| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yeaH [C]
Identifier: 170024336
GI number: 170024336
Start: 2330552
End: 2331826
Strand: Direct
Name: yeaH [C]
Synonym: YPK_2102
Alternate gene names: 170024336
Gene position: 2330552-2331826 (Clockwise)
Preceding gene: 170024335
Following gene: 170024337
Centisome position: 49.7
GC content: 48.08
Gene sequence:
>1275_bases ATGGGCTATTTCATTGACAGACGACTTAACGGCAAGAATAAAAGCATGGTGAATCGCCAGCGCTTTTTACGCCGCTATAA GTCGCAAATTAAACAATCGATTGCCGATGCCATCAACAAACGGTCGGTAACCGATATAGAAAGTGGCGAGTCAGTTTCAA TACCTATCGACGACATCAATGAGCCAATGTTTCATCAAGGCAATGGTGGGTTGCGCCATCGAGTGCACCCTGGCAATGAC CACTTTATCACCAATGACCGGGTAGACCGCCCTCAAGGCGGCGGAGGTGGCGGTAGCGGTCAAGGTAATGCCGGTAAAGA TGGTGAAGGTGAGGATGAGTTTGTCTTTCAGATCTCTAAAGATGAATACCTGGACTTACTGTTTGAAGATCTCGCCCTGC CCAATCTGAAAAGAAACCAGTACAAACAGCTGGCAGAATTTAAGACACACCGAGCGGGATATACCTCTAATGGTGTGCCA GCCAATATCAGTGTGGTACGTTCACTGCAGAATTCACTGGCTCGCCGGACTGCGATGACCGCCAGCAAACGGCGCGAGTT GCGTGAACTGGAGGCGGCGCTTACTGTGCTGGAGAATTCTGAGCCAGCGCAATTGTTAGAAGAAGAGCGCTTACGCAAGG CGATTACCGAGTTAAAGCAAAAAATTGCTCGGGTTCCGTTTATTGATACCTTTGATTTACGCTATAAAAATTACGAGCGT CGCCCTGAGCCCTCCAGTCAAGCCGTCATGTTCTGCTTGATGGATGTCTCGGGATCCATGGACCAAGCCACGAAAGATAT GGCTAAGCGGTTTTATATTCTGCTCTATCTCTTCCTGAGCCGGACCTATAAAAACGTCGATGTGGTGTATATCCGCCACC ATACGCAAGCCAAAGAAGTGGATGAACAGGAGTTTTTCTACTCGCAAGAAACCGGCGGAACCATCGTCTCCAGTGCACTG AAATTGATGGATGAAGTGGTTCAAGAGCGTTATAACCCGGCGCAGTGGAACATTTATGCCGCTCAGGCTTCTGATGGTGA TAACTGGGCAGATGACTCACCGTTGTGCCATGAATTACTGGCCAAAAAGATTCTACCGGTGGTGCGTTACTACAGTTATA TCGAGATAACCCGCCGCGCTCATCAAACGTTATGGCGCGAGTATGAAGATCTGGAAGAGAAATTCGACAACTTTGCCATA CAACATATTCGTGAACCCGAAGATATTTATCCCGTCTTCCGTGAGTTGTTCCACAAACAGACCGTAGATAATTAG
Upstream 100 bases:
>100_bases TACGTCCTTGGCGTTGCCGCTAACCATGCTGTAACGCCAAGGACAAAGGGACAGTGTGAGGCCGGTGGATGCAAGCTTGG CAAAGTCGTTTGGGGGATAT
Downstream 100 bases:
>100_bases CAGCAATATCAGCCGGTTAATTTTTTCTTGTTCAGAAAGCATTTTCCGGCTTTTTCTATGGGCTAAAATTATCACTTCCC GCTATTTGTGGATCACGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MGYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIADAINKRSVTDIESGESVSIPIDDINEPMFHQGNGGLRHRVHPGND HFITNDRVDRPQGGGGGGSGQGNAGKDGEGEDEFVFQISKDEYLDLLFEDLALPNLKRNQYKQLAEFKTHRAGYTSNGVP ANISVVRSLQNSLARRTAMTASKRRELRELEAALTVLENSEPAQLLEEERLRKAITELKQKIARVPFIDTFDLRYKNYER RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSAL KLMDEVVQERYNPAQWNIYAAQASDGDNWADDSPLCHELLAKKILPVVRYYSYIEITRRAHQTLWREYEDLEEKFDNFAI QHIREPEDIYPVFRELFHKQTVDN
Sequences:
>Translated_424_residues MGYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIADAINKRSVTDIESGESVSIPIDDINEPMFHQGNGGLRHRVHPGND HFITNDRVDRPQGGGGGGSGQGNAGKDGEGEDEFVFQISKDEYLDLLFEDLALPNLKRNQYKQLAEFKTHRAGYTSNGVP ANISVVRSLQNSLARRTAMTASKRRELRELEAALTVLENSEPAQLLEEERLRKAITELKQKIARVPFIDTFDLRYKNYER RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSAL KLMDEVVQERYNPAQWNIYAAQASDGDNWADDSPLCHELLAKKILPVVRYYSYIEITRRAHQTLWREYEDLEEKFDNFAI QHIREPEDIYPVFRELFHKQTVDN >Mature_423_residues GYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIADAINKRSVTDIESGESVSIPIDDINEPMFHQGNGGLRHRVHPGNDH FITNDRVDRPQGGGGGGSGQGNAGKDGEGEDEFVFQISKDEYLDLLFEDLALPNLKRNQYKQLAEFKTHRAGYTSNGVPA NISVVRSLQNSLARRTAMTASKRRELRELEAALTVLENSEPAQLLEEERLRKAITELKQKIARVPFIDTFDLRYKNYERR PEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEVDEQEFFYSQETGGTIVSSALK LMDEVVQERYNPAQWNIYAAQASDGDNWADDSPLCHELLAKKILPVVRYYSYIEITRRAHQTLWREYEDLEEKFDNFAIQ HIREPEDIYPVFRELFHKQTVDN
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=421, Percent_Identity=85.2731591448931, Blast_Score=746, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 49081; Mature: 48950
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIADAINKRSVTDIESGESVSIPIDDIN CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC EPMFHQGNGGLRHRVHPGNDHFITNDRVDRPQGGGGGGSGQGNAGKDGEGEDEFVFQISK CCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH DEYLDLLFEDLALPNLKRNQYKQLAEFKTHRAGYTSNGVPANISVVRSLQNSLARRTAMT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASKRRELRELEAALTVLENSEPAQLLEEERLRKAITELKQKIARVPFIDTFDLRYKNYER HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHCCCCC RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHC DEQEFFYSQETGGTIVSSALKLMDEVVQERYNPAQWNIYAAQASDGDNWADDSPLCHELL CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AKKILPVVRYYSYIEITRRAHQTLWREYEDLEEKFDNFAIQHIREPEDIYPVFRELFHKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVDN CCCC >Mature Secondary Structure GYFIDRRLNGKNKSMVNRQRFLRRYKSQIKQSIADAINKRSVTDIESGESVSIPIDDIN CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHCC EPMFHQGNGGLRHRVHPGNDHFITNDRVDRPQGGGGGGSGQGNAGKDGEGEDEFVFQISK CCCEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECH DEYLDLLFEDLALPNLKRNQYKQLAEFKTHRAGYTSNGVPANISVVRSLQNSLARRTAMT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ASKRRELRELEAALTVLENSEPAQLLEEERLRKAITELKQKIARVPFIDTFDLRYKNYER HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHCCCCC RPEPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLSRTYKNVDVVYIRHHTQAKEV CCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHC DEQEFFYSQETGGTIVSSALKLMDEVVQERYNPAQWNIYAAQASDGDNWADDSPLCHELL CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHH AKKILPVVRYYSYIEITRRAHQTLWREYEDLEEKFDNFAIQHIREPEDIYPVFRELFHKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH TVDN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA