| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is nanM [H]
Identifier: 170024587
GI number: 170024587
Start: 2595798
End: 2596976
Strand: Reverse
Name: nanM [H]
Synonym: YPK_2362
Alternate gene names: 170024587
Gene position: 2596976-2595798 (Counterclockwise)
Preceding gene: 170024589
Following gene: 170024585
Centisome position: 55.38
GC content: 50.64
Gene sequence:
>1179_bases ATGACCCAGTTATACCCACAATATAAGAAACAATTGACGACAAAAATAGTGCTGTTTAGTGCGTTATCTCTATTGATGAT GGCATCGCTACCTAATACCTATGCGGAACAATATCCTGACGTTCCGGTACCATTTAAAAACGGTACGGGTGGCAAAGTGG AGAACAGCTTATATGTGGGGCTGGGGAGCGCCGGTGTATCGTGGTTCCGTCTGGATACAGATAAAACCGGTGCTGGGTGG CAGAAAGTGGCTAATTTCCCAGGCCAGCCTCGTGAACAGGCTGTGACGGTGGTATTGGCAGGGAAACTGTACGTGTTCGG TGGGGTGGGGAAAACGAACGCCAACGATACCCAAGTACGGGCACTGGATGATGCGTATCGTTTTGATCCACAAACTAATC AATGGCAGCAACTGGCTACCCGCGCTCCCCGAGGTCTGGTGGGGACCGTGGCCACGACACTGGACGGCTCCCAGGCGGTG CTGTTAGGCGGTGTAAATAAAGCGATTTTTGACGGTTATTTTACTGATCTTGCGTCAGCCGGAAGTGATGAAGTACGCAA GAATGCGGTAATAAACGCCTATTTTAATCAGGCTCCGGCTGATTATTTCTACAACCGCGATGTCCTTATCTATGATCCGC AAAAAAATCAGTGGAAAAGCGGCGGTTTGCTGCCATTTTTAGGGACAGCCGGGTCAGCCATCAGCCGCATGGATAATCGC TTGATATTAATCAATGGCGAAATTAAACCTGGTTTACGCACAGCGGCTGTATGGCAGGGGCTAATGCAAGGGAATGTACT GGAGTGGCAGCCACAACCGGACTTAATCGGAGCTGAAACGGGATCCGCACAGGAAGGATTGGCTGGCGCATTTTCCGGTA TCAGTCATAAAACAGTCTTAGTCGCCGGAGGCGCTAATTTCCCTGGTGCCTGGAAGCAATTTAATCGCGGTCACCTATAT GCTCACCAAGGGCTGGAAAAACAGTGGCACCAGCAGGTGTATGCGTTGGTCGATAATCAGTGGAGAATCGCCGGGAAGTT GCCTCAACCGCTGGGTTATGGCGTCTCTATTCAGGGGCCAGATAAGGTCATTTTGATTGGCGGCGAAACCACCGGAGGTA CGGCCACTTCAGCGGTCACACAGCTATCTTGGCAGGGAGGAAAACTGCATATTGAGTAA
Upstream 100 bases:
>100_bases TGACTCCATAATTAAATTGTTAATGGAGTTTTGCTCTCCTTGGGAGCCATACTGCTAACATTATGGTTCCACCACGATGA ATTAATGAGGAACACTGCTG
Downstream 100 bases:
>100_bases ATTGAGGTTGAAATGAATGAAAGAACCTTATTCAGTAGCGGGTTGTCGGCGTTATGGAATAAGTGATTAGAGGGGGAAAT AAAACGGTACCAGAACACCT
Product: N-acetylneuraminic acid mutarotase
Products: NA
Alternate protein names: N-acetylneuraminate mutarotase; Neu5Ac mutarotase; Sialic acid epimerase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTQLYPQYKKQLTTKIVLFSALSLLMMASLPNTYAEQYPDVPVPFKNGTGGKVENSLYVGLGSAGVSWFRLDTDKTGAGW QKVANFPGQPREQAVTVVLAGKLYVFGGVGKTNANDTQVRALDDAYRFDPQTNQWQQLATRAPRGLVGTVATTLDGSQAV LLGGVNKAIFDGYFTDLASAGSDEVRKNAVINAYFNQAPADYFYNRDVLIYDPQKNQWKSGGLLPFLGTAGSAISRMDNR LILINGEIKPGLRTAAVWQGLMQGNVLEWQPQPDLIGAETGSAQEGLAGAFSGISHKTVLVAGGANFPGAWKQFNRGHLY AHQGLEKQWHQQVYALVDNQWRIAGKLPQPLGYGVSIQGPDKVILIGGETTGGTATSAVTQLSWQGGKLHIE
Sequences:
>Translated_392_residues MTQLYPQYKKQLTTKIVLFSALSLLMMASLPNTYAEQYPDVPVPFKNGTGGKVENSLYVGLGSAGVSWFRLDTDKTGAGW QKVANFPGQPREQAVTVVLAGKLYVFGGVGKTNANDTQVRALDDAYRFDPQTNQWQQLATRAPRGLVGTVATTLDGSQAV LLGGVNKAIFDGYFTDLASAGSDEVRKNAVINAYFNQAPADYFYNRDVLIYDPQKNQWKSGGLLPFLGTAGSAISRMDNR LILINGEIKPGLRTAAVWQGLMQGNVLEWQPQPDLIGAETGSAQEGLAGAFSGISHKTVLVAGGANFPGAWKQFNRGHLY AHQGLEKQWHQQVYALVDNQWRIAGKLPQPLGYGVSIQGPDKVILIGGETTGGTATSAVTQLSWQGGKLHIE >Mature_391_residues TQLYPQYKKQLTTKIVLFSALSLLMMASLPNTYAEQYPDVPVPFKNGTGGKVENSLYVGLGSAGVSWFRLDTDKTGAGWQ KVANFPGQPREQAVTVVLAGKLYVFGGVGKTNANDTQVRALDDAYRFDPQTNQWQQLATRAPRGLVGTVATTLDGSQAVL LGGVNKAIFDGYFTDLASAGSDEVRKNAVINAYFNQAPADYFYNRDVLIYDPQKNQWKSGGLLPFLGTAGSAISRMDNRL ILINGEIKPGLRTAAVWQGLMQGNVLEWQPQPDLIGAETGSAQEGLAGAFSGISHKTVLVAGGANFPGAWKQFNRGHLYA HQGLEKQWHQQVYALVDNQWRIAGKLPQPLGYGVSIQGPDKVILIGGETTGGTATSAVTQLSWQGGKLHIE
Specific function: Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, whic
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 Kelch repeats [H]
Homologues:
Organism=Escherichia coli, GI87082419, Length=373, Percent_Identity=39.142091152815, Blast_Score=283, Evalue=1e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013089 - InterPro: IPR015915 - InterPro: IPR006652 - InterPro: IPR019936 [H]
Pfam domain/function: PF01344 Kelch_1 [H]
EC number: NA
Molecular weight: Translated: 42321; Mature: 42190
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLYPQYKKQLTTKIVLFSALSLLMMASLPNTYAEQYPDVPVPFKNGTGGKVENSLYVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEE LGSAGVSWFRLDTDKTGAGWQKVANFPGQPREQAVTVVLAGKLYVFGGVGKTNANDTQVR ECCCCCEEEEEECCCCCCCHHHHHCCCCCCHHHEEEEEEECEEEEEECCCCCCCCCCEEE ALDDAYRFDPQTNQWQQLATRAPRGLVGTVATTLDGSQAVLLGGVNKAIFDGYFTDLASA EEHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCC GSDEVRKNAVINAYFNQAPADYFYNRDVLIYDPQKNQWKSGGLLPFLGTAGSAISRMDNR CCHHHHHCCEEEEHHCCCCCHHEECCCEEEECCCCCCCCCCCCCEECCCCCHHHHHCCCE LILINGEIKPGLRTAAVWQGLMQGNVLEWQPQPDLIGAETGSAQEGLAGAFSGISHKTVL EEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECCCCCCHHCHHHHHCCCCCEEEE VAGGANFPGAWKQFNRGHLYAHQGLEKQWHQQVYALVDNQWRIAGKLPQPLGYGVSIQGP EECCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCC DKVILIGGETTGGTATSAVTQLSWQGGKLHIE CEEEEEECCCCCCCHHHHHHEEECCCCEEEEC >Mature Secondary Structure TQLYPQYKKQLTTKIVLFSALSLLMMASLPNTYAEQYPDVPVPFKNGTGGKVENSLYVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEE LGSAGVSWFRLDTDKTGAGWQKVANFPGQPREQAVTVVLAGKLYVFGGVGKTNANDTQVR ECCCCCEEEEEECCCCCCCHHHHHCCCCCCHHHEEEEEEECEEEEEECCCCCCCCCCEEE ALDDAYRFDPQTNQWQQLATRAPRGLVGTVATTLDGSQAVLLGGVNKAIFDGYFTDLASA EEHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCC GSDEVRKNAVINAYFNQAPADYFYNRDVLIYDPQKNQWKSGGLLPFLGTAGSAISRMDNR CCHHHHHCCEEEEHHCCCCCHHEECCCEEEECCCCCCCCCCCCCEECCCCCHHHHHCCCE LILINGEIKPGLRTAAVWQGLMQGNVLEWQPQPDLIGAETGSAQEGLAGAFSGISHKTVL EEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCEEECCCCCCHHCHHHHHCCCCCEEEE VAGGANFPGAWKQFNRGHLYAHQGLEKQWHQQVYALVDNQWRIAGKLPQPLGYGVSIQGP EECCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEECCC DKVILIGGETTGGTATSAVTQLSWQGGKLHIE CEEEEEECCCCCCCHHHHHHEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA