMLRSEYDVSQNWTVYGSIG HHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCCEEEEECC ASHNEETGQYGSPILTDNSGNATISRLYVPYISESIAGLGGIRGHFDTGFITHKVNLGYA CCCCCCCCCCCCCEEECCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCCCEEEEEEECCEE TNYRTTKSAFNMSESINTNIYNPGVIPFPPTSTNPNFYSPNQDPTLTSQVRASGFSLSDT CCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH LSMMDDKVQLMLGVRRQDVTIRNFNNGVPNSAGSLDAMKVTPIYGVLVRPWEKVSLYANH HHHHHHHEEEHCCCCCCCEEEEECCCCCCCCCCCCCEEEECCEEEEEECCCHHHHHHHHH IEALGPGKSAPYSYSNASGVTTPVANAGQIPGIVHSKQNEVGVKFDNQRYGGTLALFEIT HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEEEEEEEE RPTGTVDPATNTYGFYGEQRNRGVELNVFGEPVLGTRLLGSAVWLDPKLTKTQNGTNNGN CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCCCCCCCCCCCC YAVGVARYQLVFGGEYDIPSVEGLTATGTLTRSGSQYANDANTLKIKPWTRLDLGVRYTM EEEEEEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCCCCEEEECCCEEEECCEEEEC PMKETNLIWRANLENVTNERYWESIEDSGVYLYQGDPRTLKLSVSMDF CCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]