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The map label for this gene is flgF [H]

Identifier: 170024646

GI number: 170024646

Start: 2654029

End: 2654784

Strand: Reverse

Name: flgF [H]

Synonym: YPK_2421

Alternate gene names: 170024646

Gene position: 2654784-2654029 (Counterclockwise)

Preceding gene: 170024647

Following gene: 170024645

Centisome position: 56.61

GC content: 56.48

Gene sequence:

>756_bases
ATGGATCACGCAATATATACCGCAATGGGGGCTGCCCGGCAGTCTCTGGAGTTGCAGGCCGTTACCGCCAACAATTTGGC
GAACGCCTCTACGCCAGGCTTTCGTGCGCAATTGGCTGCGATGCGCGCGGTACCCATTGATGGGCCAAGTCTGGCCACCC
GCACGATGGTCACCACATCAACTCCCGGTGTGGATATCAGCCAGGGGACGATGAATTTCAGTGGTCGCCCGCTGGATGTT
GCCTTGCAGCAGGACGGCTATCTGGCGGTACAACTGCCCGATGGCAGCGAAGCCTACACGCGCAACGGTAATATTCAGAT
TTCTGCTAACGGGCAGATGACGGTACAGGGCTACCCATTGATGGGGGATAACGGCCCGATTGACGTCCCGCCCCAAGCAG
CAGTCACTATTGCGGCGGATGGCACTATCTCGGCGCTGAATGCCGGTGATTCACCAAACACCATTGCGCAACTGGGTCAG
ATCAAACGGGTTCAGGCGACGGCGGGTGAAATGATGCACGGCGATGATGGCTTGTTCCATTTGACCCCGGAGACTCAGCA
GGCGCGGGGCGCGCAATTGCCCAATGATCCGCTCGTAAAAATCATGCCGGGGGTACTGGAAGGCAGTAACGTGAAAGCCG
TTGAAGCCATGACGGACATGATTGCCAACGCCCGCAGTTTCGAAATGCAAATGAAAGTCATCCAGAGCGTGGATGAAAAC
GAACAGAGCGCGAACCAACTGTTAGCAATGAGTTAA

Upstream 100 bases:

>100_bases
GCAACGTAACTATCAGTCCAACGCGCAGACCATCAAAACCCAAGATCAGATCTTACAAACTCTGGTTAGCCTGCGTTAAT
CGTACTGACGGGAAGAGCTC

Downstream 100 bases:

>100_bases
GCGCGCAGGCGCAGAGGAATGACTGATGATCCGATCATTATGGATTGCCAAGACCGGCTTGGACGCCCAACAGACGAATA
TGGATGTGATCGCCAATAAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDEN
EQSANQLLAMS

Sequences:

>Translated_251_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDEN
EQSANQLLAMS
>Mature_251_residues
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTSTPGVDISQGTMNFSGRPLDV
ALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPLMGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQ
IKRVQATAGEMMHGDDGLFHLTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDEN
EQSANQLLAMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=251, Percent_Identity=66.5338645418327, Blast_Score=338, Evalue=2e-94,
Organism=Escherichia coli, GI1787318, Length=250, Percent_Identity=32.4, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26310; Mature: 26310

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTS
CCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEEEC
TPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPL
CCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCEEEEECCEEEEEEEEE
MGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDGLFH
ECCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCEEE
LTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDEN
ECCCHHHHCCCCCCCCCHHEECCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQSANQLLAMS
HHHHHHEEECC
>Mature Secondary Structure
MDHAIYTAMGAARQSLELQAVTANNLANASTPGFRAQLAAMRAVPIDGPSLATRTMVTTS
CCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEEEC
TPGVDISQGTMNFSGRPLDVALQQDGYLAVQLPDGSEAYTRNGNIQISANGQMTVQGYPL
CCCCEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCEEECCCEEEEECCEEEEEEEEE
MGDNGPIDVPPQAAVTIAADGTISALNAGDSPNTIAQLGQIKRVQATAGEMMHGDDGLFH
ECCCCCCCCCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCEEE
LTPETQQARGAQLPNDPLVKIMPGVLEGSNVKAVEAMTDMIANARSFEMQMKVIQSVDEN
ECCCHHHHCCCCCCCCCHHEECCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQSANQLLAMS
HHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]