BacMap

Definition	Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession	NC_010465
Length	4,689,441

Click here to switch to the map view.

The map label for this gene is dbpA [H]

Identifier: 170024671

GI number: 170024671

Start: 2677559

End: 2678941

Strand: Reverse

Name: dbpA [H]

Synonym: YPK_2446

Alternate gene names: 170024671

Gene position: 2678941-2677559 (Counterclockwise)

Preceding gene: 170024673

Following gene: 170024670

Centisome position: 57.13

GC content: 50.18

Gene sequence:

>1383_bases
GTGAGCACAACTTCCTTTTCTTCCCTGACACTGCCTGCTGAGCAGTTGTCCAATCTTAATGAACTTGGCTATACCGAGAT
GACCCCGGTACAAGCTGCGGTGTTACCCGCAATCCTCAACGGGCAGGATGTCCGGGCGAAGGCCAAAACCGGCAGCGGTA
AAACAGCCGCATTTGGCATTGGTTTGCTGGACAAAATAGCGGTAGGGGAATTTGTTACCCAAGCGCTGGTATTGTGCCCA
ACCCGAGAATTAGCAGACCAGGTCAGTAAAGAGCTGCGCCGTTTAGCACGGTTTACACAAAATATTAAAATTCTGACCCT
GTGTGGCGGCCAACCGATGGGCCACCAATTAGATTCTCTGGTCCATGCACCGCACATTGTCGTGGGTACGCCAGGGCGTA
TTCAGGAACATCTGCGCAAGAAAACGCTGGTACTTGATGAGTTGAAAACGCTGGTGTTGGATGAAGCTGATCGCATGTTG
GATATGGGTTTTTCCGATGCCATTGATGACGTGATTGCGTATACCCCTCCACAGCGGCAAACCTTGTTGTTCTCTGCCAC
CTACCCATCAGGTATTGAGCAGATCAGTGCACGAGTTCAGCGCCAACCATTGAATGTTGAAGTGGGTGATACCGATGAAG
AGCCCGCTATTGAACAGGTGTTTTTTGAAACGACTCGTGAGAAACGGCTGCCACTGCTGATCTCAGTTCTGAGCCATTAC
CAGCCGGCCTCTTGTGTGGTGTTCTGTAACACCAAAAAAGATTGTCAGAGCGTTTATGAGTCACTGGAATCACGTGGTAT
CAGTGTCTTGGCTTTGCACGGGGATTTAGAACAGCGTGATCGTGATCAGGTTCTGGTGCGTTTTGCCAATCGTAGCTGCC
GTGTGTTGGTGGCGACCGATGTTGCTGCTCGTGGTTTAGATATCAAGGATCTGGAGCTGGTCATTAACTTTGAATTGGCG
TTTGATCCCGAAATTCACGTACACCGCATTGGCCGTACCGGGCGCGCAGGGATGAGCGGCCTGGCCGTTAGCCTATGTAC
GCCACAGGAAATGGTACGTGCCCATACCATCGAAGATTATCTGCAAATAAAATTGAAATGGACACCTGCGGAACAGGTTA
GCCGTAGCACCAACATCATGCTGGAACCAGAAATGGTGACGTTATGCATTGACGGGGGGCGCAAAGCTAAAATTCGCCCT
GGTGACATTCTCGGGGCATTAACCGGTGATGCAGGGTTAACCGCCGCAGATGTGGGTAAGATTGATATGTTCCCGGTTCA
TGCCTATGTGGCTATCCGTAAAGCCAGTGCCAAGCGTGCGTTGCAACAATTGCAGCAAGGCAAAATCAAAGGTAAAAACT
GTAAAGCCCGTCTATTAAAATAA

Upstream 100 bases:

>100_bases
AATTCCGGCAACGCGCCTATCTCTGGTATTATCGCGGCAAAATCTTGCGCTTGCCTTCAGGCCATCGCTGCCATTCCATC
CAGTTATAAGAGTTACTGCC

Downstream 100 bases:

>100_bases
TCATTGCGGGGTGATGGCAGTTGCATCATCCCGATAAATCACCCTATACTGTGATTATATACAGTTATCTGTGAGCGAAA
AGGATGTATAGCAATGGCCG

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGIGLLDKIAVGEFVTQALVLCP
TRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRML
DMGFSDAIDDVIAYTPPQRQTLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKDLELVINFELA
FDPEIHVHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDYLQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRP
GDILGALTGDAGLTAADVGKIDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK

Sequences:

>Translated_460_residues
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGIGLLDKIAVGEFVTQALVLCP
TRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRML
DMGFSDAIDDVIAYTPPQRQTLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKDLELVINFELA
FDPEIHVHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDYLQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRP
GDILGALTGDAGLTAADVGKIDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
>Mature_459_residues
STTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGIGLLDKIAVGEFVTQALVLCPT
RELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRMLD
MGFSDAIDDVIAYTPPQRQTLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHYQ
PASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATDVAARGLDIKDLELVINFELAF
DPEIHVHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDYLQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRPG
DILGALTGDAGLTAADVGKIDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=34.1463414634146, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=37.2549019607843, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=37.2549019607843, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI31542656, Length=376, Percent_Identity=35.9042553191489, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI262118318, Length=348, Percent_Identity=39.9425287356322, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI216548263, Length=348, Percent_Identity=39.9425287356322, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI262231852, Length=348, Percent_Identity=39.9425287356322, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI13518015, Length=348, Percent_Identity=39.9425287356322, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI164664518, Length=368, Percent_Identity=31.5217391304348, Blast_Score=221, Evalue=9e-58,
Organism=Homo sapiens, GI50659095, Length=381, Percent_Identity=36.4829396325459, Blast_Score=215, Evalue=9e-56,
Organism=Homo sapiens, GI41327773, Length=346, Percent_Identity=36.4161849710983, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=34.7258485639687, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI301171467, Length=371, Percent_Identity=36.9272237196765, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI87196351, Length=371, Percent_Identity=36.9272237196765, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI301171475, Length=371, Percent_Identity=36.9272237196765, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI169881239, Length=371, Percent_Identity=36.9272237196765, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI13514809, Length=371, Percent_Identity=36.9272237196765, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI224593278, Length=354, Percent_Identity=37.8531073446328, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.1123595505618, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI4503529, Length=371, Percent_Identity=35.3099730458221, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI20149629, Length=371, Percent_Identity=32.6145552560647, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI148613856, Length=363, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI38201710, Length=363, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=8e-52,
Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=33.0532212885154, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=33.509234828496, Blast_Score=199, Evalue=6e-51,
Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=34.5013477088949, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=33.7837837837838, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI38327634, Length=363, Percent_Identity=35.5371900826446, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=34.4632768361582, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=34.4632768361582, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI13514831, Length=357, Percent_Identity=34.1736694677871, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=31.9209039548023, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI21040371, Length=387, Percent_Identity=28.6821705426357, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI4758112, Length=376, Percent_Identity=28.1914893617021, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI18375623, Length=376, Percent_Identity=28.1914893617021, Blast_Score=185, Evalue=6e-47,
Organism=Homo sapiens, GI41327779, Length=375, Percent_Identity=32.2666666666667, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=31.1797752808989, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI55749865, Length=344, Percent_Identity=30.2325581395349, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI41327776, Length=370, Percent_Identity=31.8918918918919, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI164419732, Length=368, Percent_Identity=29.0760869565217, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=31.0055865921788, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=30, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=29.4710327455919, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI62241022, Length=338, Percent_Identity=31.0650887573964, Blast_Score=153, Evalue=2e-37,
Organism=Homo sapiens, GI62241024, Length=338, Percent_Identity=30.4733727810651, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=29.5454545454545, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI38569503, Length=366, Percent_Identity=28.9617486338798, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI38569505, Length=366, Percent_Identity=28.9617486338798, Blast_Score=137, Evalue=3e-32,
Organism=Homo sapiens, GI4826686, Length=342, Percent_Identity=29.2397660818713, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=34.2679127725857, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI154759257, Length=411, Percent_Identity=27.4939172749392, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI17505907, Length=225, Percent_Identity=31.5555555555556, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI20336298, Length=225, Percent_Identity=31.5555555555556, Blast_Score=100, Evalue=4e-21,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=69.0631808278867, Blast_Score=641, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=363, Percent_Identity=40.495867768595, Blast_Score=268, Evalue=8e-73,
Organism=Escherichia coli, GI1787016, Length=366, Percent_Identity=40.1639344262295, Blast_Score=242, Evalue=3e-65,
Organism=Escherichia coli, GI1790214, Length=376, Percent_Identity=35.3723404255319, Blast_Score=199, Evalue=3e-52,
Organism=Escherichia coli, GI1788930, Length=373, Percent_Identity=35.656836461126, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI48994977, Length=342, Percent_Identity=23.6842105263158, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71995724, Length=367, Percent_Identity=35.149863760218, Blast_Score=242, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17507121, Length=367, Percent_Identity=35.149863760218, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=34.0599455040872, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI115532546, Length=376, Percent_Identity=33.5106382978723, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17552114, Length=364, Percent_Identity=31.043956043956, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI115532548, Length=395, Percent_Identity=32.6582278481013, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=36.6946778711485, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=33.5078534031414, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=34.9862258953168, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=34.3832020997375, Blast_Score=201, Evalue=5e-52,
Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=37.0056497175141, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=37.0056497175141, Blast_Score=200, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=37.0056497175141, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI86570094, Length=345, Percent_Identity=36.8115942028986, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=384, Percent_Identity=29.6875, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=363, Percent_Identity=36.6391184573003, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI115533224, Length=362, Percent_Identity=35.3591160220994, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17507881, Length=398, Percent_Identity=31.6582914572864, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17507879, Length=398, Percent_Identity=33.1658291457286, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI71999646, Length=334, Percent_Identity=35.9281437125749, Blast_Score=191, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=34.2318059299191, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI71999644, Length=334, Percent_Identity=35.9281437125749, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=35.989010989011, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=31.1224489795918, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=31.1224489795918, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=31.1224489795918, Blast_Score=181, Evalue=6e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=363, Percent_Identity=33.8842975206612, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17537549, Length=342, Percent_Identity=33.0409356725146, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI193206561, Length=356, Percent_Identity=29.2134831460674, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17509811, Length=355, Percent_Identity=30.4225352112676, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=29.2011019283747, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=31.5926892950392, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17507641, Length=390, Percent_Identity=31.5384615384615, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=31.2997347480106, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=357, Percent_Identity=28.0112044817927, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=30.3763440860215, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=200, Percent_Identity=34, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI25148203, Length=404, Percent_Identity=25, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17508543, Length=368, Percent_Identity=28.5326086956522, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=382, Percent_Identity=28.7958115183246, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI25148291, Length=329, Percent_Identity=27.6595744680851, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=39.2156862745098, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25148205, Length=328, Percent_Identity=23.780487804878, Blast_Score=88, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320224, Length=374, Percent_Identity=33.4224598930481, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324217, Length=358, Percent_Identity=36.5921787709497, Blast_Score=222, Evalue=9e-59,
Organism=Saccharomyces cerevisiae, GI6321856, Length=383, Percent_Identity=36.0313315926893, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=31.6076294277929, Blast_Score=212, Evalue=1e-55,
Organism=Saccharomyces cerevisiae, GI6321360, Length=362, Percent_Identity=37.292817679558, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=36.8271954674221, Blast_Score=210, Evalue=4e-55,
Organism=Saccharomyces cerevisiae, GI6324778, Length=368, Percent_Identity=35.3260869565217, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6321963, Length=379, Percent_Identity=35.0923482849604, Blast_Score=202, Evalue=8e-53,
Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=34.3575418994413, Blast_Score=200, Evalue=4e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=36.3888888888889, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=32.3369565217391, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=32.3369565217391, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=34.9030470914127, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=34.7107438016529, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=357, Percent_Identity=31.3725490196078, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=28.125, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=354, Percent_Identity=33.3333333333333, Blast_Score=179, Evalue=9e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=30.958230958231, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6319714, Length=388, Percent_Identity=29.1237113402062, Blast_Score=159, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=359, Percent_Identity=32.5905292479109, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=401, Percent_Identity=27.6807980049875, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=25.41567695962, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=37.17277486911, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=394, Percent_Identity=26.1421319796954, Blast_Score=100, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=28.2608695652174, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24645031, Length=367, Percent_Identity=34.3324250681199, Blast_Score=232, Evalue=3e-61,
Organism=Drosophila melanogaster, GI24584399, Length=355, Percent_Identity=36.3380281690141, Blast_Score=222, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24662330, Length=353, Percent_Identity=36.8271954674221, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI21356161, Length=398, Percent_Identity=35.427135678392, Blast_Score=216, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17136814, Length=379, Percent_Identity=36.1477572559367, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24642151, Length=381, Percent_Identity=34.1207349081365, Blast_Score=211, Evalue=1e-54,
Organism=Drosophila melanogaster, GI24583281, Length=366, Percent_Identity=31.6939890710383, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24583279, Length=366, Percent_Identity=31.6939890710383, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI28574962, Length=400, Percent_Identity=33.25, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=37.3983739837398, Blast_Score=207, Evalue=9e-54,
Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=34.7368421052632, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=34.8314606741573, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI28575014, Length=361, Percent_Identity=34.9030470914127, Blast_Score=202, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=7e-52,
Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI24582080, Length=370, Percent_Identity=33.7837837837838, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24582078, Length=370, Percent_Identity=33.7837837837838, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17136248, Length=370, Percent_Identity=33.7837837837838, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24582075, Length=370, Percent_Identity=33.7837837837838, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=32.6145552560647, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585582, Length=355, Percent_Identity=33.2394366197183, Blast_Score=199, Evalue=2e-51,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=33.7874659400545, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI28571808, Length=359, Percent_Identity=33.1476323119777, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI28571809, Length=359, Percent_Identity=33.1476323119777, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI24581954, Length=388, Percent_Identity=29.8969072164948, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24581952, Length=388, Percent_Identity=29.8969072164948, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24581956, Length=388, Percent_Identity=29.8969072164948, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI21355559, Length=393, Percent_Identity=33.0788804071247, Blast_Score=169, Evalue=5e-42,
Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=33.5443037974684, Blast_Score=161, Evalue=7e-40,
Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=29.6495956873315, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24666101, Length=367, Percent_Identity=30.2452316076294, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI17647335, Length=355, Percent_Identity=28.4507042253521, Blast_Score=144, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24668515, Length=335, Percent_Identity=29.8507462686567, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24643725, Length=420, Percent_Identity=25.4761904761905, Blast_Score=128, Evalue=8e-30,
Organism=Drosophila melanogaster, GI19920478, Length=352, Percent_Identity=29.5454545454545, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI20130173, Length=320, Percent_Identity=31.5625, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI17136666, Length=408, Percent_Identity=27.9411764705882, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571338, Length=226, Percent_Identity=32.7433628318584, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI18859659, Length=226, Percent_Identity=32.7433628318584, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=22, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 50511; Mature: 50380

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGI
CCCCCCCCEECCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEC
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
VHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRMLDMGFSDAIDDVIAYTPPQRQ
HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
EEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEC
VAARGLDIKDLELVINFELAFDPEIHVHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDY
HHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCE
LQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
EEEEEEECCHHHHCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
EEEEEEHHHEEHHHHHHHHHHHHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
STTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKTGSGKTAAFGI
CCCCCCCEECCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEC
GLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGHQLDSL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
VHAPHIVVGTPGRIQEHLRKKTLVLDELKTLVLDEADRMLDMGFSDAIDDVIAYTPPQRQ
HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
TLLFSATYPSGIEQISARVQRQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSHY
EEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCC
QPASCVVFCNTKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEC
VAARGLDIKDLELVINFELAFDPEIHVHRIGRTGRAGMSGLAVSLCTPQEMVRAHTIEDY
HHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCE
LQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAADVGK
EEEEEEECCHHHHCCCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC
IDMFPVHAYVAIRKASAKRALQQLQQGKIKGKNCKARLLK
EEEEEEHHHEEHHHHHHHHHHHHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]