| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024514
Identifier: 170024514
GI number: 170024514
Start: 2539473
End: 2540042
Strand: Direct
Name: 170024514
Synonym: YPK_2289
Alternate gene names: NA
Gene position: 2539473-2540042 (Clockwise)
Preceding gene: 170024513
Following gene: 170024515
Centisome position: 54.15
GC content: 34.56
Gene sequence:
>570_bases ATGAAAAAATCAGTTAAATTATCTGTAGCAATATTTTATTTATTCCTGTGTATACCTGTTTTTTCTCTTCCTATTTTTAA TGAGAGTCTGCCTGCAGATGACCCCACGCAGGAAGCGGCTCTACTTGTGCAGAAATTAATAACATCTGAAGATAGTGAAA AAAGTGAAATTTTCAAACAGTTTAAAAATCTGTTAGATGAAAACCCAGAAAATATTAATGTCAGAAAAATGTACATAAAT AGCCTACTTGCTGATAGATACTATGCAGAAGGGCTACAAGAACTTGAGATACTCAACAAAAAGCATTTCACCCGAACTGA CTTATTGACTGAGTGCATGGTAAAAGAAAGATTAGGGAAAAGAGATGATGAATGCTACAGGCAGGTTATTCACCTCTCAG AACAACAACAATCGATTGACTCTGATTACTTGACTGCACTTTTTTTCGCTAATGATAAACGATTCGAACCTTTAAAAAAT CGCTTGATTAAAGAGGGGGTATTTAAGGAAAGTGACTTGTTAATATTCACCTTAAGCAAAGAGACGATGTTACGAGAGTT CTATCCATAG
Upstream 100 bases:
>100_bases CTGGGTATTTTTTACATACAGGATATACCGGAATAATCAGGCCATTCCCTGGCAGTTTGACCAGACAAATCACATTAAAT AAATTTTAGGATAATTTATT
Downstream 100 bases:
>100_bases TTTATGGGTGCCGGAAGATTACAGTCTCAACAGTACTAAACATTGAGTATTCGGCTTATCAGGTTTGGCAGGCAGTCAAA CAGGTACTCAGTAGCTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADDPTQEAALLVQKLITSEDSEKSEIFKQFKNLLDENPENINVRKMYIN SLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGKRDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKN RLIKEGVFKESDLLIFTLSKETMLREFYP
Sequences:
>Translated_189_residues MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADDPTQEAALLVQKLITSEDSEKSEIFKQFKNLLDENPENINVRKMYIN SLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGKRDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKN RLIKEGVFKESDLLIFTLSKETMLREFYP >Mature_189_residues MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADDPTQEAALLVQKLITSEDSEKSEIFKQFKNLLDENPENINVRKMYIN SLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGKRDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKN RLIKEGVFKESDLLIFTLSKETMLREFYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22220; Mature: 22220
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADDPTQEAALLVQKLITSEDSEKSEIFKQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH FKNLLDENPENINVRKMYINSLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC RDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKNRLIKEGVFKESDLLIFTLSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECH ETMLREFYP HHHHHHCCC >Mature Secondary Structure MKKSVKLSVAIFYLFLCIPVFSLPIFNESLPADDPTQEAALLVQKLITSEDSEKSEIFKQ CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH FKNLLDENPENINVRKMYINSLLADRYYAEGLQELEILNKKHFTRTDLLTECMVKERLGK HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC RDDECYRQVIHLSEQQQSIDSDYLTALFFANDKRFEPLKNRLIKEGVFKESDLLIFTLSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECH ETMLREFYP HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA